Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C13
(947 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 45 8e-05
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 40 0.004
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 38 0.012
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 36 0.063
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 36 0.063
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.15
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 34 0.15
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 33 0.34
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 33 0.45
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 33 0.45
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 31 1.4
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 31 1.8
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 31 1.8
SB_30592| Best HMM Match : MAM (HMM E-Value=2.66247e-44) 31 1.8
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 31 1.8
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 2.4
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 30 2.4
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 30 3.1
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 30 3.1
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 3.1
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 5.5
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.3
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 7.3
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 48.0 bits (109), Expect = 1e-05
Identities = 33/119 (27%), Positives = 33/119 (27%), Gaps = 3/119 (2%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PPP PP PP P P P P
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPP 151
Query: 726 XXFXXAPPXXXPXPNPXXTT---PPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P PNP PP P PP PP P P A PP PP
Sbjct: 152 PNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPP 210
Score = 41.5 bits (93), Expect = 0.001
Identities = 31/118 (26%), Positives = 33/118 (27%), Gaps = 2/118 (1%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PPP PP PP P P P + P
Sbjct: 100 PPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPP--PPNAPYPPSPNAPYPPPPNPPYP 157
Query: 726 XXFXXAPPXXXPX--PNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P PP P PP PP P P +PP PP
Sbjct: 158 PPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPP-PNPPYPPP 214
Score = 38.3 bits (85), Expect = 0.009
Identities = 31/116 (26%), Positives = 33/116 (28%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PP PP PPP P P P P + P
Sbjct: 127 PPNPPYPPPPNAPYPPSPNA-PYPPPPNPPYPPPLY--PPPPNPPPPNAPYPPPPYPPPP 183
Query: 726 XXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P PP P PP P P P A +PP PP
Sbjct: 184 NPPYPPPPNPPYPPPPNAPNPPP--PNPPYPPPPNAPNPPYPPPPNA-PNPPYPPP 236
Score = 32.7 bits (71), Expect = 0.45
Identities = 28/117 (23%), Positives = 30/117 (25%), Gaps = 3/117 (2%)
Frame = +1
Query: 553 PPPPXXPGXXGTPPXXEGXXXLPPLXPXPXDXXWXXPXPXXXX---GKKXXSXXEPXGHX 723
PP P P PP PP P P P P P
Sbjct: 97 PPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPY 156
Query: 724 XXPLXXPPLXXXRXXTXXQPPPXXXFPSXXFPRXXRXPXLXXGLXXXP*XTPPPXPP 894
PL PP PPP P+ +P P P PP PP
Sbjct: 157 PPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPP 213
Score = 32.3 bits (70), Expect = 0.59
Identities = 26/114 (22%), Positives = 28/114 (24%)
Frame = +1
Query: 553 PPPPXXPGXXGTPPXXEGXXXLPPLXPXPXDXXWXXPXPXXXXGKKXXSXXEPXGHXXXP 732
PPP P PP PP P P P + P P
Sbjct: 105 PPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPP 164
Query: 733 LXXPPLXXXRXXTXXQPPPXXXFPSXXFPRXXRXPXLXXGLXXXP*XTPPPXPP 894
PP PPP +P P P P PPP P
Sbjct: 165 PNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAP 218
Score = 28.7 bits (61), Expect = 7.3
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = +3
Query: 732 FXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
