Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B24
(1067 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9 pro... 92 3e-18
BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein. 92 3e-18
AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9 p... 92 3e-18
AF064606-1|AAC17111.1| 243|Homo sapiens KB07 protein protein. 92 3e-18
AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein. 92 3e-18
BC121177-1|AAI21178.1| 620|Homo sapiens RAN binding protein 10 ... 89 2e-17
BC121176-1|AAI21177.1| 620|Homo sapiens RAN binding protein 10 ... 89 2e-17
BC099917-1|AAH99917.1| 620|Homo sapiens RAN binding protein 10 ... 89 2e-17
AY337313-1|AAR01220.1| 620|Homo sapiens Ran-binding protein 10 ... 89 2e-17
AB040897-1|BAA95988.1| 621|Homo sapiens KIAA1464 protein protein. 89 2e-17
BC019886-1|AAH19886.1| 486|Homo sapiens Unknown (protein for IM... 87 8e-17
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 33 2.3
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 33 2.3
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 33 2.3
AB209431-1|BAD92668.1| 951|Homo sapiens TYRO3 protein tyrosine ... 32 3.1
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 4.1
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 32 4.1
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 32 4.1
AF306510-1|AAK15469.1| 500|Homo sapiens RANBPM protein. 32 4.1
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 32 4.1
AB008515-1|BAA23216.1| 500|Homo sapiens RanBPM protein. 32 4.1
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 5.4
>Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 92.3 bits (219), Expect = 3e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDKFS IGLSQNNLRVHY G G T +DAASVRATHPIPAA
Sbjct: 161 QETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAA 211
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 209 PAACGIYYFEVKIVSKGRDGYMG 231
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 238 GVNMNRLPGWDKHSYG 253
>BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein.
Length = 802
Score = 92.3 bits (219), Expect = 3e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDKFS IGLSQNNLRVHY G G T +DAASVRATHPIPAA
Sbjct: 234 QETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAA 284
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 282 PAACGIYYFEVKIVSKGRDGYMG 304
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 311 GVNMNRLPGWDKHSYG 326
>AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 92.3 bits (219), Expect = 3e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDKFS IGLSQNNLRVHY G G T +DAASVRATHPIPAA
Sbjct: 161 QETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAA 211
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 209 PAACGIYYFEVKIVSKGRDGYMG 231
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 238 GVNMNRLPGWDKHSYG 253
>AF064606-1|AAC17111.1| 243|Homo sapiens KB07 protein protein.
Length = 243
Score = 92.3 bits (219), Expect = 3e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDKFS IGLSQNNLRVHY G G T +DAASVRATHPIPAA
Sbjct: 12 QETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAA 62
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 60 PAACGIYYFEVKIVSKGRDGYMG 82
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 89 GVNMNRLPGWDKHSYG 104
>AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein.
Length = 729
Score = 92.3 bits (219), Expect = 3e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDKFS IGLSQNNLRVHY G G T +DAASVRATHPIPAA
Sbjct: 161 QETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAA 211
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 209 PAACGIYYFEVKIVSKGRDGYMG 231
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 238 GVNMNRLPGWDKHSYG 253
>BC121177-1|AAI21178.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 89.4 bits (212), Expect = 2e-17
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDK++ IGLSQ NLRVHY G G H+DAASVRATHPIPAA
Sbjct: 49 QETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAA 99
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 97 PAACGIYYFEVKIVSKGRDGYMG 119
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 126 GVNMNRLPGWDKHSYG 141
>BC121176-1|AAI21177.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 89.4 bits (212), Expect = 2e-17
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDK++ IGLSQ NLRVHY G G H+DAASVRATHPIPAA
Sbjct: 49 QETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAA 99
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 97 PAACGIYYFEVKIVSKGRDGYMG 119
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 126 GVNMNRLPGWDKHSYG 141
>BC099917-1|AAH99917.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 89.4 bits (212), Expect = 2e-17
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDK++ IGLSQ NLRVHY G G H+DAASVRATHPIPAA
Sbjct: 49 QETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAA 99
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 97 PAACGIYYFEVKIVSKGRDGYMG 119
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 126 GVNMNRLPGWDKHSYG 141
>AY337313-1|AAR01220.1| 620|Homo sapiens Ran-binding protein 10
protein.
Length = 620
Score = 89.4 bits (212), Expect = 2e-17
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDK++ IGLSQ NLRVHY G G H+DAASVRATHPIPAA
Sbjct: 49 QETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAA 99
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 97 PAACGIYYFEVKIVSKGRDGYMG 119
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 126 GVNMNRLPGWDKHSYG 141
>AB040897-1|BAA95988.1| 621|Homo sapiens KIAA1464 protein protein.
Length = 621
Score = 89.4 bits (212), Expect = 2e-17
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +3
Query: 168 EETPLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
+ETPLPR+WS KDK++ IGLSQ NLRVHY G G H+DAASVRATHPIPAA
Sbjct: 50 QETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAA 100
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 98 PAACGIYYFEVKIVSKGRDGYMG 120
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 127 GVNMNRLPGWDKHSYG 142
>BC019886-1|AAH19886.1| 486|Homo sapiens Unknown (protein for
IMAGE:4419330) protein.
