Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C11
(921 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g12230.1 68414.m01415 transaldolase, putative similar to Swis... 142 4e-34
At3g13210.1 68416.m01653 crooked neck protein, putative / cell c... 33 0.20
At1g59580.2 68414.m06701 mitogen-activated protein kinase, putat... 30 2.5
At1g59580.1 68414.m06700 mitogen-activated protein kinase, putat... 30 2.5
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 30 2.5
At3g25130.1 68416.m03138 expressed protein 29 3.3
At3g03760.1 68416.m00382 LOB domain protein 20 / lateral organ b... 29 3.3
At4g09680.1 68417.m01590 expressed protein 29 5.7
At2g10350.1 68415.m01087 Ulp1 protease family protein similar to... 29 5.7
At1g51670.1 68414.m05821 expressed protein 29 5.7
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 28 7.6
>At1g12230.1 68414.m01415 transaldolase, putative similar to
Swiss-Prot:P30148 transaldolase B (EC 2.2.1.2)
[Escherichia coli O157:H7]
Length = 405
Score = 142 bits (343), Expect = 4e-34
Identities = 77/232 (33%), Positives = 135/232 (58%), Gaps = 8/232 (3%)
Frame = +2
Query: 95 LDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQ--YQHILDKAIKYGKDN 268
L+ + S +V DT F+ + + PT AT + +L+L G+ +++ +D A+
Sbjct: 71 LNAVSAFSEIVPDTVVFDDFERFPPTAATVSSALLLGICGLPDTIFRNAVDMALADSSCA 130
Query: 269 G-SSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 445
G + E +++ + V G +++K++PGRVS EVDARL++D + I K + L+ E
Sbjct: 131 GLETTESRLSCFFNKAIVNVGGDLVKLVPGRVSTEVDARLAYDTNGIIRKVHDLLRLYNE 190
Query: 446 HGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTLLFSLYQAIACAEAXVTLISPFVG 625
+ +R+L K+ +TW+GI+AA+ LE + GI ++T ++S QA A ++A ++I FVG
Sbjct: 191 IDVPHDRLLFKIPATWQGIEAARLLESE-GIQTHMTFVYSFAQAAAASQAGASVIQIFVG 249
Query: 626 RILDWYVEHTKKT-----YEGKEDPGVVSVTKIYNYYKXFGYQTQVMGASFR 766
R+ DW H+ T + EDPG+ V + YNY +GY++++M A+ R
Sbjct: 250 RLRDWARNHSGDTEIESAIKSGEDPGLALVKRSYNYIHKYGYKSKLMAAAVR 301
>At3g13210.1 68416.m01653 crooked neck protein, putative / cell
cycle protein, putative similar to Swiss-Prot:P17886
crooked neck protein [Drosophila melanogaster]
Length = 657
Score = 33.5 bits (73), Expect = 0.20
Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 5/151 (3%)
Frame = +2
Query: 59 GEPDTKRTKMSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHIL 238
GE + R L +H V D FEA D ++ G+++ + I
Sbjct: 497 GELERTRALYERLLDRTKHCKVWVDFAKFEASAAEHKEDEEEEDAIERKKDGIKRAREIF 556
Query: 239 DKAIKYGKDNGSSIEEQVAETL-DMLSVLFGCEIL---KIIPGRVSVEVDARLSFDKDAS 406
D+A Y KD+ ++E+ A L D L++ G L +++ ++ +V R ++
Sbjct: 557 DRANTYNKDSTPELKEERAMLLEDWLNMETGFGKLGDVRVVQSKLPKKVKKRKLSSREDG 616
Query: 407 IAKAIKFIN-LFAEHGIKKERILIKLASTWE 496
+ ++ + LF E +++ A W+
Sbjct: 617 CTEYEEYTDYLFPEESETTSLKILEAAHKWK 647
>At1g59580.2 68414.m06701 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK2) identical to mitogen-activated
protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
SWISS-PROT:Q39022; PMID:12119167
Length = 376
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = -2
Query: 809 MVSNHSRXFT-YFPVYGKM----HPLLGSGNQTSCNSCKFLSRKLLRGLPCPHKSSLYVQ 645
M++NH R F + VY M H ++ S S + C++ +LLRGL H +++ +
Sbjct: 98 MMANHKRSFKDVYLVYELMDTDLHQIIKSSQVLSNDHCQYFLFQLLRGLKYIHSANILHR 157
