Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_D01
(885 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 42 5e-04
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 42 7e-04
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 42 7e-04
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 42 7e-04
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 40 0.002
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 40 0.002
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 40 0.002
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 40 0.002
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 40 0.003
At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putati... 40 0.003
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 40 0.003
At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putati... 39 0.004
At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2) id... 39 0.005
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 38 0.009
At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putati... 37 0.015
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 37 0.015
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 37 0.015
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 37 0.015
At4g39890.1 68417.m05651 Ras-related GTP-binding family protein ... 37 0.020
At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putati... 36 0.027
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 36 0.027
At3g15060.1 68416.m01905 Ras-related GTP-binding family protein ... 36 0.027
At3g12160.1 68416.m01516 Ras-related GTP-binding family protein ... 36 0.027
At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putati... 36 0.027
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 36 0.027
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 36 0.027
At5g47960.1 68418.m05925 Ras-related GTP-binding family protein ... 36 0.036
At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putati... 36 0.047
At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putati... 36 0.047
At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putati... 36 0.047
At1g18200.1 68414.m02264 Ras-related GTP-binding family protein ... 35 0.062
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 35 0.083
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 35 0.083
At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putati... 35 0.083
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 35 0.083
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 35 0.083
At1g73640.1 68414.m08525 Ras-related GTP-binding family protein ... 34 0.14
At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 / ... 34 0.14
At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putati... 33 0.19
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 33 0.25
At5g65270.1 68418.m08210 Ras-related GTP-binding family protein ... 33 0.33
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 32 0.44
At4g09720.2 68417.m01597 Ras-related GTP-binding protein, putati... 32 0.58
At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putati... 32 0.58
At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small GT... 32 0.58
At3g16100.1 68416.m02034 Ras-related GTP-binding family protein ... 32 0.58
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 32 0.58
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 32 0.58
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 32 0.58
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 32 0.58
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 32 0.58
At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putati... 31 0.77
At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putati... 31 1.0
At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putati... 31 1.0
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 31 1.3
At2g17900.1 68415.m02073 zinc finger (MYND type) family protein ... 31 1.3
At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small GTP-... 30 2.3
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 30 2.3
At1g04390.1 68414.m00429 expressed protein 29 3.1
At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3) ... 29 5.4
At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putati... 29 5.4
At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein... 29 5.4
At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein... 29 5.4
At2g35340.1 68415.m04333 RNA helicase, putative similar to ATP-d... 28 7.2
At5g09910.1 68418.m01146 GTP-binding protein-related contains we... 28 9.5
At4g38830.1 68417.m05497 protein kinase family protein contains ... 28 9.5
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF ++ + D TI +LQ+WD AG ERF +T YY+
Sbjct: 43 VDFKIRTIEQDGKTI-KLQIWDTAGQERFRTITSSYYR 79
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF ++ + D TI +LQ+WD AG ERF +T YY+
Sbjct: 43 VDFKIRTVEQDGKTI-KLQIWDTAGQERFRTITSSYYR 79
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF ++ + D TI +LQ+WD AG ERF +T YY+
