Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C20
         (933 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   7.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 875  PPPPPXXSXPPXPXPXPP 928
            PP PP    PP P    P
Sbjct: 1376 PPIPPTSEKPPLPEELKP 1393


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 728 PXXPPXYATCSRHGP 772
           P  PP + TC  H P
Sbjct: 694 PPVPPNFPTCGDHVP 708


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 883 PPXPXXPPXPXP 918
           PP P  PP P P
Sbjct: 175 PPLPQVPPLPLP 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,498
Number of Sequences: 336
Number of extensions: 3618
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)