Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C15
         (949 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.83 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   1.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 0.83
 Identities = 27/107 (25%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
 Frame = +3

Query: 507 PQNXGIXPEKTXDQKAXXRPGTRTKARVAGVFP*XPP-PCXTIPKIDPPLK-------GG 662
           P N G     T  Q    RPG           P  P  P   +P + P ++       G 
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGM 254

Query: 663 XXPPXLSXSPPXSPPXXXPRCRPSXXP----TPGPLXRAHLSAPXPP 791
             PP +   PP  PP      RP   P      G +    +  P PP
Sbjct: 255 QRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPP 301


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +3

Query: 615 PPCXTIPKID-PPLKGGXXPPXLSXSPPXSPP 707
           PP   +P +  PP+  G  PP +S +PP   P
Sbjct: 118 PPPMMVPTMGMPPMGLGMRPPVMSAAPPQLNP 149


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 15/43 (34%), Positives = 15/43 (34%)
 Frame = -1

Query: 730 GRQRGXXXGGEXGGDXDRXGGXXPPLRGGSIFGMVXQGGGXXG 602
           G   G   GG  GG     G     L GG   G    GGG  G
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIG 693


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 656 FEGRVDFWDG 627
           F GR++FWDG
Sbjct: 401 FTGRIEFWDG 410


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,567
Number of Sequences: 2352
Number of extensions: 7801
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)