Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_C02
         (971 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.89 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   4.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   4.7  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -1

Query: 377 YPKAPAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTV 252
           YP+  A +    RS  R+L +DD    +  +  K G     V
Sbjct: 157 YPRVSAQMKADLRSHFRALCQDDTPMVRRAAATKLGELAQVV 198


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 143 DPATDQLINYKKTLKDSPGFHHH*IWSSXLESKRRYK 253
           DP  D +  Y   LK+ P  + H  W++  + +R  K
Sbjct: 436 DPNGDYIRKYLPVLKNMPSQYIHEPWTAPEQVQRAAK 472


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 476 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 375
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 476 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 375
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 476 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 375
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 476 PTVENLTAIGVLLPMDSNTLAALYLVMS*VTSKY 375
           P +  +   G    MDSN + A+Y+++  + + Y
Sbjct: 356 PDISEIIPTGDDTTMDSNDMTAIYVLLINIFASY 389


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 257 WARMVQPYYRMLTFLMKCHPLTGSVFQNEW 346
           W R  Q YY  + F+ +C    G+ F+ +W
Sbjct: 205 WQRGSQ-YYDGVPFVTQCPIQQGNTFRYQW 233


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 257 WARMVQPYYRMLTFLMKCHPLTGSVFQNEW 346
           W R  Q YY  + F+ +C    G+ F+ +W
Sbjct: 205 WQRGSQ-YYDGVPFVTQCPIQQGNTFRYQW 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,178
Number of Sequences: 336
Number of extensions: 3257
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27513178
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)