Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B23
(1060 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 37 0.024
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 34 0.22
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 34 0.22
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 33 0.29
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 33 0.51
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.51
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.2
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 31 2.1
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 31 2.1
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 29 4.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 4.8
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 29 6.3
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 8.3
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 8.3
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 29 8.3
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 8.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 8.3
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 29 8.3
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/77 (31%), Positives = 27/77 (35%)
Frame = +2
Query: 476 TDPXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXK 655
++ S S GG+ PP P PG A PP P G P A PP AP
Sbjct: 907 SESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPP 966
Query: 656 RNPSIXQXPTXPXGXTP 706
P P G P
Sbjct: 967 -GGGAPPLPPPPGGSAP 982
Score = 34.3 bits (75), Expect = 0.17
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +2
Query: 503 GGNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXP 682
GG+ +P PG PP P G P P A PP AP P P
Sbjct: 905 GGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAP 964
Query: 683 TXPXGXTP 706
P G P
Sbjct: 965 -PPGGGAP 971
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 585 PPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPP 719
PP A PP G APP P S PP A P PP
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPP 977
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Frame = +2
Query: 482 PXSXSXXGGNTAPPHPIPGTXARKX-------PPXPXGXXTPPXP 595
P GGN PP P PG A PP P G PP P
Sbjct: 942 PSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPP 986
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P P PP P + PP G APP P S PP P PPP
Sbjct: 945 PPPPGGNAPPPPPPPGGSAP---PPGGGAPPLPPPPGGSAPPP--PPPPPPPPPP 994
Score = 28.7 bits (61), Expect = 8.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P PP P + PP P P P
Sbjct: 956 PPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 37.1 bits (82), Expect = 0.024
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +1
Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPLXPP 954
PPP S P PPPP P P P + P P P PP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Query: 955 PXLXXTXXP 981
P L P
Sbjct: 432 PALRLACAP 440
Score = 35.9 bits (79), Expect = 0.055
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP + P P P PP P P PP P P P
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 35.5 bits (78), Expect = 0.073
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 35.1 bits (77), Expect = 0.096
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 35.1 bits (77), Expect = 0.096
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 35.1 bits (77), Expect = 0.096
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 35.1 bits (77), Expect = 0.096
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 35.1 bits (77), Expect = 0.096
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 35.1 bits (77), Expect = 0.096
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 34.7 bits (76), Expect = 0.13
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +1
Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPLXPP 954
PPP P PPPP P P P AP P P PP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 955 P 957
P
Sbjct: 430 P 430
Score = 33.1 bits (72), Expect = 0.39
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P +P PP P PP P P P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 33.1 bits (72), Expect = 0.39
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P + P P PP P P PP P P
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 33.1 bits (72), Expect = 0.39
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 872 PPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PP P P P PP P P+ PP P P P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 32.7 bits (71), Expect = 0.51
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 872 PPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PP P P P PP P P PP P P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 32.7 bits (71), Expect = 0.51
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXPXQL 994
PPP P P P PP P P PP P P P L
Sbjct: 395 PPPPP--PPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPAL 434
