Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C23
(989 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 48 1e-05
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 48 2e-05
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 47 2e-05
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 47 2e-05
02_05_0939 + 32914936-32915055,32916674-32916823,32917160-329173... 47 2e-05
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 46 5e-05
10_07_0081 - 12716130-12716271,12716367-12716449,12716729-127167... 44 2e-04
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 44 2e-04
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 43 3e-04
07_03_0902 - 22435692-22436156,22436684-22436923,22437228-224373... 42 8e-04
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 40 0.002
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 40 0.003
10_08_0448 + 18015609-18016052,18017147-18017248,18017332-180174... 36 0.038
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 31 1.4
07_01_0066 - 470595-470724,470877-471040,471552-471593,471730-47... 30 2.5
07_01_1181 + 11203073-11203604,11204124-11204143 29 4.3
07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149 29 5.7
03_02_0797 - 11296426-11297258,11297745-11297901 29 5.7
05_04_0264 + 19537582-19537919,19539670-19539826,19539939-195400... 29 7.6
03_01_0297 + 2295291-2296369,2310477-2310702,2312269-2313216 29 7.6
>02_04_0157 +
20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 48.0 bits (109), Expect = 1e-05
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +1
Query: 157 LDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLA 336
+++ Y++G TKVF RAG + +++ R + LS S +Q +R YL+ K + +L+
Sbjct: 717 VNLTGYQIGKTKVFLRAGQMAELDARRTEVLSSSASKIQRKVRSYLAHKHFIQLRLSATQ 776
Query: 337 LQVVQR 354
LQ V R
Sbjct: 777 LQAVCR 782
>03_05_0728 -
27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 47.6 bits (108), Expect = 2e-05
Identities = 25/68 (36%), Positives = 39/68 (57%)
Frame = +1
Query: 139 ILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKL 318
ILE GL E+Y++G TKVF RAG + ++ R + L + +Q I Y++RK++ L
Sbjct: 688 ILEKMGL--ENYQIGKTKVFLRAGQMADLDARRAEVLGRAARIIQRQISTYIARKQFVSL 745
Query: 319 QEQRLALQ 342
+ LQ
Sbjct: 746 RRSATQLQ 753
>10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +1
Query: 121 RKLLNVILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSR 300
R L ILE LD +++LG TKVF RAG + ++ R + L +Q R +++R
Sbjct: 803 RALTKGILEKMKLD--NFQLGSTKVFLRAGQIAILDMRRAEVLENAARHIQGRFRTFITR 860
Query: 301 KEYKKLQEQRLALQVVQR 354
KE+ K +E +++Q R
Sbjct: 861 KEFVKTREASISIQAYCR 878
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/59 (33%), Positives = 37/59 (62%)
Frame = +1
Query: 178 LGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLALQVVQR 354
+G TKVF RAG + +++ R++ L + + +Q +R +L++K + KLQ + LQ + R
Sbjct: 741 IGKTKVFLRAGQMAELDARRNEVLGRSANMIQRKVRSFLAQKNFIKLQRSAVQLQTICR 799
>02_05_0939 +
32914936-32915055,32916674-32916823,32917160-32917305,
32917396-32917552,32917695-32917753,32918180-32918291,
32918901-32919050,32919180-32919316,32919977-32920123,
32920197-32920298,32920674-32920731,32920840-32920941,
32921905-32921942,32922031-32922157,32922228-32922401,
32922542-32922628,32923838-32923947,32924654-32924714,
32925338-32925515,32925628-32925833,32926108-32926227,
32927202-32927423,32927708-32927847,32927976-32928087,
32928254-32928304,32928384-32928473,32928630-32928800,
32928897-32929049,32929860-32930036,32930131-32930268,
32930363-32930433,32930837-32930936,32931156-32931212,
32931301-32931357,32931451-32931531,32931614-32931696,
32931831-32931966
Length = 1459