F PP P P P PP P PP PP P P +PP PP
Sbjct: 88 FSPNPP-YPPPPYPPYPPPPPYPP----PPNPPYPPPPNAPYPPP-PNPPYPPP 135
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 45.2 bits (102), Expect = 8e-05
Identities = 34/120 (28%), Positives = 37/120 (30%), Gaps = 5/120 (4%)
Frame = +3
Query: 555 PPPXXXXXXXXPPXXRGVXXAPP-----PXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGP 719
PPP PP RG PP P P P P + P
Sbjct: 287 PPPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAP 346
Query: 720 XSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXG 899
APP P PP P PP PP P G P +L +PP PP G
Sbjct: 347 PPPSMGMAPPPVGGAAPPPPPPPPVGGP----PPPPP---PIEGRPPSSLGNPPPPPPPG 399
Score = 32.7 bits (71), Expect = 0.45
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 554 PPPXXXXGPXXPPLXXR--GXXGSPPXPPXPXMXFGXPXPL 670
PPP P PP+ R G+PP PP P P P+
Sbjct: 368 PPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPGPM 408
Score = 32.3 bits (70), Expect = 0.59
Identities = 27/102 (26%), Positives = 27/102 (26%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PP PP R PPP G P P P
Sbjct: 315 PPPPPARMGTAPPPPPPSRSSQRPPPP-------SRGAPPPPSMGMAPPPVGGAAPPPPP 367
Query: 726 XXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAG 851
PP P P P PP L PP P P G
Sbjct: 368 PPPVGGPP---PPPPPIEGRPPSSLGNPPPPPPPGRGAPPPG 406
Score = 31.9 bits (69), Expect = 0.78
Identities = 27/101 (26%), Positives = 30/101 (29%)
Frame = +3
Query: 549 PXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSX 728
P PPP PP RG PPP +G P P + GP
Sbjct: 326 PPPPPPSRSSQRPPPPSRGAP--PPPSMGMAPPPVGGAAPPPPPPPPVG------GPPPP 377
Query: 729 XFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAG 851
PP P+ PP P PP P AG
Sbjct: 378 P----PPIEGRPPSSLGNPPPPPPPGRGAPPPGPMIPGRAG 414
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 39.5 bits (88), Expect = 0.004
Identities = 30/119 (25%), Positives = 31/119 (26%), Gaps = 3/119 (2%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
P PPP PP PP P G P P P P
Sbjct: 479 PRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPPGAPHPRVPPPGA---PHPRVPPPG 535
Query: 726 XXFXXAPPXXXPXPN---PXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P + P P P PP P P HP PP
Sbjct: 536 APHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPPGTPHPRVPPP 594
Score = 39.1 bits (87), Expect = 0.005
Identities = 30/119 (25%), Positives = 30/119 (25%), Gaps = 3/119 (2%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
P PPP PP PP P G P P P P
Sbjct: 399 PRVPPPGAPHPRVPPPGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGA---PHPRVPPPG 455
Query: 726 XXFXXAPPXXXPXPN---PXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P P P P PP P P HP PP
Sbjct: 456 APHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQRVPPPGAPHPRVPPP 514
Score = 36.3 bits (80), Expect = 0.036
Identities = 29/113 (25%), Positives = 30/113 (26%)
Frame = +3
Query: 555 PPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSXXF 734
PPP PP PP P G P P P G P
Sbjct: 502 PPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPP-------GAPHPRVPPP 554
Query: 735 XXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
+ P P P PP P P PP P P HP PP
Sbjct: 555 GASHPRVPPPGAPHPRVPPPGAPH---PRVPPPGTPHPRVPPPGAPHPKVPPP 604
Score = 36.3 bits (80), Expect = 0.036
Identities = 30/119 (25%), Positives = 31/119 (26%), Gaps = 3/119 (2%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
P PPP PP PP P G P P P P
Sbjct: 509 PRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGA---SHPRVPPPG 565
Query: 726 XXFXXAPPXXXPXPN-PXXTTPPXXLPXXXLP--PXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P TP +P P PP P HP PP
Sbjct: 566 APHPRVPPPGAPHPRVPPPGTPHPRVPPPGAPHPKVPPPGAPYQRLPYSGAYHPRLPPP 624
Score = 28.3 bits (60), Expect = 9.6
Identities = 28/116 (24%), Positives = 28/116 (24%), Gaps = 3/116 (2%)
Frame = +3
Query: 555 PPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSXXF 734
PPP PP PP G P P G
Sbjct: 362 PPPDGPYTRALPPGEPYARMPPPGATHPRVPSPGASHPRVPPPGAPHPRVPPPGASHQRV 421
Query: 735 XX--APPXXXPXPN-PXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
AP P P P PP P P PP P P HP PP
Sbjct: 422 RPPGAPHPRVPPPGAPHPRFPPPGAPH---PRVPPPGAPHPRVPPPGAPHPRVPPP 474
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 39.5 bits (88), Expect = 0.004
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
+PP P P P + PP P PP PP P P PP PP
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
+PP P P P PP P PP PP P P PP PP
Sbjct: 377 SPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXGXR 905
PP P P P PP P PP PP P P PP PP R
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALR 435
Score = 35.9 bits (79), Expect = 0.048
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P+P PP P PP PP P P PP PP
Sbjct: 369 PPPPPPPPSPPPPPPPPP-PSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 35.1 bits (77), Expect = 0.084
Identities = 23/82 (28%), Positives = 25/82 (30%)
Frame = +3
Query: 603 GVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSXXFXXAPPXXXPXPNPXXT 782
G+ +PPP P P P P P PP P P P
Sbjct: 360 GINMSPPPPPPPPPPPPSPPPPPPPPPPS--------PPPPPQPPPPPPPPPPPPPPPPP 411
Query: 783 TPPXXLPXXXLPPXPPXAGPXA 848
PP P PP PP P A
Sbjct: 412 PPPPPPPAPPPPPPPPPPPPPA 433
Score = 35.1 bits (77), Expect = 0.084
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P PP P PP PP P P PP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P P P PP PP P P PP PP
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 33.9 bits (74), Expect = 0.19
Identities = 27/92 (29%), Positives = 28/92 (30%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PPP PP +PPP PQ P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPP-----------PPP 413
Query: 726 XXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPP 821
APP P P P PP L PP
Sbjct: 414 PPPPPAPPPPPPPPPP----PPPALRLACAPP 441
Score = 33.9 bits (74), Expect = 0.19
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +3
Query: 744 PPXXXP--XPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P + PP P PP PP P P PP PP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +3
Query: 519 PKKXXXXXXPPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXP 668
P + PP PPP PP PPP P L P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +3
Query: 705 GTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXA--LXHP 878
GT P S PP P P P + PP P PP PP P + P A L P
Sbjct: 191 GTSHPTSPSQITQPPP--PPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEP 248
Query: 879 PXXP 890
P P
Sbjct: 249 PPIP 252
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXH-PPXXPP 893
PP P P P +PP P PP PP P + + PP PP
Sbjct: 212 PPSPPPPPPPPSPSPPR--PPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPP 260
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 35.5 bits (78), Expect = 0.063
Identities = 32/120 (26%), Positives = 34/120 (28%), Gaps = 5/120 (4%)
Frame = +3
Query: 546 PPXPP----PXXXXXXXXPPXXRGVXXAP-PPXPQXXXXXLGXPXPXXXPXXKIXFXXGT 710
PP PP P P +G P PP P G P P + G
Sbjct: 41 PPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGPPG-LPGPNGV 99
Query: 711 XGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXP 890
GP PP P P P LP P PP G P PP P
Sbjct: 100 NGPPGELGDMGPPGPPGPPGPQMPPGPPGLPGPPGPAGPPGTNGELG--PPGDVGPPGNP 157
Score = 28.3 bits (60), Expect = 9.6
Identities = 29/113 (25%), Positives = 30/113 (26%), Gaps = 6/113 (5%)
Frame = +3
Query: 588 PPXXRGVXXAP-PPXPQXXXXXLGXPXPXXXPXXK-----IXFXXGTXGPXSXXFXXAPP 749
PP G+ AP P P LG P P GP PP
Sbjct: 293 PPGPPGLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPP 352
Query: 750 XXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXGXRG 908
P P P LP P PP P P P P G G
Sbjct: 353 GINGPPGPLGDVGPPGLPGPPGPQMPP-GPPGLPGAPGPKGPPGTNGPLGPPG 404
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 35.5 bits (78), Expect = 0.063
Identities = 33/128 (25%), Positives = 36/128 (28%), Gaps = 12/128 (9%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIX--------FX 701
PP P P + V PPP P+ P P P
Sbjct: 86 PPLVPAGVEAPTPTPMVAQSVAPTPPPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIA 145
Query: 702 XGTXGPXSXXFXXAPPXXXPXPNPXX----TTPPXXLPXXXLPPXPPXAGPXAGXXPXAL 869
T GP AP P P P T P +P P PP GP P
Sbjct: 146 PATGGPPPPP-PIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPP- 203
Query: 870 XHPPXXPP 893
PP PP
Sbjct: 204 --PPPPPP 209
Score = 35.1 bits (77), Expect = 0.084
Identities = 26/104 (25%), Positives = 28/104 (26%)
Frame = +3
Query: 519 PKKXXXXXXPPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXF 698
P+ PP PP PP PP P G P P P
Sbjct: 117 PETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGP-PPPPPIAPAAT 175
Query: 699 XXGTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPP 830
P + PP P P P PP P L PP
Sbjct: 176 VPAPAVPLAAA-SPPPPSGGPPPPPPPPPPPPPPPILELAAPPP 218
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXL-PXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXG 899
PP P+ + PP P PP PP P G P PP P G
Sbjct: 113 PPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPP---PPIAPATG 162
Score = 30.3 bits (65), Expect = 2.4
Identities = 31/121 (25%), Positives = 31/121 (25%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
P P PP APPP P G P P T GP
Sbjct: 114 PRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPP-------IAPATGGPPP 166
Query: 726 XXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXGXR 905
AP P P P PP PP P L PP PP
Sbjct: 167 PP-PIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPPILELAAPP--PPGSVL 223
Query: 906 G 908
G
Sbjct: 224 G 224
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 34.3 bits (75), Expect = 0.15
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +3
Query: 732 FXXAPPXXXPXPNPXXTTPPXXL--PXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXGXR 905
F APP P P L P PP PP + P G P + PP PP G
Sbjct: 211 FADAPPIQTSTSLPPMIPPVGMLGHPPMGAPP-PPHSMPPPGMPPPGMMPPPGFPPMGMP 269
Query: 906 G 908
G
Sbjct: 270 G 270
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 554 PPPXXXXGPXXPPLXXRGXXGSPPXPPXPXMXFGXPXP 667
PPP P PP+ G G PP P M G P
Sbjct: 253 PPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPPGGMPP 290
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 34.3 bits (75), Expect = 0.15
Identities = 33/118 (27%), Positives = 41/118 (34%), Gaps = 2/118 (1%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PPP P A PP P G P P P + F + P +
Sbjct: 458 PPAPPPSVFAPSSGVP----TPVAAPP-PSVFAPSSGVPTPVAAPPPSV-FAPSSGVPTT 511
Query: 726 XXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXA--GPXAGXXPXALXHPPXXPP 893
APP P P+ + P PP PP + P +G P + PP PP
Sbjct: 512 VT---APPAAPP-PSVFAPSSGVPTPVTEPPPAPPPSVFAPSSGV-PTPVTAPPPAPP 564
Score = 32.7 bits (71), Expect = 0.45
Identities = 30/112 (26%), Positives = 34/112 (30%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PPP P A PP P G P P P + F + P
Sbjct: 400 PPAPPPSVFAPSSGVP----TPVAAPP-PSVFAPSSGVPTPVAAPPPSV-FASSSGVPTP 453
Query: 726 XXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPP 881
APP P P P P +P P P P +G PP
Sbjct: 454 VT---APP---PAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTPVAAPPP 499
Score = 30.3 bits (65), Expect = 2.4
Identities = 29/109 (26%), Positives = 33/109 (30%)
Frame = +3
Query: 555 PPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSXXF 734
PPP PP APPP G P P P + F + P
Sbjct: 346 PPPAVPTPATAPPPV----VAPPP--SVFASSSGVPTPVKAPPPSV-FASSSGVPTPVA- 397
Query: 735 XXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPP 881
APP P P P P +P P P P +G PP
Sbjct: 398 --APP---PAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGVPTPVAAPPP 441
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +3
Query: 744 PPXXXPX--PNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P P TPP P PP PP P PP PP
Sbjct: 349 PPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPP 400
Score = 31.9 bits (69), Expect = 0.78
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
P P P P PP P PP PP P PP PP
Sbjct: 360 PTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +3
Query: 705 GTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPX 884
GT G P P P P P P PP PP P PP
Sbjct: 337 GTSGGGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPP 396
Query: 885 XPP 893
PP
Sbjct: 397 PPP 399
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXG 899
PP P P PP P PP PP GP P PP P G
Sbjct: 365 PPPPPPTNKPPPPPPPTNGPP---PPPPPTNGPPPPPPPTNGPPPPPPPTNG 413
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 533 PXXXXXXPPPXXXXGPXXPPLXXRGXXGSPPXPPXPXMXFGXPXP 667
P PPP GP PP G PP PP P G P P
Sbjct: 369 PPTNKPPPPPPPTNGPPPPPPPTNG----PPPPPPPTN--GPPPP 407
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPP 626
PP PPP PP G PPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPPPP 400
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 533 PXXXXXXPPPXXXXGPXXPPLXXRGXXGSPPXPPXP 640
P PPP GP PP G PP PP P
Sbjct: 379 PPTNGPPPPPPPTNGPPPPPPPTNG----PPPPPPP 410
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPP 626
PP PPP PP G PPP
Sbjct: 384 PPPPPPPTNGPPPPPPPTNGPPPPPPP 410
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXX---LPPXPPXAGPXAGXXPXALXHPPXXPPXG 899
PP P P PP +P LPP P P P A PP PP G
Sbjct: 2595 PPFFGPQLPPPDMFPPQMMPPMVPMMLPPMLPLPPPGLPMQPEAPVQPPPLPPPG 2649
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 32.7 bits (71), Expect = 0.45
Identities = 25/98 (25%), Positives = 26/98 (26%)
Frame = +3
Query: 549 PXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSX 728
P PPP PP R PPP + P P G P
Sbjct: 194 PPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPP- 252
Query: 729 XFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGP 842
P P P PP PP PP GP
Sbjct: 253 --PMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGP 288
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXP 632
PP PPP PP RG APPP P
Sbjct: 318 PPPPPPSRDQVPLPPPPLRG-QIAPPPPP 345
Score = 30.7 bits (66), Expect = 1.8
Identities = 31/128 (24%), Positives = 33/128 (25%), Gaps = 3/128 (2%)
Frame = +3
Query: 519 PKKXXXXXXPPXP---PPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXK 689
P K PP P PP PP AP P P P
Sbjct: 272 PPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLP 331
Query: 690 IXFXXGTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXAL 869
G P P P P P P PP PP P +G
Sbjct: 332 PPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQ--PLGGPPPPPPGRRPPSGKI---- 385
Query: 870 XHPPXXPP 893
+PP PP
Sbjct: 386 -NPPPPPP 392
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 32.7 bits (71), Expect = 0.45
Identities = 25/98 (25%), Positives = 26/98 (26%)
Frame = +3
Query: 549 PXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSX 728
P PPP PP R PPP + P P G P
Sbjct: 106 PPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPP- 164
Query: 729 XFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGP 842
P P P PP PP PP GP
Sbjct: 165 --PMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGP 200
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXP 632
PP PPP PP RG APPP P
Sbjct: 230 PPPPPPSRDQVPLPPPPLRG-QIAPPPPP 257
Score = 30.7 bits (66), Expect = 1.8
Identities = 31/128 (24%), Positives = 33/128 (25%), Gaps = 3/128 (2%)
Frame = +3
Query: 519 PKKXXXXXXPPXP---PPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXK 689
P K PP P PP PP AP P P P
Sbjct: 184 PPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLP 243
Query: 690 IXFXXGTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXAL 869
G P P P P P P PP PP P +G
Sbjct: 244 PPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQ--PLGGPPPPPPGRRPPSGKI---- 297
Query: 870 XHPPXXPP 893
+PP PP
Sbjct: 298 -NPPPPPP 304
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 32.3 bits (70), Expect = 0.59
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXP 890
PP P P PP P P PP A P A P L PP P
Sbjct: 53 PPPSPPAAAPAAPPPPAAAPAA---PPPPAAPPAAPPPPPPLPAPPPPP 98
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 732 FXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
F P P P +PP P P PP A P A P A P PP
Sbjct: 39 FTYYPHFISSSPPPPPPSPPAAAP---AAPPPPAAAPAAPPPPAAPPAAPPPPP 89
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
AP P PP P PP PP P A PP PP
Sbjct: 61 APAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPA-PQPPPAPP 110
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.59
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLP-PXPPXAGPXAGXXPXALXHPPXXPP 893
APP P P P PP P P P A P P PP PP
Sbjct: 763 APPQFAPVPPPCAPIPPMPCSAPLPPAPAPFSAAPHLPPAPNISAEPPPPPP 814
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 31.5 bits (68), Expect = 1.0
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
PP PPP PP G PPP P G P P P P
Sbjct: 694 PPPPPPPP------PPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPP 747
Query: 726 XXFXXAPPXXXPXPNP 773
PP P P
Sbjct: 748 PGCAGLPPPPPPIDVP 763
Score = 31.5 bits (68), Expect = 1.0
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 554 PPPXXXXGPXXPPLXXRGXXGSPPXPPXPXM-XFGXPXP 667
PPP P PP G G PP PP P G P P
Sbjct: 718 PPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPPP 756
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXX-LPPXPPXAGPXAGXXPXALXHPPXXPPXGXRG 908
PP P PP P LPP PP P P PP PP G G
Sbjct: 701 PPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPP----PPPPPPPGCAG 752
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 31.5 bits (68), Expect = 1.0
Identities = 29/121 (23%), Positives = 32/121 (26%)
Frame = +3
Query: 516 VPKKXXXXXXPPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIX 695
V K PP P PP + PPP P P +
Sbjct: 884 VTKNPKTTTAPPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPP------PPPIQTTRPTVP 937
Query: 696 FXXGTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXH 875
T + P P P P PP LP PP PP A P A
Sbjct: 938 TTPTTQASTTRPTPPPPTSALPPPIPATQVPPPPLPPLP-PPPPPVQTTTAPTLPPASCM 996
Query: 876 P 878
P
Sbjct: 997 P 997
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
APP P P P + PP P PP PP G G P PP PP
Sbjct: 952 APP---PPPPPGGSAPP---PGGGAPPLPPPPG---GSAPPPPPPPPPPPP 993
Score = 29.5 bits (63), Expect = 4.2
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGP-X 722
PP PPP PP G + PP P P P P G P
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPPGG-----NAPPPPPPPGGSAPPPGGGAPPLP 974
Query: 723 SXXFXXAPPXXXPXPNP 773
APP P P P
Sbjct: 975 PPPGGSAPPPPPPPPPP 991
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 747 PXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXG 899
P P PP LPP PP + P PP PP G
Sbjct: 910 PSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPG 960
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 31.1 bits (67), Expect = 1.4
Identities = 25/109 (22%), Positives = 30/109 (27%), Gaps = 1/109 (0%)
Frame = +3
Query: 513 FVPKKXXXXXXPPXPPPXXXXXXXXPPXXRGVXXAP-PPXPQXXXXXLGXPXPXXXPXXK 689
F+P PP PP P PP P P P P
Sbjct: 260 FIPPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHIPPAPP 319
Query: 690 IXFXXGTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXA 836
+ P + APP P P + P P +PP P A
Sbjct: 320 NPYIP--TAPPNPSIPPAPPNPSIPPAPPNPSIPPAPPNLFIPPATPNA 366
Score = 30.7 bits (66), Expect = 1.8
Identities = 30/120 (25%), Positives = 34/120 (28%), Gaps = 16/120 (13%)
Frame = +3
Query: 519 PKKXXXXXXPPXP----PPXXXXXXXXPPXXR-GVXXAPP----PXPQXXXXXLGXPXPX 671
P K PP P PP P + APP P P L P P
Sbjct: 236 PSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPY 295
Query: 672 XXPXXKIXFXXGTX-------GPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPP 830
P F P + APP P P + P P +PP PP
Sbjct: 296 IPPAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPSIPPAPPNPSIPPAPP 355
Score = 30.3 bits (65), Expect = 2.4
Identities = 27/101 (26%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Frame = +3
Query: 588 PPXXRGVXXAP-PPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXG-PXSXXFXXAPPXXXP 761
PP + P PP P P P P + G+ P + PP P
Sbjct: 179 PPAPSTIPTPPTPPAPPSPPIPTAPPTP---PMPETPLPPGSPHIPPAPLHPHIPPAP-P 234
Query: 762 XPNPXXTTPPXXLPXXXLPPXPPXAG-PXAGXXPXALXHPP 881
P+ TP +P LPP P P A P PP
Sbjct: 235 NPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPP 275
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPP--XPPXAGPXAG 851
PP P P P T PP P +PP PP A P G
Sbjct: 132 PPPVTPPPGPE-TPPPPDTPAPPVPPTEAPPTAPPTGG 168
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 759 PXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXG 899
P P P T PP + P PP A P PP PP G
Sbjct: 122 PPPPPTGTLPPPPVTPPPGPETPPPPDTPAPPVPPT-EAPPTAPPTG 167
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Frame = +3
Query: 747 PXXXPXPNPXXTTPP-----XXLPXXXLP-PXPPXAGPXAGXXPXALXHPP 881
P P P P +TPP LP LP P P P A P HPP
Sbjct: 634 PPLPPTPPPRQSTPPPLLLIPLLPLLTLPLPPPTVRHPQATPLPRLATHPP 684
>SB_30592| Best HMM Match : MAM (HMM E-Value=2.66247e-44)
Length = 667
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPP 830
A P P P P T PP LP PP P
Sbjct: 428 ATPPPTPPPTPPPTPPPTTLPPTTQPPPQP 457
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 30.7 bits (66), Expect = 1.8
Identities = 28/115 (24%), Positives = 31/115 (26%)
Frame = +3
Query: 549 PXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSX 728
P PP PP + APPP P I P +
Sbjct: 10 PGDPPPNTAIPGDPPPNTTIPRAPPPNTAIPGDRPPNTPIPGDPPPNIPIPGNP--PPNT 67
Query: 729 XFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P PP P +P PP P G P P PP
Sbjct: 68 PIPGDPPPNTPIPGD----PPPNTP---IPGNPPPNTPIPGDPPPNTPIPGDPPP 115
Score = 29.1 bits (62), Expect = 5.5
Identities = 27/105 (25%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXS 725
P PPP PP PP P P P P P +
Sbjct: 20 PGDPPPNTTIPRAPPPNTAIPGDRPPNTPIPGDPPPNIPIPGNPPPNT---PIPGDPPPN 76
Query: 726 XXFXXAPPXXXPXP-NPXXTT--PPXXLPXXXLPPXPPXAGPXAG 851
PP P P NP T P P +P PP P G
Sbjct: 77 TPIPGDPPPNTPIPGNPPPNTPIPGDPPPNTPIPGDPPPNTPIQG 121
>SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2)
Length = 352
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 768 NPXXTTPPXXLPXXXLPPX-PPXAGPXAGXXPXALXHPPXXPP 893
+P PP P PP PP P P AL PP PP
Sbjct: 173 SPGILAPPPAPPGVLAPPPAPPGVLPPPPAPPGALIPPPPAPP 215
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPP 830
PP P P P PP P PP PP
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPP 830
PP P P P PP P PP PP
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGP 842
APP P P P PP P PP PP P
Sbjct: 463 APPPPPPPPPPPPPPPPP--PPPPPPPFPPPPPP 494
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHP 878
A P P P+ TPP P PP PP A P P + P
Sbjct: 210 ATPVNPPEPDYLEPTPPP--PAAPAPPPPPAAAPPPPPPPPPVKKP 253
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +3
Query: 741 APPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
APP P PN +PP PP PP P + PP PP
Sbjct: 296 APPPAPPLPNFTSPSPPPP------PPLPPAMPAMDDLLPPEVLSPPPPPP 340
Score = 28.7 bits (61), Expect = 7.3
Identities = 23/103 (22%), Positives = 28/103 (27%), Gaps = 1/103 (0%)
Frame = +3
Query: 546 PPXPPPXXXXXXXX-PPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPX 722
P PPP PP +PPP P P ++ P
Sbjct: 286 PMTPPPAVVTAPPPAPPLPNFTSPSPPPPPPLPP---AMPAMDDLLPPEVLSPPPPPPPS 342
Query: 723 SXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAG 851
+ P P P LP +PP PP G G
Sbjct: 343 EDFYSMPSSLPMPSPPEDLYDAPATLPSPIMPPPPPMDGVDGG 385
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPP 626
PP PPP PP RG PPP
Sbjct: 195 PPPPPPGPGGIPPPPPPIRGGVPPPPP 221
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 530 TPXXXXXXPPPXXXXGPXXPPLXXRGXXGSPPXPP 634
TP PPP G PP RG G PP PP
Sbjct: 189 TPWTSVPPPPPPGPGGIPPPPPPIRG--GVPPPPP 221
Score = 29.1 bits (62), Expect = 5.5
Identities = 23/105 (21%), Positives = 27/105 (25%)
Frame = +3
Query: 507 KYFVPKKXXXXXXPPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXPXX 686
+Y +PK PPP P P Q P P
Sbjct: 653 RYPLPKNRYPPPYKQVPPPYKQVPHPYKQVPHPYKQVPAPYKQVPLPYKQVPPPYKQVPH 712
Query: 687 KIXFXXGTXGPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXXLPP 821
T S F PP P+P PP P +PP
Sbjct: 713 PYKQVPATYKQVSPPFKQVPPPYKQVPHPYKQVPP---PYKQVPP 754
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 554 PPPXXXXGPXXPPLXXRGXXGSPPXPPXPXMXFGXPXP 667
P P P PP G G P PP P FG P P
Sbjct: 188 PSPMAGMPPPPPPPPPPGFPGGAPPPPPP--PFGAPPP 223
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 744 PPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
PP P P PP P PP PP P G P PP PP
Sbjct: 295 PPADGSAPAPPPPPPPGGAPPPPPPPPPPP--PGDGGAP-----PPPPPP 337
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 554 PPPXXXXGPXXPPLXXRGXXGSPPXPPXP 640
PPP P PP G PP PP P
Sbjct: 294 PPPADGSAPAPPPPPPPGGAPPPPPPPPP 322
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 533 PXXXXXXPPPXXXXGPXXPPLXXRGXXGSPPXPPXP 640
P PP P PP G G+PP PP P
Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXPQXXXXXLGXPXPXXXP 680
PP P PP G PPP P G P P P
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +2
Query: 533 PXXXXXXPPPXXXXGPXXPPLXXRGXXGSPPXPPXPXMXFG 655
P PPP P PP G +PP PP P + G
Sbjct: 175 PAAPPAPPPPGAPAAPPAPPFG--GPPSAPPPPPAPPVGGG 213
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXP 632
PP PPP P G APPP P
Sbjct: 178 PPAPPPPGAPAAPPAPPFGGPPSAPPPPP 206
Score = 28.3 bits (60), Expect = 9.6
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
Frame = +3
Query: 714 GPXSXXFXXAPPXXXPXPNPXXTTPPXXLPXXX--LPPXPPXAGPXAGXXPXALXHPPXX 887
GP PP P PP P PP PP GP P A PP
Sbjct: 154 GPSIASQPPQPPAPPAAPFMAPAAPPAPPPPGAPAAPPAPPFGGP-----PSA-PPPPPA 207
Query: 888 PPXGXRG 908
PP G G
Sbjct: 208 PPVGGGG 214
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 557 PPXXXXGPXXPPLXXRGXXGSPPXPPXPXMXFGXPXP 667
PP G PP G G PP PP +G P P
Sbjct: 579 PPPPGAGQEGPPPPGAGQGGGPP-PPGAGQGWGLPPP 614
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 765 PNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPPXGXR 905
P+P T PP P PP PP P PP PP R
Sbjct: 1016 PDPLPTDPPTEPPTD--PPTPPPTEPPTPPPTEPPTPPPTDPPTQPR 1060
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 747 PXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGP 842
P P P P PP P PP PP + P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTP 714
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 759 PXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXP 890
P P P PP P PP PP G P P P
Sbjct: 860 PRPRPRRPPPPPPPPPPPPPPPPPPPASSTGSTPGGDKVPSVGP 903
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 546 PPXPPPXXXXXXXXPPXXRGVXXAPPPXP 632
PP PPP PP G PPP P
Sbjct: 677 PPPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 28.7 bits (61), Expect = 7.3
Identities = 22/81 (27%), Positives = 23/81 (28%)
Frame = +3
Query: 618 PPPXPQXXXXXLGXPXPXXXPXXKIXFXXGTXGPXSXXFXXAPPXXXPXPNPXXTTPPXX 797
PPP P +G P P GP PP P PP
Sbjct: 228 PPPFPPTSDPNMGHHPPISGPPTT-----SMSGPPIPVHHGMPPQYGPGRRDM---PPPG 279
Query: 798 LPXXXLPPXPPXAGPXAGXXP 860
P LPP P G G P
Sbjct: 280 APPGMLPPGMPPHGMPPGFGP 300
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 554 PPPXXXXGPXXPPLXXRGXXGSPPXPPXP 640
PPP P PP G PP PP P
Sbjct: 655 PPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 28.3 bits (60), Expect = 9.6
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 732 FXXAPPXXXPXPNPXXTTPPXXLPXXXLPPXPPXAGPXAGXXPXALXHPPXXPP 893
F PP P P P LP LPP PP G P P PP
Sbjct: 677 FSSKPPLTPPPPLPTPIASSEPLP---LPPPPPPTGIDIPHSPSKDDLPLPPPP 727
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 559 PPXXPGXXGTPPXXEGXXXLPPLXPXP 639
PP P GTPP PP+ P P
Sbjct: 2190 PPSGPPPMGTPPSGHPPMGAPPMGPPP 2216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,878,201
Number of Sequences: 59808
Number of extensions: 381788
Number of successful extensions: 2299
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2776707833
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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