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P P P P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Score = 32.3 bits (70), Expect = 0.68
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P P P P PP P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 31.9 bits (69), Expect = 0.90
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P PP P P PP P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP 406
Score = 31.9 bits (69), Expect = 0.90
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P PP P P PP P P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 31.9 bits (69), Expect = 0.90
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P PP P P PP P P P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 31.9 bits (69), Expect = 0.90
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P P P P P
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P P PP P PP PP P PP A P PPP
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
PP P P + PP P PP P PP P P+ P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 698 XTP 706
P
Sbjct: 430 PPP 432
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P P + PP P PP PP P PP P PPP
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 29.5 bits (63), Expect = 4.8
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P P PP P PP PP P PP P PPP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +3
Query: 567 PXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P PP P PP PP + P PP P PPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
PP P P PP P +PP P PP P P P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 698 XTP 706
P
Sbjct: 427 PPP 429
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +1
Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPLXPP 954
PPP P PPPP P P P P P P PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP-PPPPPPPPPPPPPPPPAPPPPPP 425
Query: 955 P 957
P
Sbjct: 426 P 426
Score = 29.1 bits (62), Expect = 6.3
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
PP P P + PP P PP P PP P P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 698 XTP 706
P
Sbjct: 428 PPP 430
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P P PP P PP PP P PP P PPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P P PP P PP PP P PP P PPP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/51 (27%), Positives = 17/51 (33%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSI 670
PP P P + PP P PP P PP P P++
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPAL 434
Score = 28.7 bits (61), Expect = 8.3
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P PP P P PP P P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 28.7 bits (61), Expect = 8.3
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PP P P P PP P P P P P P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 33.9 bits (74), Expect = 0.22
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 482 PXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPP 631
P G PP P+PG A PP G PP P G V P
Sbjct: 667 PPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPPGFGGFANLVKP 716
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = +2
Query: 506 GNTAPPHPIPGTXA-----RKXPPXPXGXXTPPXPSTXXGAXXXVPP 631
G PP P PG A PP P G PP P GA PP
Sbjct: 659 GPPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.9 bits (74), Expect = 0.22
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Frame = +2
Query: 512 TAPPHPIPGTXARKXPPXPXGXXTPP-----XPSTXXGAXXXVPPXXXRAPXKRNPSIXQ 676
TAPP P P +++ PP G PP P A PP P P I
Sbjct: 324 TAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEG 383
Query: 677 XPTXPXGXTP 706
P G P
Sbjct: 384 RPPSSLGNPP 393
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 515 APPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPX 694
APP P G PP P PP P G PP + PS P
Sbjct: 296 APPPPSRGAP----PPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSM 351
Query: 695 GXTP 706
G P
Sbjct: 352 GMAP 355
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.5 bits (73), Expect = 0.29
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXP-PXXSXXPXPXP 985
PPP P P P PP P PS P P + P P P
Sbjct: 211 PPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPP 250
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P R P +P PP P PP P P P
Sbjct: 204 PPPP-----PPRPPPSPPPPPPPPSPSPPRPPPPPPPSP 237
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 33.1 bits (72), Expect = 0.39
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXP-XGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXP 691
PP P P A PP P PP P+ A PP P P+ P P
Sbjct: 52 PPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPP 110
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXX-PPHQXAXPXQXP---PPH 725
P P P P A PP APP P PP A P P PPH
Sbjct: 52 PPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPPH 111
Query: 726 LLSF 737
L F
Sbjct: 112 FLPF 115