Sbjct: 43 VDFKIRTVEQDGKTI-KLQIWDTAGQERFRTITSSYYR 79
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF ++ + D TI +LQ+WD AG ERF +T YY+
Sbjct: 43 VDFKIRTVEQDGKTI-KLQIWDTAGQERFRTITSSYYR 79
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF ++ + D I +LQ+WD AG ERF +T YY+
Sbjct: 50 IDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYR 86
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF ++ + D I +LQ+WD AG ERF +T YY+
Sbjct: 50 IDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYR 86
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF ++ + D I +LQ+WD AG ERF +T YY+
Sbjct: 50 IDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYR 86
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF ++ + D I +LQ+WD AG ERF +T YY+
Sbjct: 50 IDFKIRTIELDGKRI-KLQIWDTAGQERFRTITTAYYR 86
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF ++ + D I +LQ+WD AG ERF +T YY+
Sbjct: 50 IDFKIRTVELDGKRI-KLQIWDTAGQERFRTITTAYYR 86
>At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1208537 from [Glycine
max]
Length = 205
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F K + D N I+LQ+WD AG E F ++TR YY+
Sbjct: 41 VEFGAKTITID-NKPIKLQIWDTAGQESFRSVTRSYYR 77
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF ++ + D I +LQ+WD AG ERF +T YY+
Sbjct: 50 IDFKIRTVELDGKRI-KLQIWDTAGQERFRTITTAYYR 86
>At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303744 from [Pisum
sativum]
Length = 216
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + LN D +I+ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATRSLNVDDK-VIKAQIWDTAGQERYRAITSAYYR 84
>At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2)
identical to Rab2-like protein (At-RAB2) GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F +++ D N I+LQ+WD AG E F ++TR YY+
Sbjct: 41 VEFGARMITID-NKPIKLQIWDTAGQESFRSITRSYYR 77
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 516 NTIEQPSXVDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
NT + +DF K + + T+ RLQLWD AG ERF ++ Y +
Sbjct: 36 NTYQATIGIDFLSKTMYLEDRTV-RLQLWDTAGQERFRSLIPSYIR 80
>At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putative
similar to Rab2-like GTP-binding protein GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F +++ D I +LQ+WD AG E F ++TR YY+
Sbjct: 41 VEFGARMVTVDGRPI-KLQIWDTAGQESFRSITRSYYR 77
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + LN + +I+ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATRSLNVNEK-VIKAQIWDTAGQERYRAITSAYYR 84
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + ++ D II+ QLWD AG ER+ +T YY+
Sbjct: 48 VEFATRSVHVDEK-IIKAQLWDTAGQERYRAITSAYYR 84
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + L D +++ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATRTLKVDGK-VVKAQIWDTAGQERYRAITSAYYR 84
>At4g39890.1 68417.m05651 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 214
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 516 NTIEQPSX-VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+T QP+ +DF K + + T+ RLQLWD AG ERF ++ Y +
Sbjct: 35 DTTYQPTIGIDFLSKTMYLEDRTV-RLQLWDTAGQERFRSLIPSYIR 80
>At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + ++ D I++ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATRSIHVDDK-IVKAQIWDTAGQERYRAITSAYYR 84
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + L + T+ + Q+WD AG ER+ +T YY+
Sbjct: 47 VEFATRTLQVEGKTV-KAQIWDTAGQERYRAITSAYYR 83
>At3g15060.1 68416.m01905 Ras-related GTP-binding family protein
similar to GTP-binding protein GI:303742 from [Pisum
sativum]; contains Pfam profile: PF00071 ras family
Length = 217
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + ++ D I++ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATRSIHVDEK-IVKAQIWDTAGQERYRAITSAYYR 84
>At3g12160.1 68416.m01516 Ras-related GTP-binding family protein
similar to ras-related GTP-binding protein RGP1
SP:P25766 from [Oryza sativa];contains Pfam profile:
PF00071 Ras family
Length = 222
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F K L D+ T+ + Q+WD AG ER+ +T YY+
Sbjct: 50 VEFQTKTLVIDNKTV-KAQIWDTAGQERYRAVTSAYYR 86
>At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from (Pisum
sativum)
Length = 218
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + + D I++ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATRSIQCDDK-IVKAQIWDTAGQERYRAITSAYYR 84
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + L + T+ + Q+WD AG ER+ +T YY+
Sbjct: 47 VEFATRTLQVEGRTV-KAQIWDTAGQERYRAITSAYYR 83
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + L + T+ + Q+WD AG ER+ +T YY+
Sbjct: 47 VEFATRTLQVEGKTV-KAQIWDTAGQERYRAITSAYYR 83
>At5g47960.1 68418.m05925 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 223
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F + L D TI + Q+WD AG ER+ +T YY+
Sbjct: 50 VEFQTRTLEIDRKTI-KAQIWDTAGQERYRAVTSAYYR 86
>At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 206
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
+DF K ++ T RLQLWD AG ERF ++ Y +
