Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C24
(1007 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 40 4e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.064
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 33 0.064
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.19
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.34
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.4
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 28 1.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 1.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.5
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 5.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 40.3 bits (90), Expect = 4e-04
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = +1
Query: 727 PXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSP 906
P P A P +S P P P P PS P PA PP PP LP S +P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSA----PPPPLPASSAP 1741
Query: 907 AXXN 918
+ N
Sbjct: 1742 SVPN 1745
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 769 PPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXS 903
PP+S P P P P P+ P PP P P P S
Sbjct: 1710 PPMSVPPP----PSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRS 1750
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Frame = +1
Query: 649 APPALPVRPCPYGYAXXXXXXXXXXXPXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPS 828
APP+ P P P + P P P + P P + PP +P
Sbjct: 123 APPSAPAPPTPQ--SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Query: 829 LXPXPAXP--PXPLXPFPPXXLPPSXSPA 909
+ P+ P P + P PP PP S A
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Score = 31.1 bits (67), Expect = 0.26
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +1
Query: 763 AXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSP 906
A PP S P P T RP S P P+ PP PP PS +P
Sbjct: 122 AAPP-SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPI---PSKAP 165
Score = 30.7 bits (66), Expect = 0.34
Identities = 30/115 (26%), Positives = 37/115 (32%)
Frame = +1
Query: 520 VAGVFPYGSXPPLTSITXIDASKSEGGRXPRPDYKDTRRFPLEAPPALPVRPCPYGYAXX 699
+ G+F G P L I AS + P + R P APP P P P +
Sbjct: 101 LGGLFA-GGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPR-PSIPPPSPASAP 158
Query: 700 XXXXXXXXXPXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPL 864
P P P A P S P + P P P P P P+
Sbjct: 159 PIPSKAPPIPSSLPPP--AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPV 211
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.004
Identities = 27/89 (30%), Positives = 32/89 (35%)
Frame = +1
Query: 640 PLEAPPALPVRPCPYGYAXXXXXXXXXXXPXXXPXPXGGXXAXPPLSXPXPXTSPPXXRP 819
P+ AP P P P A P P P G PP+ P P +PP +P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV--PKPAAGV---PPV--PPPSEAPPVPKP 1203
Query: 820 XPSLXPXPAXPPXPLXPFPPXXLPPSXSP 906
+ P P P P P LPP P
Sbjct: 1204 SVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 36.7 bits (81), Expect = 0.005
Identities = 26/94 (27%), Positives = 33/94 (35%), Gaps = 4/94 (4%)
Frame = +1
Query: 640 PLEAPPALPVRPCPYGYAXXXXXXXXXXXPXXXPXPXGGXXAXPPL----SXPXPXTSPP 807
P+ AP +P P P A P P P G P P P +PP
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPV--PAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 808 XXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSPA 909
+P + P PA P P P PP +P+
Sbjct: 1142 VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS 1175
Score = 31.1 bits (67), Expect = 0.26
Identities = 33/125 (26%), Positives = 42/125 (33%)
Frame = +1
Query: 535 PYGSXPPLTSITXIDASKSEGGRXPRPDYKDTRRFPLEAPPALPVRPCPYGYAXXXXXXX 714
P G+ P + G P P K + P P+ + P P A
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVP--KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 715 XXXXPXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPP 894
P P P G PP+ P P T+PP P L P P P PP P
Sbjct: 1194 PSEAPPV-PKPSVGV---PPV--PPPSTAPPVPTPSAGLPPVPV----PTAKAPPVPAPS 1243
Query: 895 SXSPA 909
S +P+
Sbjct: 1244 SEAPS 1248
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = +1
Query: 751 GGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSPA 909
G A PP+ P P + P P PA P P P PP P+
Sbjct: 1058 GAPSAPPPV--PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Score = 27.1 bits (57), Expect = 4.2
Identities = 25/119 (21%), Positives = 31/119 (26%), Gaps = 1/119 (0%)
Frame = +1
Query: 553 PLTSITXIDASKSEGGRXPRPDYKDTRRFPLEAPPALPVRPCPYGYAXXXXXXXXXXX-P 729
PL + + S+ P P P+ P P P P P
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAP---PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Query: 730 XXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSP 906
P P + P S P +P P P P P PP P P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.064
Identities = 32/111 (28%), Positives = 37/111 (33%), Gaps = 7/111 (6%)
Frame = +1
Query: 598 GRXPRPDYKDTRRF--PLEAPPALPVRPCP----YGYAXXXXXXXXXXXPXXXPX-PXGG 756
GR P P +R P PPA+P R P G A P P P
Sbjct: 373 GRQP-PPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSL 431
Query: 757 XXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSPA 909
+ PP +PP P P PA P P PP P +PA
