Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D07
(999 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 199 2e-51
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 134 9e-32
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 134 9e-32
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 66 3e-11
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 66 3e-11
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 66 3e-11
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 64 1e-10
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 64 1e-10
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 64 1e-10
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 64 2e-10
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 63 2e-10
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 63 2e-10
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 63 2e-10
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 63 2e-10
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 63 3e-10
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 63 3e-10
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 63 3e-10
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 62 4e-10
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 62 4e-10
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 61 1e-09
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 61 1e-09
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 57 2e-08
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 56 5e-08
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 54 1e-07
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 54 1e-07
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 54 2e-07
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 53 3e-07
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 53 3e-07
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 52 5e-07
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 52 5e-07
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 52 6e-07
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 51 1e-06
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 50 3e-06
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 49 4e-06
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 49 6e-06
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 48 1e-05
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 46 5e-05
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 45 7e-05
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 44 1e-04
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 44 2e-04
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 44 2e-04
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 44 2e-04
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 42 8e-04
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 39 0.005
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 39 0.005
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 38 0.010
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 37 0.018
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 37 0.018
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 37 0.024
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 36 0.042
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 35 0.074
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 35 0.097
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 35 0.097
At3g55160.1 68416.m06126 expressed protein 30 2.1
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 30 2.1
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 30 2.1
At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-contain... 29 4.8
At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-contain... 29 4.8
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 199 bits (486), Expect = 2e-51
Identities = 88/143 (61%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
Frame = +1
Query: 136 EKYNTKCPGVKRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGR 312
E+YN K P VKR+++E E+ A ++++ + PLE+N+FEW F ++GP TEFEGGIYHGR
Sbjct: 4 ERYNRKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGR 63
Query: 313 ILLPKEYPMHPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPT 492
I LP +YP PP +LLTPNGRFE N KICLSIS +HPE WQPSWS+RTAL+ALIAFMPT
Sbjct: 64 IQLPADYPFKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPT 123
Query: 493 PAEGTIGSLDYTPAERKILAKKS 561
G +GS+DY ER+ LA KS
Sbjct: 124 SPNGALGSVDYPKDERRTLAIKS 146
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 134 bits (324), Expect = 9e-32
Identities = 62/139 (44%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Frame = +1
Query: 163 VKRLMREAIELA-EATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
+KRL +E L E ARP +++ EWH+ ++G +GT F GG Y+G+I P EYP
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 340 HPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGSL 519
PP I + TPNGRF KKICLS+S HPE+W P WS+ + L L++FM + T GS+
Sbjct: 67 KPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP-TTGSV 125
Query: 520 DYTPAERKILAKKSTNWSC 576
+ + AE++ LAK S ++C
Sbjct: 126 NTSVAEKQRLAKSSLAFNC 144
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 134 bits (324), Expect = 9e-32
