Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D02
(948 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 42 2e-04
SPBC21C3.07c |||actin binding methyltransferase |Schizosaccharom... 37 0.004
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 36 0.006
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 36 0.006
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 35 0.019
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.025
SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.059
SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.059
SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr 1... 33 0.059
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.078
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 33 0.078
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.10
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 32 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.41
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.96
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 27 2.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.9
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual 27 3.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 5.1
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 26 8.9
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 26 8.9
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 228 RTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEGF-KVVSVDASD 374
RT+ Y+DF+ KTVLD CGTGI SM G KV +VD SD
Sbjct: 239 RTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSD 288
>SPBC21C3.07c |||actin binding methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 281
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Frame = +3
Query: 165 DQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLV--- 335
++Y D K KF + Q + + L L ++ G K++L+ CG G ++
Sbjct: 80 ERYWDQFYGKNEGKFFMNRRWIAQEFPELLDLLKEDAGEKSILEIGCGAGNTIWPILKEN 139
Query: 336 -NEGFKVVSVDASDKMLKHALKARWDKRXNPKYDDWVIEEANWETLPQDIETFLPDTQFD 512
N K+ +VD S+K + + NP YD + W+ D+ + + D
Sbjct: 140 KNSNLKIFAVDYSEKAIDVV-------KQNPLYDAKFCSASVWDLAGSDLLRSIEEASID 192
Query: 513 AV 518
A+
Sbjct: 193 AI 194
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 261 LLKNNGCKTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKAR 404
LL G +LD CG+GI + + ++G VV +D S ML AL+++
Sbjct: 42 LLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 36.3 bits (80), Expect = 0.006
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +3
Query: 189 AKTWNKFIGDS---NQRTQNYKDFLIGLLKNNGC---KTVLDAACGTGIDSMMLVNEGFK 350
AKTW + G S + DF+ + + C K +LD CG GI S + G
Sbjct: 42 AKTWWDWDGGSRLLHLMNSTRLDFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGAS 101
Query: 351 VVSVDASDKMLKHALK 398
V +VDAS ++ A K
Sbjct: 102 VTAVDASPMAIEVAKK 117
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 34.7 bits (76), Expect = 0.019
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 162 KDQYADGKAAKTWNKFIGDSNQRTQNYKDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNE 341
KD Y D + ++ + + RT +Y+D ++ K VLD CGTGI SM
Sbjct: 16 KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARA 75
Query: 342 GFK-VVSVDASD 374
G K V VD S+
Sbjct: 76 GAKHVYGVDMSE 87
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPP 882
P+ PP P P G P P PPP PP P PP
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSP 864
P PP P P G P P P P G PP P +P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 29.9 bits (64), Expect = 0.55
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
P+ PP P P G P P P P G PP P + PP P
Sbjct: 1105 PKPSVAVPPVPAPS-GAPPVPKPSVAAPPVPVPSGAPPVPKPSVA----APPVP 1153
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 748 PPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNP 852
PP P P G P P P P G PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/46 (28%), Positives = 15/46 (32%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSP 864
P+ PP P P P P P P PP P +P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
P+ PP P P G P P P P G PP P + PP P
Sbjct: 1124 PKPSVAAPPVP-VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA----APPVP 1172
Score = 29.1 bits (62), Expect = 0.96
