Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C16
         (969 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           26   0.38 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.38 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.38 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    25   0.88 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.88 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   1.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    24   1.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   4.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   8.2  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +1

Query: 790 PHPPPPXXXPXPXPXXPPPPXPXPXPAXLPPXPG 891
           P P      P P P  P  P P P  + L   PG
Sbjct: 71  PLPSDGTTSPEPDPEIPVAPEPAPLASPLVQEPG 104


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 7/52 (13%)
 Frame = +3

Query: 834 PPXTXXPLPPPXPXPPPXRAXXXPPPPXHPP-------XPPXAXPPPPPXRP 968
           PP     +P   P PPP        P  +P         PP A P P   RP
Sbjct: 202 PPTEDCDVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFNLPPGAIPVPDKNRP 253


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 906  PPPXHPPXPPXAXPPPPP 959
            P   HPP PP +  PP P
Sbjct: 1371 PTEWHPPIPPTSEKPPLP 1388


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 770 PXXXXPPXTPPPXPPPXP 823
           P    PP TP P PP  P
Sbjct: 110 PSGNVPPLTPSPGPPSHP 127


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 11/34 (32%), Positives = 12/34 (35%)
 Frame = +2

Query: 848 PPPXPXXPXSPPXPGXXXXPPXXPPPXXXSRXXP 949
           PPP P    +P        P   PPP   S   P
Sbjct: 11  PPPAPQSAATPISSSGMTSPAAAPPPATTSSGSP 44



 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 754 LXXFTPXPXXSPPHPPP 804
           L  + P P  S P+PPP
Sbjct: 200 LRNYGPEPVPSTPYPPP 216


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/50 (26%), Positives = 16/50 (32%)
 Frame = +1

Query: 799 PPPXXXPXPXPXXPPPPXPXPXPAXLPPXPGRXPXPPXPPTPPXXLXXXP 948
           P P   P      P           +PP PG  P PP   + P  +   P
Sbjct: 205 PYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/50 (26%), Positives = 16/50 (32%)
 Frame = +1

Query: 799 PPPXXXPXPXPXXPPPPXPXPXPAXLPPXPGRXPXPPXPPTPPXXLXXXP 948
           P P   P      P           +PP PG  P PP   + P  +   P
Sbjct: 97  PYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGP 146


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/38 (34%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
 Frame = +3

Query: 786 PPXPPPPXXXPXPXPXPPX-----TXXPLPPPXPXPPP 884
           P   PP    P P    P      +  P  PP P PPP
Sbjct: 68  PVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +3

Query: 795 PPPPXXXPXPXPXPPXTXXPLPPPXPXPPPXRAXXXPPPPXHPP 926
           P P    P P   P        PP P  PP      P PP  PP
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPP-----LPLPPIFPP 191



 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +2

Query: 755 CXXLPPXXXXPPXTPPPXPPP 817
           C   PP    PP   PP  PP
Sbjct: 171 CNNYPPLPQVPPLPLPPIFPP 191



 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
 Frame = +3

Query: 858 PPPXPXPPPXRAXXXPPPPXHPPXP-PXAXPP 950
           P P   P        PP P  PP P P   PP
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 793 HPPPPXXXPXPXPXXPPPPXPXP 861
           +PP P   P P P   PP    P
Sbjct: 174 YPPLPQVPPLPLPPIFPPTMINP 196


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = -2

Query: 899 GXRPGXGGXXAGXGXGXGGGGXXGXGXGXXXGGGG 795
           G  PG      G      GGG  G   G    GGG
Sbjct: 74  GVIPGVAVDFLGENNDDSGGGRGGGRDGDRGDGGG 108



 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 816 GGGXGGGVXGGXXXXGGK 763
           GGG GGG  G     GG+
Sbjct: 92  GGGRGGGRDGDRGDGGGE 109


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 861 PPXPXPPPXRAXXXPPPPXHP 923
           PP P P P +     P P  P
Sbjct: 250 PPTPKPRPTKVSRRKPRPPRP 270



 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 844 PPXPXPXPAXLPPXPGRXPXPPXP 915
           PP P P P  +     R P PP P
Sbjct: 250 PPTPKPRPTKV---SRRKPRPPRP 270


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/42 (26%), Positives = 12/42 (28%)
 Frame = +3

Query: 801 PPXXXPXPXPXPPXTXXPLPPPXPXPPPXRAXXXPPPPXHPP 926
           PP   P P P P  T    P      P   +    P     P
Sbjct: 392 PPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTP 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,591
Number of Sequences: 336
Number of extensions: 6041
Number of successful extensions: 51
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27409745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)