Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_D01
         (885 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            31   0.035
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   3.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.1  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           25   4.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     25   4.1  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    24   7.1  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 31.5 bits (68), Expect = 0.035
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 576 NTIIRLQLWDIAGXERFGNMTRVYYK 653
           +T ++ ++WD AG ER+ ++  +YY+
Sbjct: 70  DTTVKFEIWDTAGQERYHSLAPMYYR 95


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 666 AHCFPCNKHASCSRSAXVLLYPIVAI 589
           AHC    + ASCS +A  L Y + A+
Sbjct: 42  AHCTQQTRQASCSDNAAQLTYRLPAL 67


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 323  IRSDNFDEVLNRIFSIKFKHIALQTRRSV 237
            +RS N +E+++R+F  K K   L T+ ++
Sbjct: 1063 VRSTNGEEIVSRLFVSKSKVTPLATKHTI 1091


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 445 RILYKCSRRSALADACELPACCFCFGD 365
           R L KC  +S     CEL  C FCF +
Sbjct: 140 RPLRKCRNKST----CELDHCVFCFNN 162


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 445 RILYKCSRRSALADACELPACCFCFGD 365
           R L KC  +S     CEL  C FCF +
Sbjct: 141 RPLRKCRNKST----CELDHCVFCFNN 163


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 162 VHATW*KIILGNYFFNFSGSKRCYVIRLSVRSD*RLIYEVK 40
           +HA W  I  G+ +F    SKR   I +   S  RL+ EV+
Sbjct: 213 IHALWFDIYTGDIYFFSRNSKR--FIAIDESSIDRLLDEVR 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,464
Number of Sequences: 2352
Number of extensions: 13167
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)