Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C21
(952 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 84 1e-16
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 66 3e-11
SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09) 62 6e-10
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 38 0.012
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 35 0.084
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.26
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 32 0.59
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 31 1.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 2.4
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 2.4
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 30 3.2
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.2
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 4.2
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 5.5
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 28 9.6
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = +1
Query: 259 MGXGSFKYAWVLXXLKAXRERGIXIDIALWKFETSXYYVTIIDAPG 396
MG GSFKYAWVL LKA RERGI IDIALWKFET YYVT+IDAPG
Sbjct: 1 MGKGSFKYAWVLDKLKAERERGITIDIALWKFETLKYYVTVIDAPG 46
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 66.5 bits (155), Expect = 3e-11
Identities = 33/90 (36%), Positives = 48/90 (53%)
Frame = +3
Query: 399 RXFXKNMXXGTSQADCAVLIVAAGTGEFEAGXSKNGXTREXALLAFXLGVXXLXVGVHXM 578
+ F NM G +QAD VL+++A GEFE G + G TRE A+LA GV L + V+ M
Sbjct: 233 KSFVPNMISGATQADLGVLVISARKGEFETGFERGGQTREHAMLAKTAGVKHLVILVNKM 292
Query: 579 DXXXXXYREPRFEXXXXXVSSYXTXXGXHP 668
D + E R+E ++ + G +P
Sbjct: 293 DDPTVKWNEERYEEIKVKLTPFLKKVGFNP 322
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +1
Query: 199 YKCGGIDXRTXEKFEKXAXXMGXGSFKYAWVLXXLKAXRERGIXIDIALWKFETSXYYVT 378
Y G +D RT EK+E+ A ++ +W L + R++G +++ F+T + T
Sbjct: 166 YLTGQVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGNTVEVGRAAFDTDTKHFT 225
Query: 379 IIDAPG 396
++DAPG
Sbjct: 226 LLDAPG 231
>SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09)
Length = 123
Score = 62.1 bits (144), Expect = 6e-10
Identities = 31/67 (46%), Positives = 39/67 (58%)
Frame = +3
Query: 399 RXFXKNMXXGTSQADCAVLIVAAGTGEFEAGXSKNGXTREXALLAFXLGVXXLXVGVHXM 578
+ F NM G +QAD A+L+V A TGEFEAG G TRE A+L LGV L V ++ +
Sbjct: 24 KDFIPNMITGAAQADVAILVVDAITGEFEAGFESGGQTREHAILVRSLGVTQLIVAINKL 83
Query: 579 DXXXXXY 599
D Y
Sbjct: 84 DMVVLGY 90
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3
Query: 135 INIVVIGXVDSGKSTTTGSL 194
INIVVIG VDSGKSTTTG L
Sbjct: 8 INIVVIGHVDSGKSTTTGHL 27
Score = 36.7 bits (81), Expect = 0.028
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 196 IYKCGGIDXRTXEKFEK 246
IYKCGGID RT EKFEK
Sbjct: 28 IYKCGGIDKRTIEKFEK 44
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 35.1 bits (77), Expect = 0.084
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPX-TLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGX 865
P P PAT PPP + + P + A + P P PP PP P+
Sbjct: 154 PPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPPILEL 213
Query: 866 XSPP 877
+PP
Sbjct: 214 AAPP 217
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/71 (25%), Positives = 20/71 (28%)
Frame = +2
Query: 665 PXXCPLSCPXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXX 844
P P P P PAT PPP + + P P P P
Sbjct: 120 PSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVPAP 179
Query: 845 TRPLPGXXSPP 877
PL PP
Sbjct: 180 AVPLAAASPPP 190
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.5 bits (73), Expect = 0.26
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXX 868
P P P PPP P S P P P PP PP P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 869 SPP 877
PP
Sbjct: 429 PPP 431
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/66 (28%), Positives = 20/66 (30%)
Frame = +2
Query: 680 LSCPXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLP 859
+S P P P PPP P P P P PP PP P P
Sbjct: 363 MSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Query: 860 GXXSPP 877
PP
Sbjct: 423 PPPPPP 428
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXX 868
P P P PPP P P P P PP PP P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 869 SPP 877
PP
Sbjct: 428 PPP 430
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXX 868
P P P PPP P P P P PP PP P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 869 SPP 877
PP
Sbjct: 427 PPP 429
Score = 30.7 bits (66), Expect = 1.8
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Frame = +2
Query: 665 PXXCPLSCPXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXX 844
P P S P P P PPPQ P P P P PP PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP---PPPPPPPPPPPPPPAPPPPPPPP 427
Query: 845 TRPLPG---XXSPPXL 883
P P +PP L
Sbjct: 428 PPPPPALRLACAPPRL 443
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXX 868
P P P + PPP P P P P PP P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 869 SPPXL 883
PP L
Sbjct: 430 PPPAL 434
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 32.3 bits (70), Expect = 0.59
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXX 868
P P P+ P P MP + P T + P P + PP PP + P P
