Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C23
(989 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 109 3e-24
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 3e-17
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 1e-14
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_42254| Best HMM Match : PH (HMM E-Value=5.5e-19) 39 0.005
SB_42003| Best HMM Match : IQ (HMM E-Value=0.15) 39 0.005
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 35 0.12
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_40744| Best HMM Match : Myosin_head (HMM E-Value=4.7e-09) 31 1.4
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 31 1.9
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 30 2.5
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_55416| Best HMM Match : D123 (HMM E-Value=0) 29 5.8
SB_7313| Best HMM Match : IQ (HMM E-Value=0.00059) 29 5.8
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 109 bits (262), Expect = 3e-24
Identities = 49/89 (55%), Positives = 66/89 (74%)
Frame = +1
Query: 121 RKLLNVILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSR 300
+K +L A L+ YR+G TKVFFRAGVLG +E+LRDDRL+KI+S QAY +G+L R
Sbjct: 730 KKACEKLLAAIQLEENEYRIGTTKVFFRAGVLGHLEDLRDDRLAKIISMFQAYCKGFLMR 789
Query: 301 KEYKKLQEQRLALQVVQRNLRK*LQXRTW 387
KEY+K+ +QR+ + V+QRN+RK L R W
Sbjct: 790 KEYRKMCDQRIGISVIQRNVRKYLYLRNW 818
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 42 NRXVYPDFKLRYKILAPQAVDKE-SDPKKIAQ 134
NR + +FK RY+ILAP AV + D KK +
Sbjct: 703 NRIPFQEFKQRYQILAPTAVSGQFMDGKKACE 734
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 86.6 bits (205), Expect = 3e-17
Identities = 40/89 (44%), Positives = 61/89 (68%)
Frame = +1
Query: 121 RKLLNVILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSR 300
RK +L++ LD SYR+G +K+FFRAGVL +EE RD +L++I++ QA+ RG ++R
Sbjct: 775 RKACEKMLQSLELDSNSYRIGQSKIFFRAGVLAHLEEERDIKLTEIITIFQAFCRGNIAR 834
Query: 301 KEYKKLQEQRLALQVVQRNLRK*LQXRTW 387
K+Y K +Q A++V+QRN L+ R W
Sbjct: 835 KQYHKRVQQLSAIRVIQRNCLSYLKLRNW 863
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 395 WXLWQKVKPLLXVXRIEDEI 454
W L+ KVKPLL V R E+E+
Sbjct: 866 WRLFTKVKPLLNVTRQEEEL 885
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 78.2 bits (184), Expect = 1e-14
Identities = 37/80 (46%), Positives = 55/80 (68%)
Frame = +1
Query: 121 RKLLNVILEATGLDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSR 300
+K + ++L LD SYRLG +++FFRAG L Q+E+ RD++ + + LQAY RG+L+R
Sbjct: 1735 KKGVELLLSHLELDQRSYRLGLSQIFFRAGSLAQLEDARDEKTTGTIVELQAYCRGFLAR 1794
Query: 301 KEYKKLQEQRLALQVVQRNL 360
K KKLQ Q A+ +QRN+
Sbjct: 1795 KRLKKLQVQNKAMICIQRNI 1814
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 157 LDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLA 336
L ++LG TK+F + Q+EE RD L+ +Q +RG+L+RK Y +++ +
Sbjct: 652 LSNSDWQLGKTKIFLKDAQDQQLEEHRDRLLTSRAILIQKVVRGFLTRKVYLRMRMGAVM 711
Query: 337 LQ 342
+Q
Sbjct: 712 IQ 713
>SB_42254| Best HMM Match : PH (HMM E-Value=5.5e-19)
Length = 996
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 160 DVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLAL 339
D +++G+TK F + + ME R+ L + ++ I GYL RK+Y K++ + L
Sbjct: 86 DGTQWKIGNTKAFMKDRLDFSMERKRNAELEVVAMVIKKRIMGYLVRKKYLKIRNDVILL 145
Query: 340 QVVQR 354
Q + +
Sbjct: 146 QKIAK 150
>SB_42003| Best HMM Match : IQ (HMM E-Value=0.15)
Length = 306
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +1
Query: 160 DVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLAL 339
D +++G+TK F + + ME R+ L + ++ I GYL RK+Y K++ + L
Sbjct: 125 DGTQWKIGNTKAFMKDRLDFSMERKRNAELEVVAMVIKKRIMGYLVRKKYLKIRNDVILL 184
Query: 340 QVVQR 354
Q + +
Sbjct: 185 QKIAK 189