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAA-PPLPPAAPAPPPAPA 481
Score = 30.7 bits (66), Expect = 0.34
Identities = 22/81 (27%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +1
Query: 640 PLEAPPALPVRPCPYGYAXXXXXXXXXXXPXXXPXPXGGXXAXP-PLSXPX-PXTSPPXX 813
P+ PP+LP P P P P A P P P P P
Sbjct: 416 PVPTPPSLPPS-APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 814 RPXPSLXPXPAXPPXPLXPFP 876
P P+ P PA P + P
Sbjct: 475 APPPAPAPAPAAPVASIAELP 495
Score = 29.5 bits (63), Expect = 0.78
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +1
Query: 727 PXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSP 906
P P G A PPL P +PP P+ P P P P PP P +P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPI-APPLPAGMPAAPPLPPAAPAP----PPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 727 PXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPP 855
P P P G + PP S P P +P P + P PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRP-IAPVSMNPAINSTSKPPLPP 294
Score = 27.1 bits (57), Expect = 4.2
Identities = 18/66 (27%), Positives = 21/66 (31%), Gaps = 5/66 (7%)
Frame = +1
Query: 727 PXXXPXPXG---GXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPL--XPFPPXXLP 891
P P P G PP P PP P P P + P PP +P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 892 PSXSPA 909
+PA
Sbjct: 397 GRSAPA 402
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 629 PGVSPWKPPXRSPSDPALTDTPSSDXXYXXSSSPXXHPPR 748
P + +PP R PS A P SSP PPR
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPR 273
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/61 (24%), Positives = 20/61 (32%)
Frame = +1
Query: 727 PXXXPXPXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSP 906
P P P PP+ +S P P P + P P P PP +P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 907 A 909
+
Sbjct: 371 S 371
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 33.1 bits (72), Expect = 0.064
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +1
Query: 769 PPLSXPXPXTSPPXXRPX-PSLX--PXPAXPPXPLXPFPPXXLPPSXSP 906
PPL P T+P P P P PA PP P PF P PP P
Sbjct: 140 PPLYHPAA-TAPSEFMPSIPGFGNLPNPAMPPIPFLPFNPAAQPPFPPP 187
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/62 (32%), Positives = 21/62 (33%)
Frame = -1
Query: 905 GXXEGGRXXGGKGXRGXGGXAGXGXXEGXGRXXGGEVXGXGXERGGXAXKPPXGXGXXXG 726
G GGR G G GG G G G GG G G RGG G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR-GGRGGARGGRGGSSGGRGGAKGG 70
Query: 725 TR 720
+
Sbjct: 71 AK 72
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -1
Query: 878 GGKGXRGXGGXAGXGXXEGXGRXXGGEVXGXGXERGGXAXKPPXGXGXXXGTR 720
G +G RG G G G G GR GG G G RGG G G G R
Sbjct: 6 GSRGGRG-GSRGGRGGFNG-GR--GGFGGGRGGARGGGRGGARGGRGGRGGAR 54
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 826 RGG-GGXXGGRXGGXAXRGAGXRXSPXXGXVXRGGRG 719
RGG GG GGR G RG RGGRG
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG 51
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 823 GGGGXXGGRXGGXAXRGAGXRXSPXXGXVXRGGRG 719
G GG GGR G G R RGGRG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRG 58
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.34
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 790 PXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPP 894
P P P P+ P P PP P+ PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 784 PXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLP 891
P P P P P P P PP P P P LP
Sbjct: 102 PLPREPPLPNEPVPE-EPLPGEPPLPDEPVPEEPLP 136
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 769 PPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFP 876
P P P P P P P P PP P P P
Sbjct: 113 PVPEEPLPGEPPLPDEPVPE-EPLPGEPPLPNEPVP 147
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 620 IKIPGVSPWKPPXRSPSDPALTDTPSSDXXYXXSSSPXXHPPR 748
I+ P +P PP + P+DPA+ S+ Y + + PP+
Sbjct: 76 IEEPATTPSAPPVQPPNDPAIIG--SNSGQYNWNQAQTAQPPQ 116
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Frame = +1
Query: 769 PPLSXPXPXTSPPXXRPXP-SLXP---XPAXPPXPLXPFPPXXLPP 894
PPL P P + P RP P P P P P P P PP
Sbjct: 139 PPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPP 184
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +1
Query: 745 PXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPS 897
P P +S P SPP PS P P PP PP+
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPA 198
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/51 (27%), Positives = 20/51 (39%)
Frame = +1
Query: 745 PXGGXXAXPPLSXPXPXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPS 897
P G P P +PP P P++ P PP P+ +PP+
Sbjct: 712 PMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHP--PPPPVRSSISPSMPPA 760
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +1
Query: 790 PXTSPPXXRPXPSLXPXPAXPPXPLXPFPPXXLPPSXSP 906
P + P ++ P PA L P PP LP + +P
Sbjct: 227 PAVNHPMAGQPIAIAPVPAPNQAALPPIPPQALPANGTP 265
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,633
Number of Sequences: 5004
Number of extensions: 39998
Number of successful extensions: 218
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 523262732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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