Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C24
         (1007 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    31   0.019
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    29   0.043
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        26   0.53 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.7  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.9  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 30.7 bits (66), Expect = 0.019
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +1

Query: 769 PPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXP-FPPXXLPPS 897
           P +  P P   PP      +  P P  PP PL P FPP  + PS
Sbjct: 155 PSIIDPGPAL-PPTGFLCNNYPPLPQVPPLPLPPIFPPTMINPS 197



 Score = 28.7 bits (61), Expect = 0.075
 Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 9/47 (19%)
 Frame = +1

Query: 805 PXXRPXPSLX-PXPAXPPX--------PLXPFPPXXLPPSXSPAXXN 918
           P   P PS+  P PA PP         PL   PP  LPP   P   N
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMIN 195


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 29.5 bits (63), Expect = 0.043
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 9/47 (19%)
 Frame = +1

Query: 805 PXXRPXPSLX-PXPAXPPX--------PLXPFPPXXLPPSXSPAXXN 918
           P   P PS+  P PA PP         PL   PP  LPP  +P   N
Sbjct: 149 PKYEPNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAPTMIN 195



 Score = 27.5 bits (58), Expect = 0.17
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 769 PPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXP-FPPXXLPPS 897
           P +  P P   PP      +  P P  PP PL P F P  + PS
Sbjct: 155 PSIIDPGPAL-PPAGFLCNNYLPLPQVPPLPLPPIFAPTMINPS 197


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 15/56 (26%), Positives = 17/56 (30%)
 Frame = +1

Query: 727 PXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPP 894
           P     P  G    P    P P        P P++ P    P  P  P     LPP
Sbjct: 379 PFLLNIPSEGIKVEPRDKAPSPYGGQMFEAPIPNVSPHYVTPTPPEAPLFQNVLPP 434


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 540 RLPPPPDQHH 569
           +LPPPP  HH
Sbjct: 734 KLPPPPHPHH 743


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 540 RLPPPPDQHH 569
           +LPPPP  HH
Sbjct: 626 KLPPPPHPHH 635


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 158 KKCFICEICDAIALFVTIISCNKQVN 235
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 181 NFTNKAFFSLH 149
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 181 NFTNKAFFSLH 149
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,621
Number of Sequences: 336
Number of extensions: 2685
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28754374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)