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 32.7 bits (71), Expect = 0.51
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +2
Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAP 649
G+ PP P PG + PP P G PP P+ G + P P
Sbjct: 107 GDMGPPGP-PGPPGPQMPPGPPGLPGPPGPAGPPGTNGELGPPGDVGP 153
Score = 31.9 bits (69), Expect = 0.90
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 521 PHPIPGTXARKXPPXPXGXXTPPX-PSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
P+ +PG PP P G PP P PP AP + P P P G
Sbjct: 175 PNGLPGPNGPLGPPGPPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPG 234
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 521 PHPIPGTXARKXPPXPXGXXTPP-XPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
P+ +PG PP P G PP P PP AP + P P P G
Sbjct: 260 PNGLPGPNGILGPPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPG 319
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +2
Query: 521 PHPIPGTXARKXPPXPXGXXTPP-XPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
P+ PG PP P G PP P PP AP + P P P G
Sbjct: 345 PNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPG 404
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +2
Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPT 685
G PP +PG PP P G PP P G + P P P
Sbjct: 872 GEMGPPG-LPGPPGPASPPSPPGPPGPPGPKGPPGPNGCLGPPGDAGPAGNTGGAGCQPA 930
Query: 686 XP 691
P
Sbjct: 931 PP 932
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXPXQ 991
PPP P P P P P P PP P P Q
Sbjct: 38 PPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQ 78
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 521 PHPIPGTXARKXPPXPXGXXTPP-XPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
P+ PG PP P G PP P PP AP P P P G
Sbjct: 430 PNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPG 489
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 521 PHPIPGTXARKXPPXPXGXXTPP-XPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
P+ PG PP P G PP P PP AP P P P G
Sbjct: 515 PNGQPGPPGINGPPGPLGDVGPPGLPGPPGPQMPPGPPGLPGAPGPNGPPGINGPLGPPG 574
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAP 649
G PP +PG PP P G PP P+ G + P P
Sbjct: 702 GEMGPPG-LPGPPGPASPPSPPGPPGPPGPNGPPGPNGPLGPPGECGP 748
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 515 APPHPIPGTXARKXPPXPXGXXTPPXPSTXXG 610
+PP P PG K PP P G PP S G
Sbjct: 635 SPPGP-PGPPGPKGPPGPNGPLGPPGESGPAG 665
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +2
Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAP 649
G PP +PG PP P G PP P G + P P
Sbjct: 787 GEMGPPG-LPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPGECGP 833
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 32.7 bits (71), Expect = 0.51
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXP 979
PPP P P P PP P P PP P P
Sbjct: 149 PPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNP 185
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXP-PXXSXXPXPXP 985
PPP P P P PP P P+ P P P P P
Sbjct: 96 PPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPP 135
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 133 PPPPNAPYPPS--PNAPYPPPPNPPYPPPLYPPPPNPPP 169
Score = 30.7 bits (66), Expect = 2.1
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 555 NPRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPPH 725
NP P A PP P + PP PP P P P PP+
Sbjct: 166 NPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPY 222
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 872 PPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXP 979
PP P P P PP P P PP + P P
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPP 127
Score = 29.9 bits (64), Expect = 3.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXP 979
PPP P P P PP P P+ PP P P
Sbjct: 180 PPPPNPPYPPP--PNPPYPPPPNAPNPPPPNPPYPPP 214
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXP 979
PPP P P PP P P PP P P
Sbjct: 162 PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPP 198
Score = 29.1 bits (62), Expect = 6.3
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 555 NPRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPPH 725
NP P PP P A PP PP P PP P PPP+
Sbjct: 184 NPPYPPPP-NPPYPPPPNAPN-PPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPPPPN 238
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P PP + P P
Sbjct: 196 PPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYP 234
Score = 28.7 bits (61), Expect = 8.3
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPPH 725
P P A PP P + PP PP P PP P PP+
Sbjct: 141 PPSPNAPYPPPPNPPYPPPLYPPPP-NPPPPNAPYPPPPYPPPPNPPYPPPPNPPY 195
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/60 (28%), Positives = 19/60 (31%)
Frame = +1
Query: 640 PRPPQEKSLNXPXPHXTXWPNPXXXXXXXXXXXXXXXXXXXXXXXPPPSXSTXXPHPPPP 819
P PP N P P PNP PPP + P+PPPP
Sbjct: 183 PNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPY-----PPPPNAPNPPYPPPP 237
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P PP P P PP P P P
Sbjct: 188 PPPPNPPYPPPPNAPNPPPPNPPYP-PPPNAPNPPYPPP 225