Query: 644 HTNP 633
P
Sbjct: 158 DLKP 161
>At1g59580.1 68414.m06700 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK2) identical to mitogen-activated
protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
SWISS-PROT:Q39022; PMID:12119167
Length = 376
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = -2
Query: 809 MVSNHSRXFT-YFPVYGKM----HPLLGSGNQTSCNSCKFLSRKLLRGLPCPHKSSLYVQ 645
M++NH R F + VY M H ++ S S + C++ +LLRGL H +++ +
Sbjct: 98 MMANHKRSFKDVYLVYELMDTDLHQIIKSSQVLSNDHCQYFLFQLLRGLKYIHSANILHR 157
Query: 644 HTNP 633
P
Sbjct: 158 DLKP 161
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 430 QFIC*TWY*KRKNFN*IGLHLGRNSSSQRVGEEAWNPL*SYTVVLFVPSYCLC*SXCYTN 609
QF C FN + +H+ + S R G E+ S + +L +P YC C C N
Sbjct: 100 QFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYC-CAEGCKNN 158
Query: 610 I 612
I
Sbjct: 159 I 159
>At3g25130.1 68416.m03138 expressed protein
Length = 406
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 477 LIKILSFLIPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFN 337
+ KILSFL P + L+A + + L S S +T+P +F+
Sbjct: 52 IFKILSFLSPLFVTTTLLLLALLSTLHVQDTCLDSESLETQPSFLFS 98
>At3g03760.1 68416.m00382 LOB domain protein 20 / lateral organ
boundaries domain protein 20 (LBD20) identical to
SP|Q9SRV3 LOB domain protein 20 {Arabidopsis thaliana}
Length = 273
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 743 GSGNQTSCNSCKFLSRKLLRG-LPCPHKSS 657
G+G + C +CKFL RK + G + PH S
Sbjct: 45 GTGTASPCGACKFLRRKCVSGCIFAPHFGS 74
>At4g09680.1 68417.m01590 expressed protein
Length = 1075
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +2
Query: 263 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDAR-LSFDKDASIAKAIKFINLF 439
D SSI+ + L + CE +P SV ++A L +D ++ + F
Sbjct: 445 DRTSSIDVLTPDLLSDRNASRICEGHPGMPDCTSVFIEALVLPWDLICTVTEEEAAAPNF 504
Query: 440 AEHGIKKERILIKLASTWEGIQAAKELEKKHGIHCNLTL 556
EH +E K T G+Q+ L H I C +T+
Sbjct: 505 EEHDTSQEIRPHKRCKTNNGLQSQSFLSVPHEISCQMTI 543
>At2g10350.1 68415.m01087 Ulp1 protease family protein similar to
At5g28170, At1g35110, At1g44880, At3g42530, At4g19320,
At5g36020, At4g03970, At3g43010 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1110
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -1
Query: 423 LIAFAMLASLSNDNLASTSTDTRPGIIFNISHPKSTLSISKVSATCSSMELPL 265
LIAF + L D L ST + ++HPK +S+ ++ A S+++LP+
Sbjct: 252 LIAFRNIPGLL-DLLLDDSTSKTILLWKRLTHPKQVISLHQIHALESNLKLPM 303
>At1g51670.1 68414.m05821 expressed protein
Length = 178
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 441 LNMVLKKKEF*L--NWPPLGKEFKQPKSWRRSMESI 542
LN LKK +WPPLG E K P S+ ++ S+
Sbjct: 85 LNFALKKGGIPRAEDWPPLGSESKTPSSYEPALVSM 120
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 743 GSGNQTSCNSCKFLSRKLLRGLPCPHKSSLYVQHTNPIYD 624
GSG+ + +S K+ RK RG P + + + T +YD
Sbjct: 320 GSGSGSGRSSTKYDLRKSKRGFPSHGRKKIKYEFTESVYD 359
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,414,179
Number of Sequences: 28952
Number of extensions: 395374
Number of successful extensions: 1063
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2188225800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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