Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C14
(966 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.02 |rpl3801|rpl38-1|60S ribosomal protein L38|Schizosacc... 96 6e-21
SPAC30D11.12 |rpl3802|rpl38-2, rps38|60S ribosomal protein L38|S... 90 5e-19
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.046
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.11
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 31 0.18
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.32
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.98
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.3
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.7
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 27 5.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.9
>SPBC577.02 |rpl3801|rpl38-1|60S ribosomal protein
L38|Schizosaccharomyces pombe|chr 2|||Manual
Length = 74
Score = 96.3 bits (229), Expect = 6e-21
Identities = 47/70 (67%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 MPREIKDIKDFLIKARRKDAKSVKIKKNP-ENVKFKVRCSRFLYTLVITDKEKAEKLKQS 268
MPR+I DIK FL ARRKDA S +IKKN ++VKFK+RCS++LYTLV+ D +KAEKL+QS
Sbjct: 1 MPRQISDIKQFLEIARRKDATSARIKKNTNKDVKFKLRCSKYLYTLVVADAKKAEKLRQS 60
Query: 269 LPPGLQVKEV 298
LPP L V EV
Sbjct: 61 LPPDLTVTEV 70
>SPAC30D11.12 |rpl3802|rpl38-2, rps38|60S ribosomal protein
L38|Schizosaccharomyces pombe|chr 1|||Manual
Length = 74
Score = 89.8 bits (213), Expect = 5e-19
Identities = 44/70 (62%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 MPREIKDIKDFLIKARRKDAKSVKIKKNPEN-VKFKVRCSRFLYTLVITDKEKAEKLKQS 268
MPR++ DIK FL A R DA S ++KKN VKFK+RCSR+LYTLV+ D +KAEKL+QS
Sbjct: 1 MPRQVTDIKLFLQLAHRGDATSARVKKNQNKAVKFKLRCSRYLYTLVVADAKKAEKLRQS 60
Query: 269 LPPGLQVKEV 298
LPP L V EV
Sbjct: 61 LPPALTVTEV 70
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.5 bits (73), Expect = 0.046
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = -1
Query: 816 GXXXXXGGGXGGPXXGXXGXGGXRXPVGXG*LEGRYGXAXXGXEGGESG 670
G GGG GGP G G GG G G G +G G G E G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.11
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +1
Query: 727 SVPHRXXXPPXSPXPXXGPPXPPTXSLXPPX-GXXPXPAXTTPPRXRXXXGPXXPXXXPP 903
S P R PP P P PP P S PP P PA P P P PP
Sbjct: 142 SAPPRPSIPP--PSPASAPPIP---SKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 904 PP 909
P
Sbjct: 197 MP 198
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +2
Query: 152 KSVKIKKN-PENVKFKVRCSRFLYTLVITDKEKAEK--LKQSLPPGLQVKEVK 301
KS+ + +N P+ K K + T+VITD+E ++ +KQ +P +Q EVK
Sbjct: 200 KSINVVRNRPDIEKLKEQLKSLGATIVITDEELMDRKTMKQKVPEWIQGGEVK 252
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.32
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 751 PPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXPXXXPPPP 909
PP P P P + PP P PP GP P PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPP 783
Score = 29.1 bits (62), Expect = 0.98
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 781 PPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXPXXXPPPP 909
PP PP + P P P PP GP P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIP---VPPPAPIMGGPPPP---PPPP 768
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 733 PHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPP 855
P P +P P PP P PP P A PP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.98
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +1
Query: 730 VPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXPXXXPPP 906
VP P P P P P S PP P P T P P P P P
Sbjct: 1014 VPKLSSKAPPVPLPSADAPPIPVPSTAPP---VPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 3/64 (4%)
Frame = +1
Query: 727 SVPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXP---XXX 897
S+P PP P P PP P PP P P+ PP P P
Sbjct: 1075 SIPAPSGAPPV-PAPSGIPPVPKPSVAAPP---VPKPSVAVPPVPAPSGAPPVPKPSVAA 1130
Query: 898 PPPP 909
PP P
Sbjct: 1131 PPVP 1134
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/63 (31%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +1
Query: 730 VPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXP---XXXP 900
VP PP PP P S PP P PA PP P P P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPP---VPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Query: 901 PPP 909
P P
Sbjct: 1209 PVP 1211
Score = 26.6 bits (56), Expect = 5.2
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +1
Query: 730 VPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXPXXXPPPP 909
VP P P P G P P S PP PP P PP P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.2 bits (55), Expect = 6.9
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +1
Query: 730 VPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXP---XXXP 900
VP PP P P P P S PP P P+ PP P P P
Sbjct: 1114 VPAPSGAPPV-PKPSVAAPPVPVPSGAPP---VPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 901 PPP 909
P P
Sbjct: 1170 PVP 1172
Score = 25.8 bits (54), Expect = 9.1
Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +1
Query: 730 VPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXG-PXXPXXXPPP 906
VP P P P PP P + P P P+ PP + P P P
Sbjct: 1066 VPAPSSEIPSIPAPSGAPPVPAPSGIPP----VPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Query: 907 P 909
P
Sbjct: 1122 P 1122
Score = 25.8 bits (54), Expect = 9.1
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Frame = +1
Query: 730 VPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPPRXRXXXGPXXP---XXXP 900
VP P P P P P S PP P P+ PP P P P
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPP---VPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 901 PPP 909
P P
Sbjct: 1151 PVP 1153
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 730 VPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPP 855
VP P P P PP P + PP P P PP
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPP---VPVPTAKAPP 1238
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Frame = +1
Query: 769 PXXGPPXPPTXSLXPPXGXX--PXPAXTTPPRXRXXXGPXXPXXXPPPP 909
P PP P + P P P + PP P P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 712 SPLKLSVPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTP 852
+P ++S P P P P PP P PP P PA + P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP---PPLPASSAP 1741
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +1
Query: 721 KLSVPHRXXXP-PXSPXPXXGPPXP--PTXSLXPPXGXXP--XPAXTTPP 855
K++VP P P SP P PP P P S P P P + PP
Sbjct: 291 KMNVPPMGMYPLPFSPLPSAAPPIPFSPNVSSHPHMAFLPATVPTHSAPP 340
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 709 VSPLKLSVPHRXXXPPXSPXPXXGPPXPPTXS 804
VSP++ H P SP P PP P+ S
Sbjct: 196 VSPIQNVAQHVSTLPKISPIPPSNPPPVPSVS 227
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 6.9
Identities = 13/46 (28%), Positives = 15/46 (32%)
Frame = +1
Query: 718 LKLSVPHRXXXPPXSPXPXXGPPXPPTXSLXPPXGXXPXPAXTTPP 855
L + P PP +P P P PP P PA P
Sbjct: 439 LPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,561,485
Number of Sequences: 5004
Number of extensions: 40788
Number of successful extensions: 185
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 495302128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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