Identities = 62/139 (44%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
Frame = +1
Query: 163 VKRLMREAIELA-EATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
+KRL +E L E ARP +++ EWH+ ++G +GT F GG Y+G+I P EYP
Sbjct: 7 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPY 66
Query: 340 HPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGSL 519
PP I + TPNGRF KKICLS+S HPE+W P WS+ + L L++FM T GS+
Sbjct: 67 KPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFM-MDTSPTTGSV 125
Query: 520 DYTPAERKILAKKSTNWSC 576
+ T E++ LAK S ++C
Sbjct: 126 NTTVIEKQRLAKSSLAFNC 144
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +1
Query: 232 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLT----PNGRFEINKKI 399
+ N+F+W ++GP T +EGG++ +P+ YP+ PP + LT PN F+ +I
Sbjct: 31 DTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG-EI 89
Query: 400 CLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
CL I W P+W++++ A+IA M P
Sbjct: 90 CLDIL---KNAWSPAWTLQSVCRAIIALMAHP 118
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +1
Query: 133 VEKYNTKCPGVKRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHG 309
V K + G KR+ RE EL + + A P DNL+ W T+ GP GT +EGGI+
Sbjct: 29 VAKTSVSASG-KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFL 87
Query: 310 RILLPKEYPMHPPHIILLTPNGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMP 489
I+ P +YP PP ++ T ++ LS++ ++W P+ +I L A+ +
Sbjct: 88 DIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILR-DSWSPALTITKVLQAIRSIFL 146
Query: 490 TP 495
P
Sbjct: 147 KP 148
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 66.1 bits (154), Expect = 3e-11
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
+R+++E L +E A P EDN+ ++ + GP + +EGG++ + LP+EYPM
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 343 PPHIILLTPNGRFEINK--KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
P + LT I+K +ICL I + W P+ IRT LL++ A + P
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAP 117
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 64.5 bits (150), Expect = 1e-10
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
+R+++E L +E A P E+N+ ++ + GP + +EGG++ + LP+EYPM
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 343 PPHIILLTPNGRFEINK--KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
P + LT I+K +ICL I + W P+ IRT LL++ A + P
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLLSIQALLSAP 117
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 34 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 93
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 94 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 143
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNVNSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+ +E +L C A P D++F+W T+ GP + F GG++ I P +YP
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ ++ LL++ + + P
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDIL---KEQWSPALTVSKVLLSICSLLTDP 113
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 62.9 bits (146), Expect = 3e-10
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+ +E +L C A P D++F+W T+ GP + F GG++ I P +YP
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ ++ LL++ + + P
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDIL---KEQWSPALTVSKVLLSICSLLTDP 113
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 PPKVSFKTKVYHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 113
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC--ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 63
Query: 340 HPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T + N ICL I E W P+ +I LL++ + + P
Sbjct: 64 KPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLLTDP 114
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 62.5 bits (145), Expect = 4e-10
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
+R+++E EL C A P +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP ++ T + N ICL I + W P+ +I LL++ + + P
Sbjct: 64 PPKVVFRTKVFHPNINSNGNICLDIL---KDQWSPALTISKVLLSICSLLTDP 113
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 61.3 bits (142), Expect = 1e-09
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Frame = +1
Query: 166 KRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
+R+++E L +E A P EDN+ ++ + GP + +EGG++ + LP+EYPM
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 343 PPHIILLTPNGRFEINK--KICLSISGHHPETWQPSWSIRTALL 468
P + LT I+K +ICL I + W P+ IRT LL
Sbjct: 68 APKVRFLTKIYHPNIDKLGRICLDIL---KDKWSPALQIRTVLL 108
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +1
Query: 235 DNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINKK--ICLS 408
+N++EW ++GP GT +EGG+++ I P +YP PP TP IN + IC++
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
Query: 409 ISGHHPETWQPSWSIRTALLALIAFMPTP 495
I + W P+ + LL+++ + P
Sbjct: 94 IL---KDKWTPALMVEKVLLSILLLLEKP 119
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 57.2 bits (132), Expect = 2e-08
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMH 342
KR+++E +L + C A P+ +++F W T+ GP + + GG++ I P +YP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFK 63
Query: 343 PPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALL 468
PP + T + N ICL I E W P+ +I L
Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVTL 104
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 262 VQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP--NGRFEINKKICLSISGHHPE-T 432
++GP+ T + GI++ +I +P+ YP PP + TP + + + +ICL I P+
Sbjct: 51 IEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGA 110
Query: 433 WQPSWSIRTAL--LALIAFMPTPAEG 504
WQPS +I T L + L+ P P +G
Sbjct: 111 WQPSLNISTVLTSMRLLLSEPNPDDG 136
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 226 PLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINKK--- 396
P DNL T+ GP GT +EGG + I +P YP PP + T I+ +
Sbjct: 27 PKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGA 86
Query: 397 ICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
ICL I + W P+ +++TAL+++ A + P
Sbjct: 87 ICLDIL---KDQWSPALTLKTALVSIQALLSAP 116
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 262 VQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINK--KICLSISGHHPETW 435
+ GP + +EGG++ + LP+EYPM P + LT I+K +ICL I + W
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL---KDKW 64
Query: 436 QPSWSIRTALLALIAFMPTP 495
P+ IRT LL++ A + P
Sbjct: 65 SPALQIRTVLLSIQALLSAP 84
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +1
Query: 166 KRLMREAIELAEATEEYC-ARPL-EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
KR+ RE ++ C A P+ E+++F W T+ GP + + GG++ I +YP
Sbjct: 4 KRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPF 63
Query: 340 HPPHIILLTPNGRFEINKK--ICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP + T I+ K ICL I E W P+ + LL++ + + P
Sbjct: 64 KPPKVNFKTKVYHPNIDSKGSICLDIL---KEQWSPAPTTSKVLLSICSLLTDP 114
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 53.2 bits (122), Expect = 3e-07
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Frame = +1
Query: 226 PLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINK--KI 399
P +N+F W TV GP G +E G++ + +P +YP PP I T I++ +I
Sbjct: 54 PSPENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEI 113
Query: 400 CLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGS---LDYTPAERKILAKKSTNW 570
+ I G W + +I LL++ + + P E + S +RK K + W
Sbjct: 114 FVDILG---SRWSSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAYEKVAREW 170
Query: 571 S 573
+
Sbjct: 171 T 171
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 220 ARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP--NGRFEINK 393
A P EDN+F W T+ G K T FEG Y + +YP PP + T + ++
Sbjct: 57 AFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYG 116
Query: 394 KICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
ICL I + W ++ +RT LL++ + + P
Sbjct: 117 NICLDIL---QDKWSSAYDVRTILLSIQSLLGEP 147
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 52.4 bits (120), Expect = 5e-07
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Frame = +1
Query: 232 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEI--NKKICL 405
E N+F+W ++ GP T +EGG ++ + P+ YP+ PP + + + + K+C+
Sbjct: 32 EKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCI 91
Query: 406 SI---SGHHP-------ETWQPSWSIRTALLALIAFMPTP 495
SI G P E W P ++ + +L++I+ + P
Sbjct: 92 SILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGP 131
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 52.4 bits (120), Expect = 5e-07
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +1
Query: 163 VKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
+KRL E + L + A P EDN+F W T+ G K T FEG Y + +YP
Sbjct: 38 LKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPF 97
Query: 340 HPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
P + T + ++ ICL I + W ++ +RT LL++ + + P
Sbjct: 98 KSPKVKFETCCFHPNVDLYGNICLDIL---QDKWSSAYDVRTILLSIQSLLGEP 148
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 52.0 bits (119), Expect = 6e-07
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Frame = +1
Query: 232 EDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEI--NKKICL 405
E N+FEW T+ GP T +EGG ++ + P+ YP PP + + + + ++C+
Sbjct: 31 EKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCI 90
Query: 406 SI--------SGHH--PETWQPSWSIRTALLALIAFMPTP 495
SI SG+ E W P ++ + +L++I+ + P
Sbjct: 91 SILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGP 130
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = +1
Query: 238 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEI--NKKICLSI 411
N+FEW T+ GP T +EGG ++ + P+ YP PP + + + + ++C+SI
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 412 --------SGHH--PETWQPSWSIRTALLALIAFMPTP 495
SG+ E W P ++ + +L++I+ + P
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGP 162
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Frame = +1
Query: 238 NLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEIN----KKICL 405
NL WH T+ G GT++EGG + + ++YP PP P G F N +CL
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKF--PQGFFHPNVYPSGTVCL 95
Query: 406 SISGHHPETWQPSWSIRTALLALIAFMPTP 495
SI + W+P+ +++ L+ + + TP
Sbjct: 96 SIL-NEDYGWRPAITVKQILVGIQDLLDTP 124
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +1
Query: 169 RLMREAIELAEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPP 348
RL +E +E + DNL W V G GT + Y ++ P+ YPM P
Sbjct: 19 RLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESP 78
