Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C14
         (966 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    24   1.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    24   1.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   2.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   8.2  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 103 NQRYQRLFN*GEEERRQIGQNKEEP 177
           NQ Y ++F   E+   QI ++++EP
Sbjct: 96  NQNYSKVFGNDEKALEQIAKSEKEP 120


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 103 NQRYQRLFN*GEEERRQIGQNKEEP 177
           NQ Y ++F   E+   QI ++++EP
Sbjct: 156 NQNYSKVFGNDEKALEQIAKSEKEP 180


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 103 NQRYQRLFN*GEEERRQIGQNKEEP 177
           NQ Y ++F   E+   QI ++++EP
Sbjct: 156 NQNYSKVFGNDEKALEQIAKSEKEP 180


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +3

Query: 567 VPGEVWEXXXXSMNXPTTPXSPGASXXGXXSXSXLXTPRP 686
           +P   W     ++  PT P  P A      S S L +P P
Sbjct: 194 LPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALESPNP 233


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +3

Query: 567 VPGEVWEXXXXSMNXPTTPXSPGASXXGXXSXSXLXTPRP 686
           +P   W     ++  PT P  P A      S S L +P P
Sbjct: 194 LPTYKWMQVKRNVPKPTVPKIPPAEFPTTSSSSALESPDP 233


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 482 NFTNKAFFSLH 450
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 482 NFTNKAFFSLH 450
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = +1

Query: 733 PHRXXXPPXSPXPXXGPPXP 792
           PH    PP    P  G P P
Sbjct: 62  PHHYGGPPSGGQPPQGMPYP 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,304
Number of Sequences: 336
Number of extensions: 2666
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27306312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)