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 748 PPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
PP P P P P P P G PP P + PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA----APPVP 1134
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +1
Query: 748 PPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSP 864
PP P P P P P P PP P +P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXX-LXTPXXXPPPXGXPPXDNPGXSPFXXXPPXPFXXXP 903
P+ PP P P G P P + P P G PP P PP P
Sbjct: 1143 PKPSVAAPPVPAPS-GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Query: 904 XXXXXRLFHTPPPA 945
+ PPP+
Sbjct: 1202 KPSVG-VPPVPPPS 1214
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
P+ PP P PP P P PPP PP P PP P
Sbjct: 1182 PKPAAGVPPVP-PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG----LPPVP 1230
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +1
Query: 712 SXXAPP-RXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
S APP PP P P P P P P PP +P PP P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV----PAPSSGIPPVP 1182
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 727 PRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
P+ PP P P P P P P P PP PP P
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAP-PVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 26.2 bits (55), Expect = 6.7
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 6/79 (7%)
Frame = +2
Query: 725 PPGXXSXPPPXXVLPXVXXXX--PPXXKP----PXXXXPPXGXPPXTTXAXPPXPXXPXX 886
P G P P P V PP KP P P G PP A P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 887 XFXLPHXXXXXGFSTPPPP 943
P G PPP
Sbjct: 1196 EAP-PVPKPSVGVPPVPPP 1213
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 712 SXXAPPRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
S APP P P P P PPP P + P PP P
Sbjct: 1028 SADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 748 PPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
PP P P G P P P PP P + P S P P
Sbjct: 1217 PPVPTPSAGLPPVP----VPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
>SPAC750.03c |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 282 KTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRXNPKYD 434
+ VLDA C ++ L + G+KVV +D S++ + A+ ++ N ++
Sbjct: 11 ENVLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFN 61
>SPBC1348.04 |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 145
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 282 KTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRXNPKYD 434
+ VLDA C ++ L + G+KVV +D S++ + A+ ++ N ++
Sbjct: 11 ENVLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFN 61
>SPAC977.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 145
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 282 KTVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRXNPKYD 434
+ VLDA C ++ L + G+KVV +D S++ + A+ ++ N ++
Sbjct: 11 ENVLDAGCEPNRNARYLASLGYKVVGIDISERAISKAIDKTSSEKSNVNFN 61
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.078
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +2
Query: 722 PPPGXXSXPPPXXVLPXVXXXXPPXXKPPXXXXPPXGXPPXTTXAXPPXPXXP 880
PPP S PP P + PP +P P P + P P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 32.7 bits (71), Expect = 0.078
Identities = 26/90 (28%), Positives = 42/90 (46%)
Frame = +3
Query: 285 TVLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHALKARWDKRXNPKYDDWVIEEANWE 464
++LD ACGTG+ S L ++V +D S M+ ++ K PK + +
Sbjct: 80 SILDFACGTGLISQHLFPYCKQIVGIDVSQDMV-DVYNEKFRKMNIPKERACAYVLSLDD 138
Query: 465 TLPQDIETFLPDTQFDAVICLGNSFAHLLD 554
E F T+FDAV+C ++ H+ D
Sbjct: 139 LDGNGDEPF--STEFDAVVC-SMAYHHIKD 165
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 32.3 bits (70), Expect = 0.10
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)
Frame = +2
Query: 728 PGXXSXPPPXXVLPXVXXXXPPXXKPP--XXXXPPXGXPPXTTXAXPPXPXXPXXXFXLP 901
PG PPP P PP P PP P PP P P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 902 HXXXXXGFSTPPPP 943
G PPPP
Sbjct: 263 PMHHEPGEHMPPPP 276
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)
Frame = +2
Query: 728 PGXXSXPPPXXVLPXVXXXXPPXXKPPXXXXPPXGX--PPXTTXAXPPXPXXPXXXFXLP 901
PG PPP P PP P PP P PP P P
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Query: 902 HXXXXXGFSTPPPP 943