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = +1
Query: 121 RKLLNVILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSR 300
R L ILE + +E+++LG TKVF RAG + ++ R + L +Q R +++R
Sbjct: 663 RALTKGILEK--MKLENFQLGSTKVFLRAGQIAILDMRRAEVLENAARHIQGRFRTFITR 720
Query: 301 KEYKKLQEQRLALQVVQR 354
KE+ K +E +++Q R
Sbjct: 721 KEFVKTREASISIQAYCR 738
>03_06_0766 -
36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 46.0 bits (104), Expect = 5e-05
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 160 DVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLAL 339
++ Y++G TKVF RAG + +++ LR + L +Q +R +++RK+Y LQ L
Sbjct: 705 NLTGYQIGKTKVFLRAGQMAELDALRTEILGLSAKKIQTKVRSHVARKKYVMLQHFATQL 764
Query: 340 Q 342
Q
Sbjct: 765 Q 765
>10_07_0081 -
12716130-12716271,12716367-12716449,12716729-12716785,
12716886-12716942,12717014-12717113,12717204-12717274,
12718284-12718460,12719142-12719312,12722151-12722234,
12722310-12722354,12722447-12722537,12722745-12722863,
12723213-12723434,12723630-12723854,12725366-12725571,
12726081-12726258,12726702-12726762,12727930-12728039,
12728126-12728257,12729136-12729208,12729608-12729645,
12730373-12730474,12730565-12730622,12731071-12731172,
12731240-12731386,12732023-12732159,12732256-12732405,
12733103-12733259,12733615-12733673,12733982-12734138,
12734209-12734354,12739177-12739320,12739478-12739606
Length = 1309
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = +1
Query: 157 LDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLA 336
L +E+++LG TKVF RAG + ++ R + L K +Q R +++ KE+ ++ ++
Sbjct: 628 LHLENFQLGRTKVFLRAGQIAVLDSKRTEILEKAARIVQGRFRTFVACKEFHSTKKASVS 687
Query: 337 LQVVQR 354
LQ R
Sbjct: 688 LQAYCR 693
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +1
Query: 139 ILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKL 318
ILE GL +++G TKVF RAG + +++ R + L +Q IR ++ RK++
Sbjct: 1242 ILEKKGL--VGFQIGKTKVFLRAGQMAELDARRTEVLGAAAKTIQGKIRTHIMRKKFVNW 1299
Query: 319 QEQRLALQVVQR 354
++ +++Q + R
Sbjct: 1300 RKASISVQAIWR 1311
>03_05_1124 + 30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 157 LDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLA 336
+ ++ Y++G TKVF RAG + +++ R + L+ +Q I+ +L+RKE+ L++ +
Sbjct: 990 MGLKGYQIGKTKVFLRAGQMAELDARRAEVLANAARLIQRRIKTHLTRKEFINLRKASIQ 1049
Query: 337 LQ 342
Q
Sbjct: 1050 SQ 1051
>07_03_0902 - 22435692-22436156,22436684-22436923,22437228-22437349,
22437441-22437587,22437753-22437882,22437981-22438116,
22438223-22438428,22438644-22438844,22438999-22439157,
22439781-22439858,22440453-22440542,22440625-22440777,
22440873-22440991,22441190-22441328,22441422-22441525,
22441944-22441989,22442087-22442252,22442356-22442383,
22442460-22442610,22442686-22442829,22442912-22443013,
22443566-22444093
Length = 1217
Score = 41.9 bits (94), Expect = 8e-04
Identities = 21/75 (28%), Positives = 41/75 (54%)
Frame = +1
Query: 118 PRKLLNVILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLS 297
P + +L+ + E Y++G+TK+F R G + +E ++ L + +Q RG +
Sbjct: 819 PLSISVAVLQQFNIPPEMYQVGYTKLFLRTGQVAALENAKNRMLHGALR-IQKNFRGLCT 877
Query: 298 RKEYKKLQEQRLALQ 342
R+EY+ L++ + LQ
Sbjct: 878 RQEYQGLKKGAMTLQ 892
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 253 KIVSWLQAYIRGYLSRKEYKKLQEQR 330
K V LQ+ +RG L+RK+YK L+E++
Sbjct: 935 KYVVLLQSVMRGCLARKKYKCLKEEK 960
>05_06_0219 +
26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/68 (27%), Positives = 40/68 (58%)
Frame = +1
Query: 139 ILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKL 318
IL+ GL + Y++G TKVF RAG + +++ R + ++ +Q+ R +++R+++ L
Sbjct: 739 ILDKMGL--QGYQIGRTKVFLRAGQMAELDARRTEVQNRAARAVQSRFRTHVAREQFLML 796
