Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D02
         (948 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    34   0.007
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.63 
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             26   1.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 33.9 bits (74), Expect = 0.007
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = +1

Query: 724 PPRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDNPGXSP 864
           PPR      P P  P G  P P  +  P     P G  P   PG  P
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQP 246


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.63
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = -2

Query: 863 GEXPGLSXGGXPXGGGXXXGVXXXXGXGXXPXGGPGKGG 747
           G   G S GG P GGG   G       G  P GG G GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSG-------GPGPGGGGGGGG 232


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +1

Query: 70  KRNGR-VSTHFKLWQRTRYSTRVPWVFPPRV*KISTL 177
           K NGR + TH+   Q  R +     +FPPR+ K STL
Sbjct: 155 KYNGRSLQTHWLSEQCNRLNGTDGSIFPPRITKNSTL 191


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
 Frame = +2

Query: 722 PPPGXXSXPPPXXVLPXVXXXXP-PXXKPPXXXXPPXGXPPXTTXAXPPXPXXP 880
           PP    S PPP   +P      P     PP    P    PP      PP    P
Sbjct: 71  PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVP 124



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 13/40 (32%), Positives = 14/40 (35%)
 Frame = +1

Query: 721 APPRXXXXXPPXPGPPXGXXPXPXXLXTPXXXPPPXGXPP 840
           APP       P P P  G  P P  + T    P   G  P
Sbjct: 98  APPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPMGLGMRP 137


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = +1

Query: 748 PPXPGPPXGXXPXPXXLXTPXXXPPPXGXPPXDN 849
           PP P PP    P P  L       P    PP  N
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPN 615


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 17/56 (30%), Positives = 19/56 (33%)
 Frame = -1

Query: 870 GKGGXAXVVXGGXPXGGXXXXGGXXXGGXXXXTXGRTXXGGGXXXXPGGGXXRKXG 703
           G GG +  V G    G     GG   G       GR   G G     GGG   + G
Sbjct: 518 GGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGA-GRGGVGSGIGGGGGGGGGGRAG 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,394
Number of Sequences: 2352
Number of extensions: 18086
Number of successful extensions: 46
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)