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 34.7 bits (76), Expect = 0.12
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 226 EELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQ 327
EE R DR +K +QA RGY +RKEYK +E+
Sbjct: 420 EERRKDREAKAAVTIQAATRGYFARKEYKCEREK 453
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 32.3 bits (70), Expect = 0.63
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 SSC-GQGI*SQENCSMSSWRPRAWMSSPTVSVTPRYSSALVSWVRWKSCVMTGSPRSYHG 268
SSC G + + S+ SW+ + + S T ++TP +AL++ R + ++ G G
Sbjct: 1096 SSCNGMQVYLLKPWSLKSWQ-QDYTSESTTNITPDGKAALLATARERGNILCGPVELESG 1154
Query: 269 SRLTSAVTCP 298
S +TCP
Sbjct: 1155 SSSRVVLTCP 1164
>SB_40744| Best HMM Match : Myosin_head (HMM E-Value=4.7e-09)
Length = 525
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 157 LDVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLA 336
L E+++LG ++F + +EE R LS + +LQ +R YL + ++ ++ +
Sbjct: 279 LGQENWKLGTKRIFLKESQDVLLEESRAQLLSSKIIFLQRAMRRYLRMRRARRTRKGAVL 338
Query: 337 LQVVQRNLR 363
+Q R R
Sbjct: 339 IQSRWRGYR 347
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 172 YRLGHTKVFFR-AGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKK 315
Y G TK+F R L +EE R D + + +Q RG+ +K+ +K
Sbjct: 642 YAYGRTKIFIRNPRTLFALEEKRKDGMEDLAVIIQKIFRGWRRKKQARK 690
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 30.3 bits (65), Expect = 2.5
Identities = 24/93 (25%), Positives = 31/93 (33%)
Frame = +2
Query: 572 RPTSKETXVSLAENPGAXYQAPGPER*SPXTTSXXPQDRLPXXEXARQXXCSNLPRXSNQ 751
RPT + T L E Q P P + P T P +R P + + P +
Sbjct: 143 RPTERPTKSLLPEEEEKERQTPTPTKAKPTTIKRRPTER-PTKKPTKPLLPEVEPEEEER 201
Query: 752 EXXXPXXDVPRTWKLLRTHXRTPXTXPTXHXIP 850
P P T K R P PT +P
Sbjct: 202 ATPRPTKAKPTTMK--RRPTERPTKKPTKPLLP 232
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 29.5 bits (63), Expect = 4.4
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 268 LQAYIRGYLSRKEYKKLQEQRLALQVVQRNLR 363
LQA IRGYL+RKE + +QR A ++Q +R
Sbjct: 1694 LQAAIRGYLARKE---IAQQRHAAVIIQTAVR 1722
Score = 29.5 bits (63), Expect = 4.4
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 199 FRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQ 321
+RA V G+ E R K V +QA++RG ++RKE K L+
Sbjct: 1890 YRALVKGRREAERYMVTRKAVLTVQAFLRGMVARKEVKCLR 1930
Score = 29.1 bits (62), Expect = 5.8
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 160 DVESYRLGHTKVFFRAGVLGQMEELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLAL 339
+ E Y + V L M ++ + + +QA RGY +RKEY + + +
Sbjct: 1899 EAERYMVTRKAVLTVQAFLRGMVARKEVKCLRAAVRIQACYRGYTARKEYSRCVTSIVLM 1958
Query: 340 Q-VVQRNL 360
Q +V+RNL
Sbjct: 1959 QALVRRNL 1966
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 193 VFFRAGVLGQM--EELRDDRLSKIVSWLQAYIRGYLSRKEYKKLQEQRLALQ 342
+ +A + G + +E+ R + ++ +Q +RGY+ +K+Y K++ A+Q
Sbjct: 1692 ITLQAAIRGYLARKEIAQQRHAAVI--IQTAVRGYMRKKDYMKMKHATTAIQ 1741
>SB_55416| Best HMM Match : D123 (HMM E-Value=0)
Length = 329
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 122 ENCSMSSWRPRAWMSSPTVSVTPRYSSALVSWVRWKSCVMTGSPRS 259
ENC+ SSW PR + + P S V +++ V+ G P S
Sbjct: 7 ENCNFSSWYPRFKNVTIRSKIIP-LSKEFVDYLKTDGVVLPGKPSS 51
>SB_7313| Best HMM Match : IQ (HMM E-Value=0.00059)
Length = 104
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +1
Query: 268 LQAYIRGYLSRKEYKKLQEQRLALQVVQRNLRK 366
+Q YIR +L++K+ KKL++++ + + L+K
Sbjct: 16 IQKYIRRHLAKKQLKKLKDEKQNYEEMMEKLQK 48
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,651,796
Number of Sequences: 59808
Number of extensions: 369164
Number of successful extensions: 1053
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2943548647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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