Sbjct: 42 IDFLSKTTRYEDRTF-RLQLWDTAGQERFKSLVPSYIR 78
>At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab-6A SP:P20340 from
[Homo sapiens]
Length = 178
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 519 TIEQPSXVDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
T + +DF K + + T+ RLQLWD AG ERF ++ Y +
Sbjct: 8 TYQATIGIDFLSKTMYLEDRTV-RLQLWDTAGQERFRSLIPSYIR 51
>At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 207
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 519 TIEQPSXVDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
T + +DF K + + T+ RLQLWD AG ERF ++ Y +
Sbjct: 37 TYQATIGIDFLSKTMYLEDRTV-RLQLWDTAGQERFRSLIPSYIR 80
>At1g18200.1 68414.m02264 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 354
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDFA + + TI + Q+WD AG ERF +T YY+
Sbjct: 48 VDFAYRNVRVGDKTI-KAQIWDTAGQERFRAITSSYYR 84
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 34.7 bits (76), Expect = 0.083
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF +K L + +L +WD AG ERF +T YY+
Sbjct: 47 VDFKIKQLTVGGKRL-KLTIWDTAGQERFRTLTSSYYR 83
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 34.7 bits (76), Expect = 0.083
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + + TI + Q+WD AG ER+ +T YY+
Sbjct: 47 VEFATRTTQVEGKTI-KAQIWDTAGQERYRAITSAYYR 83
>At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putative
similar to Ras family GTP-binding protein SP:Q43463 from
[Glycine max]
Length = 212
Score = 34.7 bits (76), Expect = 0.083
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K L+ D ++ LQ+WD AG ERF ++ +Y+
Sbjct: 45 DFVTKELHIDEKSVT-LQIWDTAGQERFQSLGAAFYR 80
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 34.7 bits (76), Expect = 0.083
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF +K L + +L +WD AG ERF +T YY+
Sbjct: 47 VDFKVKYLTIGEKKL-KLAIWDTAGQERFRTLTSSYYR 83
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 34.7 bits (76), Expect = 0.083
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA K + +++ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATKTTKVEGK-VVKAQIWDTAGQERYRAITSAYYR 84
>At1g73640.1 68414.m08525 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 ras family Pfam profile:
PF00071 Ras family
Length = 233
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + ++ + II+ Q+WD AG ERF +T YY+
Sbjct: 48 VEFAYRNVHV-GDKIIKAQIWDTAGQERFRAITSSYYR 84
>At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 /
small GTP-binding protein, putative identical to
SP:O04157 Ras-related protein Rab7 (AtRab75)
[Arabidopsis thaliana]
Length = 203
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K L D ++ LQ+WD AG ERF ++ +Y+
Sbjct: 44 DFVTKELQIDDR-LVTLQIWDTAGQERFQSLGVAFYR 79
>At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303738 from [Pisum
sativum]
Length = 224
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F + L+ + +I + Q+WD AG ER+ +T YY+
Sbjct: 52 VEFQTRTLSIEQKSI-KAQIWDTAGQERYRAVTSAYYR 88
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+FA + + I++ Q+WD AG ER+ +T YY+
Sbjct: 48 VEFATRRGIQVDDKIVKAQIWDTAGQERYRAITSAYYR 85
>At5g65270.1 68418.m08210 Ras-related GTP-binding family protein
similar to GTP-binding protein RAB11A GI:1370142 from
[Lotus japonicus]; contains Pfam profile: PF00071 Ras
family
Length = 226
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
V+F + L D ++ + Q+WD AG ER+ +T YY+
Sbjct: 52 VEFQTRTLVIDHKSV-KAQIWDTAGQERYRAVTSAYYR 88
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
I+ Q+WD AG ERF +T YY+
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYR 85
>At4g09720.2 68417.m01597 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 172
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K L ++ LQ+WD AG ERF ++ +Y+
Sbjct: 10 DFVTKELQIGEK-LVTLQIWDTAGQERFQSLGAAFYR 45
>At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 206
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K L ++ LQ+WD AG ERF ++ +Y+
Sbjct: 44 DFVTKELQIGEK-LVTLQIWDTAGQERFQSLGAAFYR 79
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 451 IGELGTGKTSIIKRYVHQFF 510
+G+ G GKTS++ +YVH+ F
Sbjct: 14 LGDSGVGKTSLMNQYVHKKF 33
>At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small
GTPase Ara6 [Arabidopsis thaliana] GI:13160603
Length = 202
Score = 31.9 bits (69), Expect = 0.58
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 546 FALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
F + + +T ++ ++WD AG ER+ + +YY+
Sbjct: 70 FLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYR 105
>At3g16100.1 68416.m02034 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K + D I LQ+WD AG ERF ++ +Y+
Sbjct: 44 DFLTKEVQIDDR-IFTLQIWDTAGQERFQSLGVAFYR 79
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
++ Q+WD AG ERF +T YY+
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYR 83
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
++ Q+WD AG ERF +T YY+
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYR 83
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