Query: 349 HIILLTP---NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAE 501
+I L P + N ICL I ++W P+ ++ + +++++ + + E
Sbjct: 79 QVIFLHPAPLHPHIYSNGHICLDIL---YDSWSPAMTVSSICISILSMLSSSTE 129
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 48.8 bits (111), Expect = 6e-06
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Frame = +1
Query: 235 DNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP---NGRFEINKKICL 405
DNL +W V G GT + Y ++ P+ YPM P ++ ++P + N ICL
Sbjct: 41 DNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICL 100
Query: 406 SISGHHPETWQPSWSIRTALLALIAFM-PTPAEGTIGSLD-YTPAERKILAKKSTNW 570
I ++W P+ ++ + +++++ + +PA+ D Y + + K T W
Sbjct: 101 DIL---YDSWSPAMTVNSVCISILSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRW 154
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 235 DNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTP---NGRFEINKKICL 405
DNL +W V G GT + Y+ ++ P+ YPM P +I + P + N ICL
Sbjct: 41 DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICL 100
Query: 406 SISGHHPETWQPSWSIRTALLALIAFMPTPAE 501
I ++W P+ ++ + +++++ + + E
Sbjct: 101 DIL---YDSWSPAMTVSSVCISILSMLSSSPE 129
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 45.6 bits (103), Expect = 5e-05
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Frame = +1
Query: 112 LNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEYCARPLEDNLFEWHFTVQGPKGTEFE 291
+ +E K TK RL +E +E + DNL W V G GT +
Sbjct: 1 MTSSSESTRKGLTKI-ATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYA 59
Query: 292 GGIYHGRILLPKEYPMHPPHIILLTP---NGRFEINKKICLSISGHHPETWQPSWSIRTA 462
Y ++ P+ YPM P +I P + N ICL + ++W P+ + +
Sbjct: 60 NETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVL---YDSWSPAMRLSSI 116
Query: 463 LLALIAFM 486
L++++ +
Sbjct: 117 CLSILSML 124
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 211 EYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLT----PNGR 378
+Y + D + E++ GPK + ++GG++ R+ LP YP P + +T PN
Sbjct: 19 DYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVD 78
Query: 379 FEINKKICLSISGHHPETWQPSW---SIRTALLALIAFMPTPAE 501
E++ +CL + +TW P + ++ L + P P++
Sbjct: 79 -ELSGSVCLDVIN---QTWSPMFDLVNVFETFLPQLLLYPNPSD 118
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Frame = +1
Query: 211 EYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLT----PNGR 378
+Y + D + E+ GPK + +EGG++ R+ LP YP P + +T PN
Sbjct: 19 DYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVD 78
Query: 379 FEINKKICLSISGHHPETWQPSW---SIRTALLALIAFMPTPAE 501
E++ +CL + +TW P + ++ L + P P++
Sbjct: 79 -EMSGSVCLDVIN---QTWSPMFDLVNVFETFLPQLLLYPNPSD 118
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +1
Query: 157 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 333
P KRLMR+ L + P ++N+ W+ + GP T ++GG + + ++Y
Sbjct: 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 334 PMHPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
P PP + ++ + + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAILTSIQSLLCDP 116
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +1
Query: 157 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 333
P KRLMR+ L + P ++N+ W+ + GP T ++GG + + ++Y
Sbjct: 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 334 PMHPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
P PP + ++ + + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAILTSIQSLLCDP 116
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +1
Query: 157 PGVKRLMREAIELAEATEE-YCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 333
P KRLMR+ L + P ++N+ W+ + GP T ++GG + + ++Y
Sbjct: 4 PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 334 PMHPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
P PP + ++ + + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPTVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAILTSIQSLLCDP 116
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = +1
Query: 157 PGVKRLMREAIELA-EATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEY 333
P KRLM + L + P ++N+ W+ + GP+ T ++GG + + ++Y
Sbjct: 4 PAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDY 63
Query: 334 PMHPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
P PP + ++ + + ICL I + W P + + L ++ + + P
Sbjct: 64 PNKPPIVRFVSRMFHPNIYADGSICLDILQNQ---WSPIYDVAAVLTSIQSLLCDP 116
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +1
Query: 163 VKRLMREAIELAEATEEYCARPLEDNLFEWHFT-VQGPKGTEFEGGIYHGRILLPKEYPM 339
+K+L +E L E+ + + D F ++GP GT +E G++ ++ L ++P
Sbjct: 12 IKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPH 71
Query: 340 HPPHIILLTP--NGRFEINKKICLSISGHHPETWQPSWSIRTALLALIAFMPTP 495
PP +T + N +IC++ + W PS +R L + + P
Sbjct: 72 SPPKGYFMTKIFHPNVASNGEICVNTL---KKDWNPSLGLRHVLSVVRCLLIEP 122
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 39.1 bits (87), Expect = 0.005
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +1
Query: 163 VKRLMREAIELAEATEEYCARPLEDNLFE-WHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
++ L R + + T Y +D L + W T+ GP T +EG I+ ++ K+YP
Sbjct: 17 LEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPE 76
Query: 340 HPPHIILLTPNGRFEINKKICLSISGHHP--ETWQPSWSIRTALLAL 474
PP + + +N + + H P W+ +++ L+ L
Sbjct: 77 SPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQL 123