Sbjct: 231 PAPPNPSKAIATPNPPMPETPLPPAT-----PNPFIPPASPNPSIPPAPPNPSIPAPPNP 285
Query: 869 SPP 877
S P
Sbjct: 286 SIP 288
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +2
Query: 728 PPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLP 859
P P P T+ T + AP P T PP PP PLP
Sbjct: 172 PETKPPKPPAPSTIPTPPTP-PAPPSPPIPTAPPTPPMPETPLP 214
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 31.5 bits (68), Expect = 1.0
Identities = 22/71 (30%), Positives = 26/71 (36%)
Frame = +2
Query: 665 PXXCPLSCPXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXX 844
P C +CP PA A PPP P P + T ++ H PP PP
Sbjct: 88 PTSCAPACP-PACCAPPPPPPPPPPPPPPPPPPPI-TLHHEQHVVSHVMHPAPPPPPP-- 143
Query: 845 TRPLPGXXSPP 877
P P PP
Sbjct: 144 --PPPAPCMPP 152
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 729 PPKCPXPSXXRXPSXRPXLTAPPHXTXPXIXPXLXHXPXP 848
P + P PS PS RP +TA P P P P P
Sbjct: 1586 PSRLPPPSLHIRPSDRPGMTATPPPPLPTRRPSSCSRPAP 1625
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = +2
Query: 665 PXXCPLSCPXPAGPATXCXXPP-PQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPX 841
P P + P P P PP P P P + AP P + PP PP
Sbjct: 131 PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPN---APYPPPPYPPPPNPPY 187
Query: 842 XTRPLPGXXSPP 877
P P PP
Sbjct: 188 PPPPNPPYPPPP 199
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/72 (26%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +2
Query: 665 PXXCPLSCPXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPX-HTXPPXPPX 841
P P P P P PP P + P + P + P + PP PP
Sbjct: 110 PPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPP 169
Query: 842 XTRPLPGXXSPP 877
P P PP
Sbjct: 170 PNAPYPPPPYPP 181
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +2
Query: 665 PXXCPLSCPXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHT--XPPXPP 838
P P + P P P PP P + P P + P PP PP
Sbjct: 165 PNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPP 224
Query: 839 XXTRPLPGXXSPP 877
P P PP
Sbjct: 225 PPNAPNPPYPPPP 237
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/67 (31%), Positives = 26/67 (38%)
Frame = +2
Query: 659 VXPXXCPLSCPXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPP 838
V P P + P P+ P PPP P +K P T + P P + PP PP
Sbjct: 344 VNPPPPPTNNP-PSPPPPTNNTPPPPPPTNKPPPPPPPT---NGPPPPPPPTNGPPPPPP 399
Query: 839 XXTRPLP 859
P P
Sbjct: 400 PTNGPPP 406
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTX-PPXPPXXTRPLPGX 865
P P P PPP P SK P T T + P P PP PP RP G
Sbjct: 329 PLPPPPLRGQIAPPPP-PISK--PPT-STRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGK 384
Query: 866 XSPP 877
+PP
Sbjct: 385 INPP 388
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 30.3 bits (65), Expect = 2.4
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTX-PPXPPXXTRPLPGX 865
P P P PPP P SK P T T + P P PP PP RP G
Sbjct: 241 PLPPPPLRGQIAPPPP-PISK--PPT-STRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGK 296
Query: 866 XSPP 877
+PP
Sbjct: 297 INPP 300
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 729 PPKCPXPSXXRXPSXRPXLTAPPHXTXPXIXPXLXHXPXPAP 854
PP P P PS P + APP P P H P AP
Sbjct: 2170 PPSVPPPMGA-PPSGPPPMGAPPSGPPPMGTPPSGHPPMGAP 2210
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 750 SXXRXPSXRPXLTAPPHXTXPXIXPXLXHXPXPAPSP 860
S R S R L PP P P L P PAP+P
Sbjct: 21 SRARPSSTRTKLAVPPIPHGPRPLPPLREPPTPAPTP 57
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/63 (25%), Positives = 21/63 (33%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXX 868
P + P PPP + P + P PP PP + P PG
Sbjct: 910 PSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGG 969
Query: 869 SPP 877
+PP
Sbjct: 970 APP 972
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 729 PPKCPXPSXXRXPSXRPX-LTAPPHXTXPXIXPXLXHXPXPAPSP 860
PP P PS S P +TAPP P + P PA +P
Sbjct: 537 PPPAPPPSVFAPSSGVPTPVTAPPPAPPPSVFAPSSAVPTPATAP 581
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = +2
Query: 695 PAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXXSP 874
P A+ PPP P P + + + P PP PP T LP P
Sbjct: 270 PIPSASQNATPPPPPPPPSNTPG-MFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPPPP 328
Query: 875 P 877
P
Sbjct: 329 P 329
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +2
Query: 689 PXPAGPATXCXXPPPQMPXSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPXXTRPLPGXX 868
P P+ PA PPP P + AP P PP PP P P
Sbjct: 53 PPPSPPAAAPAAPPPPAAAPAAPPPPA----APPAAPPPPPPLPAPPPPPAQPAPQPPPA 108
Query: 869 SPPXL 883
P L
Sbjct: 109 PPHFL 113
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 28.3 bits (60), Expect = 9.6
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +2
Query: 665 PXXCPLSCPXPAGPATXCXXPPPQMP-XSKXXPXTLXTAXSDRXAPXHXPXHTXPPXPPX 841
P P++ P GP PPQ+P P S P P + PP P
Sbjct: 105 PTSQPVAYGYPTGPPPPYSPIPPQVPYPGAAGPPMPHPTASVYPPPGGYPPTSYPP-QPY 163
Query: 842 XTRPLPGXXSPP 877
+P P PP
Sbjct: 164 PAQPYPQQGYPP 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,748,969
Number of Sequences: 59808
Number of extensions: 185677
Number of successful extensions: 756
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2788625034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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