Length = 486
Score = 87.4 bits (207), Expect = 8e-17
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = +3
Query: 177 PLPRAWSTKDKFS*IGLSQNNLRVHYXGXGXTHRDAASVRATHPIPAA 320
PLPR+WS KDKFS IGLSQNNLRVHY G G T +DAASVRATHPIPAA
Sbjct: 1 PLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAA 48
Score = 39.1 bits (87), Expect = 0.027
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 313 PPPCGLYYFEVRIVSKGRXG*WG 381
P CG+YYFEV+IVSKGR G G
Sbjct: 46 PAACGIYYFEVKIVSKGRDGYMG 68
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 75 GVNMNRLPGWDKHSYG 90
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 32.7 bits (71), Expect = 2.3
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +1
Query: 619 PXXXLSSTXXRPXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPPPTAFQXPSXF 798
P T RP PP PP P PP G G + PPP F
Sbjct: 228 PPFPAGQTPPRPPLGPPGPPGPPGP-PPPGQVLPPPLAGPPNRG--DRPPPPVLFPGQPF 284
Query: 799 XXCPXLPSXXGPP 837
P P GPP
Sbjct: 285 GQPPLGPLPPGPP 297
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 32.7 bits (71), Expect = 2.3
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +1
Query: 619 PXXXLSSTXXRPXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPPPTAFQXPSXF 798
P T RP PP PP P PP G G + PPP F
Sbjct: 228 PPFPAGQTPPRPPLGPPGPPGPPGP-PPPGQVLPPPLAGPPNRG--DRPPPPVLFPGQPF 284
Query: 799 XXCPXLPSXXGPP 837
P P GPP
Sbjct: 285 GQPPLGPLPPGPP 297
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 32.7 bits (71), Expect = 2.3
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +1
Query: 619 PXXXLSSTXXRPXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPPPTAFQXPSXF 798
P T RP PP PP P PP G G + PPP F
Sbjct: 228 PPFPAGQTPPRPPLGPPGPPGPPGP-PPPGQVLPPPLAGPPNRG--DRPPPPVLFPGQPF 284
Query: 799 XXCPXLPSXXGPP 837
P P GPP
Sbjct: 285 GQPPLGPLPPGPP 297
>AB209431-1|BAD92668.1| 951|Homo sapiens TYRO3 protein tyrosine
kinase variant protein.
Length = 951
Score = 32.3 bits (70), Expect = 3.1
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +1
Query: 637 STXXRPXPNPPSXVXPPXP-XPPXXXXXXXXXXGTITHGXXNXPPPTAFQXPSXFXXCPX 813
ST R P PP+ + PP P PP G HG + PP A + P
Sbjct: 18 STAPRAAPAPPAALLPPAPFPPPPPRPPPSSLAGRARHGAAS--PPMALRRSMGRPGLPP 75
Query: 814 LPSXXGP 834
LP P
Sbjct: 76 LPLPPPP 82
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.9 bits (69), Expect = 4.1
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = +1
Query: 652 PXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPP---PTAFQXPSXFXXCPXLPS 822
P P PPS PP P PP G PP PTA P P PS
Sbjct: 277 PPPPPPSRGGPPPPPPPPHSSGPPPPPAR-GRGAPPPPPSRAPTAAPPPPP----PSRPS 331
Query: 823 XXGPPXXPNHRNWP 864
PP PN R +P
Sbjct: 332 VEVPPPPPN-RMYP 344
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.9 bits (69), Expect = 4.1
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = +1
Query: 652 PXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPP---PTAFQXPSXFXXCPXLPS 822
P P PPS PP P PP G PP PTA P P PS
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPAR-GRGAPPPPPSRAPTAAPPPPP----PSRPS 331
Query: 823 XXGPPXXPNHRNWP 864
PP PN R +P
Sbjct: 332 VAVPPPPPN-RMYP 344
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.9 bits (69), Expect = 4.1
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = +1
Query: 652 PXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPP---PTAFQXPSXFXXCPXLPS 822
P P PPS PP P PP G PP PTA P P PS
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPAR-GRGAPPPPPSRAPTAAPPPPP----PSRPS 331
Query: 823 XXGPPXXPNHRNWP 864
PP PN R +P
Sbjct: 332 VAVPPPPPN-RMYP 344
>AF306510-1|AAK15469.1| 500|Homo sapiens RANBPM protein.
Length = 500
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 9 GVNMNRLPGWDKHSYG 24
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.9 bits (69), Expect = 4.1
Identities = 26/74 (35%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = +1
Query: 652 PXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPP---PTAFQXPSXFXXCPXLPS 822
P P PPS PP P PP G PP PTA P P PS
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPAR-GRGAPPPPPSRAPTAAPPPPP----PSRPS 331
Query: 823 XXGPPXXPNHRNWP 864
PP PN R +P
Sbjct: 332 VAVPPPPPN-RMYP 344
>AB008515-1|BAA23216.1| 500|Homo sapiens RanBPM protein.
Length = 500
Score = 31.9 bits (69), Expect = 4.1
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 398 GVNMXXLPGWDNXSYG 445
GVNM LPGWD SYG
Sbjct: 9 GVNMNRLPGWDKHSYG 24
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.5 bits (68), Expect = 5.4
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +1
Query: 640 TXXRPXPNPPSXVXPPXPXPPXXXXXXXXXXGTITHGXXNXPPPTAFQXPSXFXXCPXLP 819
T RP PP PP P PP G G + PPP F P P
Sbjct: 272 TPPRPPLGPPGPPGPPGP-PPPGQVLPPPLAGPPNRG--DRPPPPVLFPGQPFGQPPLGP 328
Query: 820 SXXGPP 837
GPP
Sbjct: 329 LPPGPP 334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,047,844
Number of Sequences: 237096
Number of extensions: 1998830
Number of successful extensions: 13998
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12890
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14594798064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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