G PPPP
Sbjct: 276 PMHHEPGEHMPPPP 289
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)
Frame = +2
Query: 728 PGXXSXPPPXXVLPXVXXXXPPXXKPP--XXXXPPXGXPPXTTXAXPPXPXXPXXXFXLP 901
PG PPP P PP P PP P PP P P
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Query: 902 HXXXXXGFSTPPPP 943
G PPPP
Sbjct: 315 PMHHEPGEHMPPPP 328
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 2/74 (2%)
Frame = +2
Query: 728 PGXXSXPPPXXVLPXVXXXXPPXXKPPXXXXPPXGX--PPXTTXAXPPXPXXPXXXFXLP 901
PG PPP P PP P PP P PP P P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Query: 902 HXXXXXGFSTPPPP 943
G PPPP
Sbjct: 328 PMHHEPGEHMPPPP 341
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 288 VLDAACGTGIDSMMLVNEGFKVVSVDASDKMLKHA 392
+LD CG G+ + LV++ +VV +DAS M+K A
Sbjct: 37 LLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAA 71
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.41
Identities = 30/128 (23%), Positives = 35/128 (27%), Gaps = 2/128 (1%)
Frame = +2
Query: 566 PQXAEAVSXPPPRNA*SXPXSXXLAPXXXDXXIXXXXXXXXXXXXXXXXLXXPPPGXXS- 742
PQ A PPPR+A P + P PP G S
Sbjct: 355 PQGRSAPPPPPPRSA---PSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR 411
Query: 743 -XPPPXXVLPXVXXXXPPXXKPPXXXXPPXGXPPXTTXAXPPXPXXPXXXFXLPHXXXXX 919
PP P + PP P P G P P P P +P
Sbjct: 412 TSTPPVPTPPSLPPSAPPSLPPSAPPSLPMG-APAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 920 GFSTPPPP 943
+ PPP
Sbjct: 471 PAAPAPPP 478
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.1 bits (62), Expect = 0.96
Identities = 18/66 (27%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 751 PXPGPPXGXXPXPXXLXTPXXXPPPX--GXPPXDNPGXSPFXXXPPXPFXXXPXXXXXRL 924
P P PP P P P P P G PP P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 925 FHTPPP 942
++ P P
Sbjct: 792 YYAPAP 797
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +1
Query: 712 SXXAPPRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
S PP P P P P P P PPP PP G P PP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP---PPP---PPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 724 PPRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPP 882
PP PP P PP G PPP PP + G S + P
Sbjct: 753 PPAPIMGGPPPPPPPPGV--------AGAGPPPPPPPPPAVSAGGSRYYAPAP 797
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +3
Query: 351 VVSVDASDKMLKHALKARWDKRXNPKYDDWVIEEANWETLPQDIETFLPDTQFDAVICLG 530
+V D ++ +K L + +R + YD+ +IE+ + ++ + D Q + ++ G
Sbjct: 384 LVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATNDIKDLQTEEIVEEG 443
Query: 531 NS 536
NS
Sbjct: 444 NS 445
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +1
Query: 724 PPRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSPFXXXPPXP 888
P R PP P P P + P PP PP P P P P
Sbjct: 1691 PVRPQSAAPPQMSAPT-PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +2
Query: 725 PPGXXSXPPPXXVLPXVXXXXPPXXKPPXXXXPPXGXPPXTTXAXPPXPXXP 880
PP + PP P PP PP PP PP + P P
Sbjct: 1699 PPQMSAPTPP----PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Frame = +1
Query: 721 APPRXXXXXPPXPG---PPXGXXPXPXXLXTPXXXPPP---XGXPPXDNPG 855
APP+ PP P PP P P P PPP P NPG
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAP-PMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 369 SDKMLKHALKARWDKRXNPKYDDWVIEEANWETL 470
SD L+ ++A+WD K+ +IE N +TL
Sbjct: 102 SDPQLQDGMQAKWDPTDVAKHISQIIERYNIKTL 135
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 851 GLSXGGXPXGGGXXXGVXXXXGXGXXPXGGPGKGGXXXXXRGG 723
G GG P G G G G G G G GG GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 357 SVDASDKML-KHALKARWDKRXN-PKYDDWVIEEANWETLPQDIETFLPDTQFD 512
S D D+ L +H+ + D + +D ++E +W+ QD+E L D D
Sbjct: 582 SYDLPDRNLSEHSYSSSSDDEQRISELNDRELDEIDWQAADQDVENALKDLSDD 635
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 243 KDFLIGLLKNNGCKTVLDAACGTGIDSMMLVNEG-FKVVSVDASDK-MLKHALKARWDK 413
K+F+I LK+NG T++ CG G + + + + V ++AS++ ML+ +AR K
Sbjct: 805 KEFMISTLKHNGYITLM---CGDGTNDVGALKQAHVGVALLNASEEDMLEMQERARNQK 860
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,228,973
Number of Sequences: 5004
Number of extensions: 66510
Number of successful extensions: 325
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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