Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D01
(885 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 45 9e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 42 5e-04
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 42 7e-04
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 42 7e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 40 0.004
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 38 0.011
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 36 0.033
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 35 0.076
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 35 0.10
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 34 0.13
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 34 0.18
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 33 0.41
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 31 0.94
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 31 0.94
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 31 1.2
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18) 29 3.8
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 29 6.6
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 6.6
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDFALK + W NT IRLQ+W IAG ERF +MTRVYYK
Sbjct: 53 VDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVYYK 90
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 516 NTIEQPSXVDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
NT VDF ++ L D TI +LQ+WD AG ERF +T YY+
Sbjct: 35 NTYISTIGVDFKIRTLTVDGKTI-KLQIWDTAGQERFRTLTTAYYR 79
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF ++VL + I+LQ+WD AG ERF ++T YY+
Sbjct: 48 VDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYYR 85
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 41.9 bits (94), Expect = 7e-04
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 451 IGELGTGKTSIIKRYVHQFF 510
IG+LG GKTS+IKRYVHQFF
Sbjct: 677 IGDLGVGKTSLIKRYVHQFF 696
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 41.9 bits (94), Expect = 7e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF ++ + D TI +LQ+WD AG ERF +T YY+
Sbjct: 64 VDFKIRTIELDGKTI-KLQIWDTAGQERFRTITSSYYR 100
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 41.9 bits (94), Expect = 7e-04
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF ++ +N D + +LQ+WD AG ERF +T YY+
Sbjct: 12 VDFKIRTINIDGEKV-KLQIWDTAGQERFRTITSTYYR 48
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F K++N ++ +LQ+WD AG ERF ++TR YY+
Sbjct: 130 VEFGSKIVNVGGKSV-KLQIWDTAGQERFRSVTRSYYR 166
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYY 650
VDF +K ++ D + +LQ+WD AG ERF ++T+ YY
Sbjct: 42 VDFTIKTVDVDGEKV-KLQIWDTAGQERFRSITQSYY 77
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF +K +N + I +QLWD AG ERF ++T+ Y++
Sbjct: 931 VDFQIKTMNVNGQCIA-IQLWDTAGQERFRSITKQYFR 967
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF +K L D T LQLWD AG ERF ++ + Y++
Sbjct: 477 VDFQMKTLVVDGKTYA-LQLWDTAGQERFRSIAKSYFR 513
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 37.1 bits (82), Expect = 0.019
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF +K L + N +L +WD AG ERF +T YY+
Sbjct: 43 VDFKVKTLTVEGNKA-KLAIWDTAGQERFRTLTPSYYR 79
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 36.3 bits (80), Expect = 0.033
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF +K + + ++ ++LQ+WD AG ER+ +T YY+
Sbjct: 56 IDFKVKTV-FRNDKRVKLQIWDTAGQERYRTITTAYYR 92
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 35.1 bits (77), Expect = 0.076
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
I+LQ+WD AG ERF +T YY+
Sbjct: 5 IKLQIWDTAGQERFHTITTAYYR 27
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 34.7 bits (76), Expect = 0.10
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
++LQ+WD AG ERF +T+ YY+
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYR 117
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + + + II+ Q+WD AG ER+ +T YY+
Sbjct: 47 VEFATRSIQVEGK-IIKAQVWDTAGQERYRAITSAYYR 83
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +3
Query: 540 VDFALKVLNW-----DSNTIIRLQLWDIAGXERFGNMTRVY 647
VDF + + W ++ ++LQ WD+A ERF MT VY
Sbjct: 88 VDFYVHFIEWRETDKKKDSTVKLQFWDVAEHERFLKMTAVY 128
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.9 bits (74), Expect = 0.18
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
IRL LWD AG E F +T+ YY+
Sbjct: 34 IRLMLWDTAGQEEFDAITKAYYR 56
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VD +VL+ + + +LQ WD AG E+F +T+ YY+
Sbjct: 46 VDVGTRVLDIHGDRV-KLQCWDTAGQEKFRGITQSYYR 82
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 32.7 bits (71), Expect = 0.41
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
I LQLWD AG ERF ++T +++
Sbjct: 166 IHLQLWDTAGQERFRSLTTAFFR 188
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 31.5 bits (68), Expect = 0.94
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF + + D + +LQLWD AG E++ ++R +++
Sbjct: 45 VDFFIHDFDLDGKKV-KLQLWDTAGEEKYRALSRSFFR 81
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 31.5 bits (68), Expect = 0.94
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 528 QPSX-VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
QP+ +DF K + D + RLQ+WD AG ERF + Y +
Sbjct: 193 QPTIGIDFMTKTVLLDDFEV-RLQIWDTAGQERFRCLIHSYIR 234
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 31.5 bits (68), Expect = 0.94
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +3
Query: 576 NTIIRLQLWDIAGXERFGNMTRVYYK 653
+T ++ ++WD AG ER+ ++ +YY+
Sbjct: 67 DTTVKFEIWDTAGQERYHSLAPMYYR 92
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
+ L +WD AG ERF +T+ YY+
Sbjct: 60 VTLSVWDTAGVERFRTVTKNYYR 82
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERF-GNMTRVYYK 653
VDF K L + ++LQLWD AG ERF +M YY+
Sbjct: 81 VDFWEKSLELNGE-FVKLQLWDTAGQERFRKSMVCHYYR 118
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +1
Query: 397 HTHRLVLNAGSIYIRSSXIGELGTGKTSIIKRYVHQFF 510
+ H V+ + ++ +G+ +GKTS+++RY+H F
Sbjct: 15 YVHSAVIMGSKVDVKVVLLGKEYSGKTSLVERYLHHRF 52
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F K + D + LQ+WD AG ERF ++ +Y+
Sbjct: 246 VEFLNKDVKLDGESYT-LQIWDTAGQERFKSLRTPFYR 282
>SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)
Length = 2111
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 631 FPKRSCPAISHSCNLIMVFESQFS-TFSAKSTXD 533
FPK S PAIS SC + VF + ++K++ D
Sbjct: 980 FPKLSIPAISASCKVARVFPKSYKINIASKNSID 1013
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYY 650
I+ +WD AG E+FG + YY
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYY 102
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 28.7 bits (61), Expect = 6.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 588 RLQLWDIAGXERFGNMTRVYYK 653
+ +WD AG ERF ++ +YY+
Sbjct: 10 KFNIWDTAGQERFKSLAPLYYR 31
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,363,556
Number of Sequences: 59808
Number of extensions: 396638
Number of successful extensions: 755
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2526446612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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