Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C17
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 32 0.50
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.66
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 0.87
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical pr... 31 1.2
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 3.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.5
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 3.5
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 3.5
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.5
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 3.5
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 4.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.2
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.1
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 8.1
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 8.1
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 28 8.1
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 8.1
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 540 PPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 683
P TT S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 423 PDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 470
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 190 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 303
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 7/54 (12%)
Frame = +1
Query: 775 PXXXPXTW----GPPXFXAPPTXXXXPP---XXPXXLXPPXXXXXXAPPPSXSP 915
P P W GPP F PP PP P PP PPP P
Sbjct: 37 PWGPPPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEP 90
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 281 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 102
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 101 S 99
S
Sbjct: 136 S 136
>Z19158-3|CAA79572.2| 305|Caenorhabditis elegans Hypothetical
protein T23G5.6 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 509 KPARKSPGSLPPVLENNRVYFKIMSTEDQQYLKLXNTKGSSD 634
KP +K P +PP+ N + I S E + LK SSD
Sbjct: 106 KPYQKDPEPMPPICTNGNGFLDINSQEHENNLKRGYESDSSD 147
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 281 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 102
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 101 S 99
S
Sbjct: 136 S 136
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 802 PPXFXAPPTXXXXPPXXPXXLXPPXXXXXXAPPPSXSP 915
PP PP PP P PP PPP P
Sbjct: 35 PPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 799 GPPXFXAPPTXXXXPPXXPXXLXPPXXXXXXAPPPSXSP 915
GPP PP PP P PP PPP P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCP-PPPICPPQFCPPPPMCP 63
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 555 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 683
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 552 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 689
KTT FT+ P P T ST +S T V + S+T TP T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 276 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 112
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 787 PXTWGPPXFXA-PPTXXXXPPXXPXXLXPPXXXXXXAPPP 903
P T GPP PP PP P PP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 787 PXTWGPPXFXA-PPTXXXXPPXXPXXLXPPXXXXXXAPPP 903
P T GPP PP PP P PP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +1
Query: 787 PXTWGPPXFXA-PPTXXXXPPXXPXXLXPPXXXXXXAPPP 903
P T GPP PP PP P PP PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 914 GXXEGGGAXXXXXXGGXXXXGXXGGXXXXVGGAXXXGGPQVXGXXXGAY 768
G GGG GG G GG GG GG G G Y
Sbjct: 167 GGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGY 215
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 268 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 357
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 522 SLLEVYPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 692
+L V PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 37 TLSPVSPPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 522 SLLEVYPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 692
+L V PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 37 TLSPVSPPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 522 SLLEVYPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTL 692
+L V PP ++ TSRSC P + +I + PLTPS T L
Sbjct: 37 TLSPVSPPTANSSSSTSRSCSPVVRA--ETIVAGKWTHISGKVSVRPLTPSETESVL 91
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 184 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 363
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 364 IV--KSYFPIQFRVI 402
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,168,706
Number of Sequences: 27780
Number of extensions: 367218
Number of successful extensions: 1698
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -