Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C04
         (998 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   2.1  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   6.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   8.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   8.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   8.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   8.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   8.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   8.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   8.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   8.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   8.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   8.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   8.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 210 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 115
           K PG S     GD + + V  H     T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 503 PHHPLPRPTYHSQRFHPVRHXNYEDYGLHQ 592
           PHH +     H  +F+P  H   +   LHQ
Sbjct: 105 PHHEIKLQHLHQSKFNP--HEEVKLQHLHQ 132


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 619 IIHKFPDSNLMKSIIFVVAMSNWMESL 539
           II +F    L   +  VV +SNW E L
Sbjct: 239 IIARFNIERLCNGLKRVVKLSNWREPL 265


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 698 CAQCRRSRDVSRGHDGAHTP 639
           C  C++++  +R H G  TP
Sbjct: 172 CDLCQKTKSSNRPHQGPLTP 191


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 204 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 115
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 204 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 115
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 20  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 74


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +3

Query: 405 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLITVNDSIQLDXAT 569
           H + P    Y   + +R+A+     P   TH   + +Y D   +   +   D +T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,527
Number of Sequences: 336
Number of extensions: 4599
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 28444075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)