Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_C09
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 66 3e-11
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 60 2e-09
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 42 5e-04
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 38 0.011
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 30 2.2
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 30 2.2
04_04_0464 - 25405629-25405665,25406644-25406710,25408112-254083... 29 6.8
11_01_0307 + 2304500-2306023 28 9.0
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 66.5 bits (155), Expect = 3e-11
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 2/195 (1%)
Frame = -3
Query: 795 ASMNKGDCFXFSXDNDIYVFVGEKAKNVEKLKAISXANQVRDQDHHGRGKVDIVD--KYS 622
+S+N D F + IY F G + E+ KA+ +++ H+G V IVD K
Sbjct: 164 SSLNHDDVFILDTEKKIYQFNGANSNIQERAKALEAIQHLKETYHNGVCDVAIVDDGKLQ 223
Query: 621 SDVDVQKXFTAXGSGVKDLVPDESTGGDDQEFERNEASNVIXFEVSDATGKIKVTPLSKP 442
++ D + + G + ++ DD E + +++ K++ T L+K
Sbjct: 224 AESDSGEFWVLFGGFAP--IGKKAICDDDVVLETTAPK---LYSINNGQLKLEDTVLTKS 278
Query: 441 FKQENLSPQNXYILDTIXGNIYVWIGKQATANEKXQAMTKAQELLNAKNYPSWVQVTRVL 262
+ N +++D ++++W+G+ E+ A +E + +N P +VTRV+
Sbjct: 279 ILENN----KCFLVDC-GSDLFIWVGRLTQVEERKAASAAVEEFIATQNRPKTTRVTRVI 333
Query: 261 QNTEPAAFKQYFFTW 217
Q E FK F +W
Sbjct: 334 QGYENHTFKSKFESW 348
Score = 48.4 bits (110), Expect = 8e-06
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Frame = -3
Query: 546 GGDDQEFERNEASNVIX----FEVSDATGKIKVTPLSKPFKQENLSPQNXYILDTIXGNI 379
GG RN +V+ + S GK++VT + F Q++L ++ +LDT G +
Sbjct: 638 GGKQNYTSRNATHDVVREPHLYTFSLRNGKLEVTEIFN-FSQDDLLTEDMMVLDT-HGEV 695
Query: 378 YVWIGKQATANEKXQAMTKAQELL-NAKNYPSW---VQVTRVLQNTEPAAFKQYFFTW 217
+VW+G+ A EK +A Q+ +A + S V + +V++ EP F+ Y F+W
Sbjct: 696 FVWMGQCVDAKEKQKAFEIGQKYAEHAAAFESLSPDVPLYKVVEGNEPCFFRTY-FSW 752
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 60.1 bits (139), Expect = 2e-09
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 2/195 (1%)
Frame = -3
Query: 795 ASMNKGDCFXFSXDNDIYVFVGEKAKNVEKLKAISXANQVRDQDHHGRGKVDIVD--KYS 622
+S+N D F + I+ F G + E+ KA+ ++D +H G+ V V+ K
Sbjct: 219 SSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYLKDSNHEGKCDVGSVEDGKLM 278
Query: 621 SDVDVQKXFTAXGSGVKDLVPDESTGGDDQEFERNEASNVIXFEVSDATGKIKVTPLSKP 442
+D D + + G G L T D + +S +I T + L++
Sbjct: 279 ADADAGEFWGLFG-GFAPL--PRKTFSDLNGKDSAFSSKLICLNKGQ-TVPVDFDVLTR- 333
Query: 441 FKQENLSPQNXYILDTIXGNIYVWIGKQATANEKXQAMTKAQELLNAKNYPSWVQVTRVL 262
E L Y+LD IYVW+G++ E+ +A + A+ELL N P + R++
Sbjct: 334 ---ELLDSTKCYLLDC-GSEIYVWMGRETPLEERKRAGSAAEELLREVNRPK-SHIVRLM 388
Query: 261 QNTEPAAFKQYFFTW 217
+ E F+ F W
Sbjct: 389 EGFETVIFRSKFSKW 403
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -3
Query: 567 LVPDES-TGGDDQEFERNEASNVIXFEVSDATGKIKVTPLSKPFKQENLSPQNXYILDTI 391
++P+E + E NE +V V GK V PF + +L+ + +ILDT
Sbjct: 175 IIPEEGGIASGFRHTEINEREHVTRLFV--CRGKHTVHVKEVPFARSSLNHDDIFILDT- 231
Query: 390 XGNIYVWIGKQATANEKXQAMTKAQELLNAKN 295
I+ + G ++ E+ +A+ Q L ++ +
Sbjct: 232 KSKIFQFNGSNSSIQERAKALEVVQYLKDSNH 263
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -3
Query: 474 GKIKVTPLSKPFKQENLSPQNXYILDTIXGNIYVWIGKQATANEKXQAMTKAQELLN--- 304
G +K+ + F Q++L ++ +ILD +I+VW+G+Q + QA+ ++ +
Sbjct: 633 GNLKIKEIYH-FTQDDLMTEDVFILDC-HSDIFVWVGQQVDVKVRLQALDIGEKFVKLDF 690
Query: 303 -AKNYPSWVQVTRVLQNTEPAAFKQYFFTW 217
+N S + +++ +EP F + FFTW
Sbjct: 691 LMENLSSDTPIFVIMEGSEPTFFTR-FFTW 719
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = -3
Query: 441 FKQENLSPQNXYILDTIXGNIYVWIGKQATANEKXQAMTKAQELL----NAKNYPSWVQV 274
F Q++L ++ ++LD +++VW+G++ A + QAM ++ L +N +
Sbjct: 622 FTQDDLMAEDIFVLDC-RTDLFVWVGQEVDAKLRSQAMDIGEKFLLHDFLMENLSQDTPI 680
Query: 273 TRVLQNTEPAAFKQYFFTW 217
V + +EP F + FFTW
Sbjct: 681 FIVTEGSEPQFFTR-FFTW 698
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -3
Query: 678 VRDQDHHGRGKVDIVDKYSSDVDVQKXFTAXGSGVKDLVPDESTG---GDDQEFERNEAS 508
+ Q HG V + Y D D + F GSG +DL ++ T DQ+FE+ A+
Sbjct: 113 IAGQSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAA 172
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -3
Query: 678 VRDQDHHGRGKVDIVDKYSSDVDVQKXFTAXGSGVKDLVPDESTGGD---DQEFERNEAS 508
+ Q HG V + Y D D + F GSG +DL ++ T + DQ+FE+ A+
Sbjct: 302 IAGQSTHGAQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTSKEQSFDQKFEKLNAA 361
>04_04_0464 -
25405629-25405665,25406644-25406710,25408112-25408373,
25408989-25409198,25409818-25410006,25410087-25410548,
25410889-25410936,25411972-25412301
Length = 534
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 484 RRHGKDQSDATIEAFQARELESTERVYFGHHXWQHLRLDREAG 356
R H D + E+ + R LE+ ER Y W+ L+ D E+G
Sbjct: 22 RNHEDDDDEEEEESGEGRVLEAWERAYADDRSWEALQED-ESG 63
>11_01_0307 + 2304500-2306023
Length = 507
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 406 YFGHHXWQHLRLDREAGYRKREXSGHDESSGIVER*ELSFVGASDQSF 263
Y GH WQ R R AG ++E + SSG + +L +G+S+ SF
Sbjct: 464 YVGHRLWQRRRRRRRAGGMEQELT----SSGPYK--DLKSMGSSNSSF 505
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,392,932
Number of Sequences: 37544
Number of extensions: 316101
Number of successful extensions: 723
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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