Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C08
         (1336 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical...    29   9.8  
AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical...    29   9.8  

>AC024817-53|AAP13744.1|  549|Caenorhabditis elegans Hypothetical
            protein Y54G2A.26b protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 958  PXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXSP 1056
            P  +P  NP+  P  PP  HH   PQ  P  SP
Sbjct: 27   PGVVPTSNPYYQPPVPP-QHHHMQPQ-APMMSP 57


>AC024817-52|AAF59568.4|  611|Caenorhabditis elegans Hypothetical
            protein Y54G2A.26a protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 958  PXXLPXLNPFXXPSXPPXXHHRXHPQXXPPXSP 1056
            P  +P  NP+  P  PP  HH   PQ  P  SP
Sbjct: 89   PGVVPTSNPYYQPPVPP-QHHHMQPQ-APMMSP 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,792,342
Number of Sequences: 27780
Number of extensions: 53640
Number of successful extensions: 178
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3746404080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)