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 211 EYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLT----PNGR 378
+Y + D+L ++ T GP + ++GG++ ++ LP+ YP P + + PN
Sbjct: 19 DYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVD 78
Query: 379 FEINKKICLSISGHHPETWQPSW---SIRTALLALIAFMPTPAE 501
E + +CL + +TW P + ++ + L + P P++
Sbjct: 79 -ESSGAVCLDVIN---QTWSPMFDLINVFESFLPQLLLYPNPSD 118
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 37.1 bits (82), Expect = 0.018
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Frame = +1
Query: 223 RPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEIN---- 390
R ED + + G GT ++ G++ LP +YP PP + R N
Sbjct: 873 RAYEDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEE 932
Query: 391 KKICLSI----SGHHPETWQP-SWSIRTALLAL 474
K+CLS+ +G E W P S SI L++L
Sbjct: 933 GKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSL 965
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 163 VKRLMREAIELAEATEEYCARPLEDNLFE-WHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
++ L R + + T Y +D + W T+ GP T +EG I+ ++ KEYP
Sbjct: 17 LEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPE 76
Query: 340 HPPHI 354
PP +
Sbjct: 77 SPPTV 81
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 907
Score = 36.7 bits (81), Expect = 0.024
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Frame = +1
Query: 163 VKRLMREAIEL-AEATEEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPM 339
VK++ +E L A R E+ + + G GT + G++ I+LP +YP
Sbjct: 664 VKKVQQEWSNLEANLPNTIYVRVCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYPH 723
Query: 340 HPPHI------ILLTPNGRFEINKKICLSI----SGHHPETWQP-SWSIRTALLALIAFM 486
PP + + L PN +E + ++CLS+ SG E W S SI LL+ A +
Sbjct: 724 EPPMVHYHSGGMRLNPN-LYE-SGRVCLSLLNTWSGSGTEVWNAGSSSILQLLLSFQALV 781
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 35.9 bits (79), Expect = 0.042
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Frame = +1
Query: 268 GPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEINK------KICLSI----SG 417
G +GT + G++ I P YP PP I+ +G IN K+CLS+ SG
Sbjct: 370 GAQGTPYHDGLFFFDIFFPDTYPSTPP--IVHYHSGGLRINPNLYNCGKVCLSLLGTWSG 427
Query: 418 HHPETWQPSWSIRTALLALI 477
+ E W P+ S +L I
Sbjct: 428 NQREKWIPNTSTMLQVLVSI 447
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 35.1 bits (77), Expect = 0.074
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 8/98 (8%)
Frame = +1
Query: 208 EEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEI 387
E R E + + G +GT + G++ I P YP PP++ + R
Sbjct: 289 EAISVRACESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINP 348
Query: 388 N----KKICLSI----SGHHPETWQPSWSIRTALLALI 477
N K+CLS+ +G E W P+ S LL I
Sbjct: 349 NLYNCGKVCLSLLGTWAGSAREKWLPNESTMLQLLVSI 386
Score = 33.9 bits (74), Expect = 0.17
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Frame = +1
Query: 208 EEYCARPLEDNLFEWHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHIILLTPNGRFEI 387
E R E + + G +GT + G++ I P YP PP + + R
Sbjct: 623 ETIFVRACESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINP 682
Query: 388 N----KKICLSI----SGHHPETWQPSWSIRTALLALI 477
N K+CLS+ +G E W P S LL I
Sbjct: 683 NLYKCGKVCLSLISTWTGKKREKWLPKESTMLQLLVSI 720
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 34.7 bits (76), Expect = 0.097
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 250 WHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHI 354
W T+ GP T EG IY ++ K+YP PP +
Sbjct: 49 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTV 83
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 34.7 bits (76), Expect = 0.097
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 250 WHFTVQGPKGTEFEGGIYHGRILLPKEYPMHPPHI 354
W T+ GP T EG IY ++ K+YP PP +
Sbjct: 48 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTV 82
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 100 NSLKLNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEYCARPLEDNLF 246
N L L ++ + +++T K L + IEL EA + + PL N+F
Sbjct: 1992 NLLGLYVFSDCIFRFSTDSNDKKTLFSDIIELGEALKPFLRNPLVSNMF 2040
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 250 WHFTVQGPKG-TEFEGGIYHGRILLPKEYPMHPPHI 354
W T+ GP T EG IY ++ K+YP PP +
Sbjct: 49 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTV 84
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 250 WHFTVQGPKG-TEFEGGIYHGRILLPKEYPMHPPHI 354
W T+ GP T EG IY ++ K+YP PP +
Sbjct: 48 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTV 83
>At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 870
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 112 LNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEY 216
L K + +EKY TK G+ R + E+ +EY
Sbjct: 179 LEKALQFIEKYGTKIEGILRQSADVEEVERRVQEY 213
>At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 822
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 112 LNKMAEIVEKYNTKCPGVKRLMREAIELAEATEEY 216
L K + +EKY TK G+ R + E+ +EY
Sbjct: 179 LEKALQFIEKYGTKIEGILRQSADVEEVERRVQEY 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,831
Number of Sequences: 28952
Number of extensions: 337761
Number of successful extensions: 811
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2441087448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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