Query: 319 QEQRLALQ 342
++ Q
Sbjct: 797 HNTSISFQ 804
>01_06_0481 -
29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +1
Query: 139 ILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKL 318
+L+ GL + Y++G TKVF RAG + +++ R + + +Q R +++R+++ L
Sbjct: 701 VLDKMGL--QGYQIGRTKVFLRAGQMAELDARRTEVRNNAARGVQGQFRTHVAREQFLIL 758
Query: 319 QEQRLALQ 342
+ + LQ
Sbjct: 759 RNASVCLQ 766
>10_08_0448 +
18015609-18016052,18017147-18017248,18017332-18017475,
18017555-18017705,18017793-18017820,18018456-18018621,
18018701-18018764,18019320-18019423,18019572-18019710,
18020114-18020232,18020333-18020485,18020565-18020654,
18020952-18021029,18021671-18021829,18021914-18022117,
18022209-18022414,18022495-18022630,18022859-18022898,
18023329-18023408,18023569-18024228
Length = 1088
Score = 36.3 bits (80), Expect = 0.038
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 118 PRKLLNVILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKI 258
P + IL + E Y++G+TK+FFR G +G++E+ R+ L I
Sbjct: 798 PLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGKLEDTRNRTLHGI 844
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 141 LGGHGLGCRVLPSRSHQGILPRWCPGSDGRA 233
LGG G G L + PRWC GS G A
Sbjct: 21 LGGGGSGADALRPAARLSFAPRWCGGSAGAA 51
>07_01_0066 -
470595-470724,470877-471040,471552-471593,471730-471771,
472147-472246,472396-472460,473015-473101,473795-473873,
474490-474558,476290-476474
Length = 320
Score = 30.3 bits (65), Expect = 2.5
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +1
Query: 214 LGQMEELRDDRLSKIVSWLQAYIRGYLS--RKEYKKLQEQRLALQVV----QRNLRK*LQ 375
L Q+E+ + L I+S + +S +K+ + LQE+ ALQ Q+N+R Q
Sbjct: 177 LQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVRGQQQ 236
Query: 376 XRTWPXVXTVAEGQASPQ 429
W A+ QA PQ
Sbjct: 237 VGQWDQTQVQAQAQAQPQ 254
>07_01_1181 + 11203073-11203604,11204124-11204143
Length = 183
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 71 PLQDPGPSSCGQGI*SQENCSMSSWR 148
PL+ PG S G G S + S SSWR
Sbjct: 18 PLRTPGTPSAGAGAASSSSSSSSSWR 43
>07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149
Length = 282
Score = 29.1 bits (62), Expect = 5.7
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -2
Query: 406 PQXPPG--ARCGXAVTCASCAGQLGEPISAPA-ASCTPYGTSNRGCK 275
P+ P G + CG C +C G G P +AP A C P +S RGCK
Sbjct: 216 PKWPCGGPSYCGG---CGTCRGG-GWPAAAPMQAMCCPGPSSCRGCK 258
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 406 PQXP-PGARCGXAVTCASCAGQLGEPISAPAASCTPYGTSNRGCKPGAMIR-SW 251
P+ P P A C A CA+ G AP S T G+S+ GA + SW
Sbjct: 186 PELPAPDASCWPAEYCAAAGGAQSGGTPAPELSSTTAGSSSLSTDSGAGAQPSW 239
>05_04_0264 +
19537582-19537919,19539670-19539826,19539939-19540092,
19540281-19540417
Length = 261
Score = 28.7 bits (61), Expect = 7.6
Identities = 24/76 (31%), Positives = 31/76 (40%)
Frame = -2
Query: 397 PPGARCGXAVTCASCAGQLGEPISAPAASCTPYGTSNRGCKPGAMIRSWRACHHAALPSD 218
P G R +TCA+C G LG + TP T R C ++ A L SD
Sbjct: 168 PDGRRI--EITCAACGGHLGHVFKGEGFN-TP--TDERHCVNSISLKFIPASEDILLFSD 222
Query: 217 PGHQRGRIPWCDRDGR 170
+QR P+ GR
Sbjct: 223 --NQRSSYPYIIEHGR 236
>03_01_0297 + 2295291-2296369,2310477-2310702,2312269-2313216
Length = 750
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = -2
Query: 355 CAGQLGEPISAPAASCTPYGTSNRGCKPGAMIRSWRACHHAALPSDPGHQR 203
C G + EPI + RGC P +I+ + A L ++ G R
Sbjct: 461 CCGNIAEPIGNSLGQFNLVYGAKRGCIPTCVIKVYHAARSFVLLNNDGEYR 511
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,231,798
Number of Sequences: 37544
Number of extensions: 358794
Number of successful extensions: 1236
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2893540780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -