Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C11
         (921 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   307   7e-84
AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical ...   111   7e-25
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    31   0.88 
L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical pr...    29   3.5  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  307 bits (754), Expect = 7e-84
 Identities = 147/228 (64%), Positives = 184/228 (80%), Gaps = 1/228 (0%)
 Frame = +2

Query: 86  MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 265
           MS L+QLK  S VVADTGDF A+KE++PTDATTNPSLIL+A+ MEQY  ++D+++ Y K+
Sbjct: 1   MSVLEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKE 60

Query: 266 NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 445
           + S  +E +   +D L V+FG EILK IPGRVS EVDARLSFD  ASI +A+  I  + +
Sbjct: 61  HASGHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEK 120

Query: 446 HGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEAXVTLISPFVG 625
            GI K+RILIKLASTWEGI+AAK LE KHGIHCN+TLLF+  QA+ACAE+ VTLISPFVG
Sbjct: 121 EGISKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVG 180

Query: 626 RILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYKXFGYQTQVMGASFR 766
           RI+DW+V++T +K Y  K+DPGVVSVT+I+NYYK + Y+TQVM ASFR
Sbjct: 181 RIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYKKYDYKTQVMAASFR 228


>AC006729-2|AAM15613.1|  165|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8b protein.
          Length = 165

 Score =  111 bits (267), Expect = 7e-25
 Identities = 50/74 (67%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
 Frame = +2

Query: 548 LTLLFSLYQAIACAEAXVTLISPFVGRILDWYVEHT-KKTYEGKEDPGVVSVTKIYNYYK 724
           +TLLF+  QA+ACAE+ VTLISPFVGRI+DW+V++T +K Y  K+DPGVVSVT+I+NYYK
Sbjct: 1   MTLLFNFEQAVACAESGVTLISPFVGRIMDWFVKNTDQKAYTRKDDPGVVSVTRIFNYYK 60

Query: 725 XFGYQTQVMGASFR 766
            + Y+TQVM ASFR
Sbjct: 61  KYDYKTQVMAASFR 74


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +2

Query: 263 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSV-EVDARLSFDKDASIAKAIKFINLF 439
           D  S++ E++ E    ++++      +    +V + E  A+L+ +KD  I K  + I L 
Sbjct: 218 DPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLN-EKDLVIEKITRKIELL 276

Query: 440 AEHGIKKERILIKLASTWEGIQAAKELEK 526
            E+ +KK++ + +L   +E     K L+K
Sbjct: 277 QENNVKKDQRIYELEQCFESEDYCKILQK 305


>L25598-7|AAA27938.3|  436|Caenorhabditis elegans Hypothetical
           protein C06G4.5 protein.
          Length = 436

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 467 ILIKLASTWEGIQAAKELEK-KHGIHCNLTLLFSLYQAIACAEAXVTLISPFVGRILDWY 643
           I++    T  G+    ++EK    I   +   F++YQ I C    + LI+ F  ++L   
Sbjct: 200 IILYAKETAPGMLTRMKIEKCTVDIDSQMFTAFTIYQFILCYCTPLVLIAFFYTKLLSKL 259

Query: 644 VEHTKKTYEGKEDP 685
            EHT +T++  + P
Sbjct: 260 REHT-RTFKSSQIP 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,540,868
Number of Sequences: 27780
Number of extensions: 424715
Number of successful extensions: 1163
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)