Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D06
         (945 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   8.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   8.0  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 568 VEYSMMHR*SVFVANFYNLCRGTVISNFD 654
           +E  +M   ++ V  F  L RGT+I +FD
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFD 121


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 568 VEYSMMHR*SVFVANFYNLCRGTVISNFD 654
           +E  +M   ++ V  F  L RGT+I +FD
Sbjct: 93  IECFVMMALTLIVTLFTFLARGTLIKSFD 121


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 691 ICESKRKENYYCSQNLI 641
           +CE +RK +  C  NL+
Sbjct: 936 MCEGERKHHMPCPSNLV 952


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 342 GFIAESGPDERVHLCHVSTQPKQPTCRCC 256
           G I E    +RVH   V++   +P  R C
Sbjct: 223 GRIVERFTSDRVHAALVTSPRARPLARTC 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,770
Number of Sequences: 336
Number of extensions: 4315
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26582281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)