++ Q+WD AG ERF +T YY+
Sbjct: 61 VKAQIWDTAGQERFRAVTSAYYR 83
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K + D I LQ+WD AG ERF ++ +Y+
Sbjct: 44 DFLTKEVQIDDR-IFTLQIWDTAGQERFQSLGVAFYR 79
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYYK 653
++ Q+WD AG ERF +T YY+
Sbjct: 104 VKAQIWDTAGQERFRAVTSAYYR 126
>At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GB:D12541 GI:303736 from
[Pisum sativum]
Length = 237
Score = 31.5 bits (68), Expect = 0.77
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 582 IIRLQLWDIAGXERFGNMTRVYYK 653
+++ Q+WD AG ER+ +T YY+
Sbjct: 76 LVKAQIWDTAGQERYRAVTSAYYR 99
>At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putative
similar to Ras-related protein RAB7 GI:1370186 from
[Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199
(1993); contains Pfam profile: PF00071 Ras family
Length = 206
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K + ++ + LQ+WD AG ERF ++ +Y+
Sbjct: 44 DFLTKEVQFEDR-LFTLQIWDTAGQERFQSLGVAFYR 79
>At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putative
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 543 DFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
DF K + ++ + LQ+WD AG ERF ++ +Y+
Sbjct: 44 DFLTKEVQFEDR-LFTLQIWDTAGQERFQSLGVAFYR 79
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VDF +K + + +L +WD AG E+F +T Y++
Sbjct: 47 VDFKIKQMKVRGKRL-KLTIWDTAGQEKFRTLTSSYFR 83
>At2g17900.1 68415.m02073 zinc finger (MYND type) family protein /
SET domain-containing protein contains Pfam profiles
PF00856: SET domain, PF01753: MYND zinc finger (ZnF)
domain; confirmed by cDNA (Paola Vittorioso--accession
not assigned yet (paola.vittorioso@uniroma1.it)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = -1
Query: 657 FPCNKHASCS---RSAXVLLYPIVAILLWYLSPNSVL 556
F CN H+ C R + L+P+V+I+ SPN+VL
Sbjct: 186 FSCNAHSICDSELRPQGIGLFPLVSIINHSCSPNAVL 222
>At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small
GTP-binding protein identical to Ras-related protein
RHA1 SP:P31582 from [Arabidopsis thaliana]
Length = 200
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 573 SNTIIRLQLWDIAGXERFGNMTRVYYK 653
++ ++ ++WD AG ER+ ++ +YY+
Sbjct: 55 NDATVKFEIWDTAGQERYHSLAPMYYR 81
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 573 SNTIIRLQLWDIAGXERFGNMTRVYYK 653
++ ++ ++WD AG ER+ ++ +YY+
Sbjct: 55 NDATVKFEIWDTAGQERYHSLAPMYYR 81
>At1g04390.1 68414.m00429 expressed protein
Length = 849
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 364 CRRNKSNTPAVHTHRLVLNAGSIYIRS 444
CR +P H+HR++L++G Y+R+
Sbjct: 671 CRMCSLTSPHAHSHRVILSSGCEYLRA 697
>At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3)
identical to atran3 [Arabidopsis thaliana] GI:2058280
Length = 221
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYY 650
IR WD AG E+FG + YY
Sbjct: 62 IRFYCWDTAGQEKFGGLRDGYY 83
>At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A GI:1370182 from
[Lotus japonicus]
Length = 204
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 540 VDFALKVLNWDSNTIIRLQLWDIAGXERFGNMTRVYYK 653
VD K + +I LQ+WD AG ERF ++ +Y+
Sbjct: 40 VDLVTKEICIAERQVI-LQIWDTAGQERFKSLPSRFYR 76
>At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein
(RAN-2) identical to GTP-binding nuclear protein RAN-2
SP:P41917 from [Arabidopsis thaliana]
Length = 221
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYY 650
IR WD AG E+FG + YY
Sbjct: 62 IRFYCWDTAGQEKFGGLRDGYY 83
>At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein
(RAN-1) identical to GTP-binding nuclear protein RAN-1
SP:P41916 from [Arabidopsis thaliana]
Length = 221
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 585 IRLQLWDIAGXERFGNMTRVYY 650
IR WD AG E+FG + YY
Sbjct: 62 IRFYCWDTAGQEKFGGLRDGYY 83
>At2g35340.1 68415.m04333 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1110
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 394 VHTHR-LVLNAGSIYIRSSXIGELGTGKTSIIKRYVHQ 504
++T+R +LNA + +GE G+GKT+ I +Y+H+
Sbjct: 472 IYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHE 509
>At5g09910.1 68418.m01146 GTP-binding protein-related contains weak
similarity to GTP-binding protein yptV3.
(Swiss-Prot:P36862) [Volvox carteri]
Length = 431
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 558 VLNWDSNTIIRLQLWDIAGXERFGNMTRVYY 650
++ DS ++LWD++G ER+ + ++Y
Sbjct: 62 IIKGDSERDFFVELWDVSGHERYKDCRSLFY 92
>At4g38830.1 68417.m05497 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 665
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 262 MCLNFIEKILFNTSSKLSDRIYFCVS*RCVKGLLCRRNK-SNTPAVHTHRLVLNAGSI 432
+ LN ++KIL SS S+ I C++ GLLC + K + P++ + L+L+ +I
Sbjct: 570 VALNLVDKILMTMSSYSSNMIMRCIN----IGLLCVQEKVAERPSMASVVLMLDGHTI 623
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,764,727
Number of Sequences: 28952
Number of extensions: 274206
Number of successful extensions: 658
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2071520424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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