Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C10
(1021 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g01985.1 68417.m00265 expressed protein 35 0.075
At2g28490.1 68415.m03462 cupin family protein similar to preproM... 35 0.099
At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing ... 34 0.13
At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /... 33 0.23
At1g75550.1 68414.m08780 glycine-rich protein 33 0.23
At4g38680.1 68417.m05477 cold-shock DNA-binding family protein c... 33 0.30
At2g30560.1 68415.m03722 glycine-rich protein 33 0.40
At4g39260.2 68417.m05558 glycine-rich RNA-binding protein 8 (GRP... 32 0.53
At1g02710.1 68414.m00222 glycine-rich protein 32 0.70
At1g29380.1 68414.m03592 hypothetical protein 31 0.93
At2g05440.2 68415.m00575 glycine-rich protein 31 1.6
At5g46730.1 68418.m05757 glycine-rich protein 30 2.1
At4g11660.1 68417.m01864 heat shock factor protein 7 (HSF7) / he... 30 2.1
At2g05440.1 68415.m00574 glycine-rich protein 30 2.1
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 30 2.1
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 30 2.1
At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)... 30 2.8
At1g04800.1 68414.m00476 glycine-rich protein 30 2.8
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 29 3.7
At5g19090.2 68418.m02270 heavy-metal-associated domain-containin... 29 3.7
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 29 3.7
At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP... 29 3.7
At2g04170.1 68415.m00402 meprin and TRAF homology domain-contain... 29 4.9
At1g53625.1 68414.m06096 expressed protein 29 4.9
At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar... 29 6.5
At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP... 29 6.5
At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar... 29 6.5
At1g27710.1 68414.m03387 glycine-rich protein 29 6.5
At1g11850.2 68414.m01364 expressed protein 29 6.5
At5g61030.1 68418.m07659 RNA-binding protein, putative similar t... 28 8.6
At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7) ide... 28 8.6
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 28 8.6
At2g41260.2 68415.m05096 glycine-rich protein / late embryogenes... 28 8.6
At2g41260.1 68415.m05095 glycine-rich protein / late embryogenes... 28 8.6
At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family... 28 8.6
At1g15830.1 68414.m01900 expressed protein 28 8.6
>At4g01985.1 68417.m00265 expressed protein
Length = 579
Score = 35.1 bits (77), Expect = 0.075
Identities = 41/143 (28%), Positives = 45/143 (31%), Gaps = 5/143 (3%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXGVLXXXXXXXXXXXXXXX 835
G GGG G GG G AGGG G GG + GV
Sbjct: 114 GGAGGGVGGGVGAGGGAGGSVGAGGGIGGGAGG-AIGGGASGGVGGGGKGRGGKSGGGAG 172
Query: 834 XXXGGGXGXXXXXXXXXXXXXXXXXXGXGRXGA---RRGXSXGEGPWXGL*SGRGFXTWX 664
GGG G G G GA G + G G G GRG
Sbjct: 173 GGVGGGVGAGGGAGGSVGAGGGIGSGGGGTVGAGGRGSGGASGGGGTVGA-GGRGSGGAS 231
Query: 663 GXVDFXXGR--SGGRXLWGEGQG 601
G V G SGG + G G+G
Sbjct: 232 GGVGVGGGAGGSGGGSVGGGGRG 254
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -2
Query: 1008 GGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
GGGG +G GG G V GG G GG G A G G
Sbjct: 461 GGGGRGSGGAGGGTGGSVGAGGGVGVGGGGGIGGGAGGGVG 501
Score = 31.1 bits (67), Expect = 1.2
Identities = 38/138 (27%), Positives = 41/138 (29%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXGVLXXXXXXXXXXXXXXX 835
G G GG A GG G GGG G GG GV G G
Sbjct: 252 GRGSGGVGASGGAGGNVGAGGGLGGGVGGGVGG-GVG--GSVGGAVGGAVGGAVGGGGGG 308
Query: 834 XXXGGGXGXXXXXXXXXXXXXXXXXXGXGRXGARRGXSXGEGPWXGL*SGRGFXTWXGXV 655
GGG G G G G G G G+ G G G V
Sbjct: 309 SVGGGGRGSGGASGGASGGASGGAGGSVGAGGG-VGGGVGGGVGGGVGGGVG-GAVGGAV 366
Query: 654 DFXXGRSGGRXLWGEGQG 601
G GG + G G+G
Sbjct: 367 GGAVGGGGGGSVGGGGRG 384
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGG G GG+ GR GGG G GG GV A G G
Sbjct: 91 GAIGGGASGGAGGGGK-GRGRKGGGGAGGGVGG-GVGAGGGAG 131
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFA-GGGXRGXXGG 916
G GGGG G GG G V GGG RG GG
Sbjct: 485 GVGGGGGIGGGAGGGVGGGVGGGVGGGVRGAVGG 518
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G G GG G G G A GG G GG G A G G
Sbjct: 382 GRGSGGASGGASGGASGGASGGASGGASGGVGGAG-GAGGSVG 423
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXG-GXGVXAWGDXG 886
G GG G +G GG G AGGG G G GV A G G
Sbjct: 523 GVGGAGRGSGGASGGA-GAGGGAGGGVGGGANVGVGVGAGGSTG 565
>At2g28490.1 68415.m03462 cupin family protein similar to
preproMP27-MP32 [Cucurbita cv. Kurokawa Amakuri]
GI:691752, allergen Gly m Bd 28K [Glycine max]
GI:12697782, vicilin [Matteuccia struthiopteris]
GI:1019792; contains Pfam profile PF00190: Cupin
Length = 511
Score = 34.7 bits (76), Expect = 0.099
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXA--WGDXG 886
G GGG G GG WG GGG G GG G WG G
Sbjct: 35 GGAGGGEWGGAEGGGAWG----GGGGGGGAWGGEGEGGGEWGGGG 75
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -2
Query: 1008 GGGGXXAGXXXGGRWGRVCFAGG--GXRGXXGGXGVXAW 898
GGG G GG WG GG G G GG G W
Sbjct: 47 GGGAWGGGGGGGGAWGGEGEGGGEWGGGGEGGGGGRRGW 85
>At5g40490.1 68418.m04910 RNA recognition motif (RRM)-containing
protein ribonucleoprotein, Xenopus laevis, PIR:S40778;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 423
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 1014 GXGGGGXXA-GXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G GG G + GGG RG GG G
Sbjct: 379 GVGGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGGG 414
>At2g21060.1 68415.m02500 cold-shock DNA-binding family protein /
glycine-rich protein (GRP2) identical to Glycine-rich
protein 2b (AtGRP2b) [Arabidopsis thaliana]
SWISS-PROT:Q38896; contains Pfam domains PF00313:
'Cold-shock' DNA-binding domain and PF00098: Zinc knuckle
Length = 201
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -2
Query: 1017 CGXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
C GGGG +G GGR+G +GGG G GG + G+ G
Sbjct: 151 CSQGGGGY-SGGGGGGRYG----SGGGGGGGGGGLSCYSCGESG 189
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFA-GGGXRGXXGG 916
G GGGG G GG +G G G RG GG
Sbjct: 101 GFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGGG 134
>At1g75550.1 68414.m08780 glycine-rich protein
Length = 167
Score = 33.5 bits (73), Expect = 0.23
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG G GG WG + GGG GG G WG G
Sbjct: 77 GGGGGGGGGGGGGGGGWG---WGGGG-----GGGGWYKWGCGG 111
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G G WG GG + GG G
Sbjct: 79 GGGGGGGGGGGGGGWGWGGGGGGGGWYKWGCGGGG 113
>At4g38680.1 68417.m05477 cold-shock DNA-binding family protein
contains Pfam domains PF00313: 'Cold-shock' DNA-binding
domain and PF00098: Zinc knuckle
Length = 203
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG G GG G + GGG G GG + G+ G
Sbjct: 152 GGGGGGYGGGGGYGGGGGG--YGGGGRGGGGGGGSCYSCGESG 192
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -2
Query: 1017 CGXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
C GGGG G GG +G GGG G GG G G G
Sbjct: 144 CSEGGGGYGGG---GGGYG----GGGGYGGGGGGYGGGGRGGGG 180
>At2g30560.1 68415.m03722 glycine-rich protein
Length = 171
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GG G G GGR G GGG +G GG G G G
Sbjct: 10 GGGGKGGGGGGSGGGRGGG---GGGGAKGGCGGGGKSGGGGGG 49
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG +G GG+ G GGG G GG G G G
Sbjct: 83 GGGGGGGISGGGAGGKSG----CGGGKSGGGGGGGKNGGGCGG 121
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 1005 GGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWG 895
GGG G GG+ G C GGG +G G G G
Sbjct: 102 GGGKSGGGGGGGKNGGGCGGGGGGKGGKSGGGSGGGG 138
>At4g39260.2 68417.m05558 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1
protein) (GRP8) {Arabidopsis thaliana} isoform contains a
non-consensus CG acceptor splice site at intron 2
Length = 126
Score = 32.3 bits (70), Expect = 0.53
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGG--RWGRVCFAGGGXRGXXGGXGVXAW 898
G GGGG G GG G ++GGG G GG G W
Sbjct: 86 GSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGGGGW 126
>At1g02710.1 68414.m00222 glycine-rich protein
Length = 96
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG G + G +GGG R GG G GD G
Sbjct: 52 GEGGGGEGGGGQKISKGGGGGGSGGGQRSSSGGGGGGGEGDGG 94
>At1g29380.1 68414.m03592 hypothetical protein
Length = 228
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAW 898
G GGGG G GG + GGG G GG G W
Sbjct: 114 GGGGGGGDTGAGAGGGG----YGGGGDTGAGGGVGSGQW 148
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRV-CFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG G GG G AG G G GG A G G
Sbjct: 101 GGGGGGYGGGTPGGGGGGGGDTGAGAGGGGYGGGGDTGAGGGVG 144
>At2g05440.2 68415.m00575 glycine-rich protein
Length = 154
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -2
Query: 1008 GGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXGV 883
GGGG G GG G + GGG G GG G G G+
Sbjct: 104 GGGGGHYGGGGGGHGGGGHYGGGGG-GYGGGGGHHGGGGHGL 144
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGV 907
G GGGG G GG G + GGG GG G+
Sbjct: 111 GGGGGGHGGGGHYGGGGGG--YGGGGGHHGGGGHGL 144
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG G GG G +GGG G GG +G G
Sbjct: 216 GSGGGGAYGG---GGAHGGGYGSGGGEGGGYGGGAAGGYGGGG 255
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G GG G G G G GG G
Sbjct: 253 GGGGGGEGGGGSYGGEHGGGSGGGHGGGGGHGGGG 287
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG G G +G G G G GG G G G
Sbjct: 173 GGGGGGSAGGAHGGSGYGGGEGGGAGGGGSHGGAGGYGGGGGG 215
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 1008 GGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
GG G G GG G + GGG G G G G G
Sbjct: 204 GGAGGYGGGGGGGSGGGGAYGGGGAHGGGYGSGGGEGGGYG 244
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 1005 GGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWG 895
GGG G GG G GGG G GG G G
Sbjct: 190 GGGEGGGAGGGGSHGGAGGYGGGGGGGSGGGGAYGGG 226
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G G GG G GG G GGG G G G G G
Sbjct: 232 GYGSGGGEGGGYGGGAAGGYGGGGGGGEGGGGSYGGEHGGGSG 274
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVC--FAGGGXRGXXGGXG 910
G GGGG G GG G + GG G GG G
Sbjct: 38 GHGGGGGSGGVSSGGYGGESGGGYGGGSGEGAGGGYG 74
Score = 28.7 bits (61), Expect = 6.5
Identities = 34/138 (24%), Positives = 38/138 (27%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXGVLXXXXXXXXXXXXXXX 835
G GGG G GG G +A GG G GG G A
Sbjct: 59 GGYGGGSGEG-AGGGYGGAEGYASGGGSGHGGGGGGAASSGGYASGAGEGGGGGYGGAAG 117
Query: 834 XXXGGGXGXXXXXXXXXXXXXXXXXXGXGRXGARRGXSXGEGPWXGL*SGRGFXTWXGXV 655
GGG G G G G + G G G G G
Sbjct: 118 GHAGGGGGGSGGGGGSAYGAGGEHASGYGNGAGEGGGAGASGYGGGAYGGGGGHGGGGGG 177
Query: 654 DFXXGRSGGRXLWGEGQG 601
G GG +G G+G
Sbjct: 178 GSAGGAHGGSG-YGGGEG 194
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGG G GG G + GGG G GG G G
Sbjct: 191 GGEGGGAGGGGSHGGAGG---YGGGGGGGSGGGGAYGGGGAHG 230
>At4g11660.1 68417.m01864 heat shock factor protein 7 (HSF7) / heat
shock transcription factor 7 (HSTF7) identical to heat
shock factor protein 7 (HSF7) SP:Q9T0D3 from [Arabidopsis
thaliana]
Length = 377
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 1020 LCGXGGGGXXAGXXXGGRWGRV-CFAGGGXRGXXGGXG 910
+ G GGGG AG G G C AGGG G GG G
Sbjct: 12 VAGVGGGG--AGCSAGNSGGSSGCGAGGGGGGSGGGGG 47
>At2g05440.1 68415.m00574 glycine-rich protein
Length = 127
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -2
Query: 1020 LCGXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXGV 883
L G GGGG G G G GGG G GG G G G+
Sbjct: 72 LDGYGGGGGHYGGGGGHYGGGGGHYGGGGGGYGGGGGHHGGGGHGL 117
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 protein
GI:1279562 from [Medicago sativa]
Length = 557
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G G G +G G GR F GG RG GG G
Sbjct: 492 GRGNGRFGSGGGRGRDGGRGRFGSGGGRGRDGGRG 526
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 729 PSVRPPAPXPXXTGXLSXLCPXGTPAPPXXPP 824
P RPP P P S P P PP PP
Sbjct: 595 PPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPP 626
>At2g21660.1 68415.m02577 glycine-rich RNA-binding protein (GRP7)
SP|Q03250 Glycine-rich RNA-binding protein 7 {Arabidopsis
thaliana}
Length = 176
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGG 916
G GGGG +G G G + GGG R GG
Sbjct: 97 GGGGGGYRSGGGGGYSGGGGSYGGGGGRREGGG 129
>At1g04800.1 68414.m00476 glycine-rich protein
Length = 200
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 1020 LCGXGGGGXXAGXXXGGRW--GRVCFAGGGXRGXXGGXGVXAWGDXGV 883
L G GG G GG W G V GGG G GG G GV
Sbjct: 56 LGGGGGISGGGGFGAGGGWIGGSVGGFGGGIGGGFGGGGFGGGAGKGV 103
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 1008 GGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
GG G GG +G F GG +G GG G G G
Sbjct: 76 GGSVGGFGGGIGGGFGGGGFGGGAGKGVDGGFGKGVDGGAG 116
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/66 (24%), Positives = 18/66 (27%)
Frame = +2
Query: 818 PPPXXXSXXXXXXXXXXXXXXXXXXSPHAXTPXXXXXXXXXXXAKHTLPHLPPXXXPAXX 997
PPP S PH P + + PH PP
Sbjct: 26 PPPSHISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHPHQPPPPPHVLP 85
Query: 998 PPPPXP 1015
PPPP P
Sbjct: 86 PPPPTP 91
>At5g19090.2 68418.m02270 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 465
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G + ++ GGG G GG G
Sbjct: 103 GKGGGGGGGGPANNNKGQKIGGGGGGGGGGGGGGG 137
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G + ++ GGG G GG G
Sbjct: 103 GKGGGGGGGGPANNNKGQKIGGGGGGGGGGGGGGG 137
>At4g39260.1 68417.m05557 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1
protein) (GRP8) {Arabidopsis thaliana} isoform contains a
non-consensus CG acceptor splice site at intron 2
Length = 169
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGG--RWGRVCFAGGGXRGXXGGXG 910
G GGGG G GG G ++GGG G GG G
Sbjct: 86 GSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGG 122
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G GGR + GGG G GG G
Sbjct: 133 GSGGGGGGRGYGGGGRREGGGY-GGGDGGSYGGGG 166
>At2g04170.1 68415.m00402 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to NtN2 [Medicago truncatula] GI:3776084; contains Pfam
profile PF00917: MATH domain
Length = 420
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWG 895
G GGG G GGR G F GG GG G G
Sbjct: 5 GCGGGPGRGGRGFGGRGGGPGFGPGGPGFGPGGPGFGPGG 44
>At1g53625.1 68414.m06096 expressed protein
Length = 89
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 1017 CGXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGG 916
CG G GG G GG C GGG G GG
Sbjct: 58 CGGGDGGGDGGGDGGGGG---CGGGGGCGGGGGG 88
>At5g14610.1 68418.m01713 DEAD box RNA helicase, putative similar to
RNA helicase DRH1 [Arabidopsis thaliana] GI:3149952;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF00397:
WW domain
Length = 713
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -2
Query: 1005 GGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
GGG G RWG GGG RG G G G+ G
Sbjct: 610 GGG---GMNKFRRWGTPSSGGGGGRGGYGDSGYGGRGESG 646
>At4g39260.4 68417.m05560 glycine-rich RNA-binding protein 8 (GRP8)
(CCR1) SP|Q03251 Glycine-rich RNA-binding protein 8 (CCR1
protein) (GRP8) {Arabidopsis thaliana} isoform contains a
non-consensus CG acceptor splice site at intron 2
Length = 105
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G GGR + GGG G GG G
Sbjct: 69 GSGGGGGGRGYGGGGRREGGGY-GGGDGGSYGGGG 102
>At2g42520.1 68415.m05262 DEAD box RNA helicase, putative similar to
SP|O00571 DEAD-box protein 3 (Helicase-like protein 2)
{Homo sapiens}, DEAD box RNA helicase DDX3 [Homo sapiens]
GI:3523150; contains Pfam profiles PF00270: DEAD/DEAH box
helicase, PF00271: Helicase conserved C-terminal domain
Length = 633
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGDXG 886
G GGGG G GG G + GGG G GG G + G G
Sbjct: 588 GGGGGGYGGGGGYGGGGG---YGGGGGYG--GGYGGASSGGYG 625
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 1008 GGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAW 898
GGGG G GG G GG G GG AW
Sbjct: 596 GGGGYGGGGGYGGGGGYGGGYGGASSGGYGGEPPSAW 632
>At1g27710.1 68414.m03387 glycine-rich protein
Length = 212
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWG 895
G GGG G GG G C GGG G G GV G
Sbjct: 170 GGIGGGVIIGGGGGG-CGGSCSGGGGGGGGYGHGGVSTKG 208
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
G GGGG G GG G + GG G GG G
Sbjct: 122 GGGGGGVVIGGGFGGGAG---YGSGGGLGWDGGNG 153
>At1g11850.2 68414.m01364 expressed protein
Length = 108
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGG 916
G GGGG G GG G F GGG G GG
Sbjct: 75 GLGGGGGGLGGGGGGLLGGGGF-GGGAGGGLGG 106
>At5g61030.1 68418.m07659 RNA-binding protein, putative similar to
RNA-binding protein from [Solanum tuberosum] GI:15822705,
[Nicotiana tabacum] GI:15822703, [Nicotiana sylvestris]
GI:624925; contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 309
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGG-GXRGXXGGXGVXAWGDXG 886
G GGGG G GG G + GG G G GG G A G G
Sbjct: 124 GFGGGGYGGG--GGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGG 165
>At5g52470.1 68418.m06510 fibrillarin 1 (FBR1) (FIB1) (SKIP7)
identical to fibrillarin 1 GI:9965653 from [Arabidopsis
thaliana]; C-terminus identical to SKP1 interacting
partner 7 GI:10716959 from [Arabidopsis thaliana];
contains Pfam domain PF01269: Fibrillarin
Length = 308
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGR-WGRVCFAGGGXRGXXGGXG 910
G GGGG G GGR +G GGG G G G
Sbjct: 8 GRGGGGFRGGRDGGGRGFGGGRSFGGGRSGDRGRSG 43
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.3 bits (60), Expect = 8.6
Identities = 25/122 (20%), Positives = 30/122 (24%)
Frame = +2
Query: 656 TLPXQVXKPRPDYNPHQGPSPXEXPLRAPXRPXPXDXRXXXXXXXXXXXXXXPXPPPXXX 835
T P P P Y+P P P P+ +P P P P PP
Sbjct: 424 TSPPPPSPPPPVYSPPP-PPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSP 482
Query: 836 SXXXXXXXXXXXXXXXXXXSPHAXTPXXXXXXXXXXXAKHTLPHLPPXXXPAXXPPPPXP 1015
P P + P P PPPP P
Sbjct: 483 PPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPP 542
Query: 1016 HN 1021
H+
Sbjct: 543 HS 544
>At2g41260.2 68415.m05096 glycine-rich protein / late embryogenesis
abundant protein (M17) identical to late-embryogenesis
abundant M17 protein GI:3342551 from [Arabidopsis
thaliana]
Length = 280
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRG 928
G GGGG G G RWG C GG RG
Sbjct: 119 GRGGGGGGGGGRGGCRWG--C-CGGWWRG 144
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRG 928
G GGGG G G RWG C GG RG
Sbjct: 174 GRGGGGGGGGGRGGCRWG--C-CGGWWRG 199
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRG 928
G GGGG G G RWG C GG RG
Sbjct: 229 GRGGGGGGGGGRGGCRWG--C-CGGWWRG 254
>At2g41260.1 68415.m05095 glycine-rich protein / late embryogenesis
abundant protein (M17) identical to late-embryogenesis
abundant M17 protein GI:3342551 from [Arabidopsis
thaliana]
Length = 225
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRG 928
G GGGG G G RWG C GG RG
Sbjct: 119 GRGGGGGGGGGRGGCRWG--C-CGGWWRG 144
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 1014 GXGGGGXXAGXXXGGRWGRVCFAGGGXRG 928
G GGGG G G RWG C GG RG
Sbjct: 174 GRGGGGGGGGGRGGCRWG--C-CGGWWRG 199
>At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family
protein
Length = 523
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 999 GXXAGXXXGGRWGRVCFAGGGXRGXXGGXGVXAWGD 892
G G GGR GR G G RG G G W D
Sbjct: 284 GEAEGSSVGGRGGRGRGRGRGARGRGRGRGGDGWRD 319
>At1g15830.1 68414.m01900 expressed protein
Length = 483
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 1017 CGXGGGGXXAGXXXGGRWGRVCFAGGGXRGXXGGXG 910
CG GGGG G GG+ + GGG +G G G
Sbjct: 399 CGGGGGG---GDGGGGQGTGIGGGGGGEQGTGVGGG 431
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,393,833
Number of Sequences: 28952
Number of extensions: 183449
Number of successful extensions: 1667
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1386
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2491999472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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