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 896 PXRXPXTPXPPXPXXPSXPPXXSXXPXPXPXQL 994
P P P PP P P PP P P P L
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPFPPPPPPTPLHL 499
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 896 PXRXPXTPXPPXPXXPSXPPXXSXXPXPXPXQL 994
P P P PP P P PP P P P L
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTPL 497
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 896 PXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
P P P PP P P PP P P P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPP 955
PPP P P P PP P P PP
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPP 955
PPP P P P PP P P PP
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/63 (30%), Positives = 21/63 (33%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
PP +P RK P P PP VPP P NP+ PT P
Sbjct: 1050 PPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPA---HPTEPPP 1106
Query: 698 XTP 706
P
Sbjct: 1107 RQP 1109
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +3
Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
P P PP QP PP P P+ PP + A P + PPP
Sbjct: 1026 PVPPKRKASPPSAQPLPPPRKPSPPPSAVPIPP--PRKPSPPPSEPAPPPRQPPP 1078
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P P P+ PP P P P
Sbjct: 1077 PPPSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKPTPAP 1115
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXP-PXPXXPSXPPXXSXXPXPXPXQ 991
PPP P R P P P P PP + P P P Q
Sbjct: 1049 PPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQ 1090
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 31.5 bits (68), Expect = 1.2
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
PP P P T PP P PP P T G PP P + P P
Sbjct: 354 PPSPPPPTNNTPPPPPPTNKPPPPPPPT-NGPPPPPPPTNGPPPPPPPTNGPPPPPPPTN 412
Query: 698 XTPT 709
P+
Sbjct: 413 GPPS 416
Score = 29.9 bits (64), Expect = 3.6
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = +1
Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPL-XP 951
PPP + P PPPP P P P + P P P P
Sbjct: 346 PPPPPTNNPPSPPPPTN-NTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 404
Query: 952 PPXLXXTXXP 981
PP T P
Sbjct: 405 PPPPPPTNGP 414
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P +P PP P PP + P P P
Sbjct: 346 PPPP-----PTNNPPSPPPPTNNTPPPPPPTNKPPPPPP 379
Score = 29.5 bits (63), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P PP + P P P
Sbjct: 374 PPPPP---PPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P PP + P P P
Sbjct: 365 PPPPP----PTNKPPPPPPPTNGPPPPPPPTNGPPPPPP 399
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPLXPP 954
PPP T P PPPP G P P P + P P P P
Sbjct: 365 PPPPPPTNKPPPPPPPTNG----------PPPPPPPTNGPPPPPPPTNGPPPPPPPTNGP 414
Query: 955 P 957
P
Sbjct: 415 P 415
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPS----XPPXXSXXPXPXP 985
PPP P P T PP P P+ PP + P P P
Sbjct: 366 PPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPP 408
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 908 PXTPXPPXPXXPSXPPXXSXXPXPXP 985
P P PP P P PP S P P P
Sbjct: 686 PPPPPPPPPPPPPPPPQPSTPPPPPP 711
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 908 PXTPXPPXPXXPSXPPXXSXXPXPXP 985
P P PP P P PP P P P
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPPPPP 710
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 482 PXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXTPPXP 595
P + G PP P G+ PP P G PP P
Sbjct: 281 PDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPP 318
Score = 28.7 bits (61), Expect = 8.3
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 482 PXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPP 631
P G APP P P A PP P PP P GA PP
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPP-----PPPPPGDGGAPPPPPP 336
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPX----PPXPXXPSXPPXXSXXPXPXP 985
PPP P P P PP P P PP P P P
Sbjct: 293 PPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 984 GWGXGXXEXXGGXEGXXGXGGXGVXGXLXGXXXYXXGGG 868
G+G G GG G G GG G G G + GGG
Sbjct: 86 GFGGGGGFGGGGGGGFGGGGGGGFGGGGGGGGGFGGGGG 124
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 908 PXTPXPPXPXXPSXPPXXSXXPXP 979
P TP PP P P PP + P P
Sbjct: 1575 PITPPPPTPSPPQTPPPVNTPPRP 1598
>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
Length = 1063
Score = 29.5 bits (63), Expect = 4.8
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = -3
Query: 1007 GXVXGVXGXGXXVXXRXGGGXRGXXGXGAXEXGXXFXXXXXIXXGAGXXXXXXXXXXXGP 828
G G G G GGG G G G G + G G G
Sbjct: 795 GGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGDGGGFGDGGGYADGDGGGGGGGG 854
Query: 827 XXXGGGGWGXXVEXEGGG 774
GGGG G GGG
Sbjct: 855 GGGGGGGGGGGGGGGGGG 872
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.5 bits (63), Expect = 4.8
Identities = 33/132 (25%), Positives = 38/132 (28%), Gaps = 1/132 (0%)
Frame = +1
Query: 565 PXGXQXAPXPFNXXXRXXGRXPXXAPRPPQEKSLNXPXPHXTXWPNPXXXXXXXXXXXXX 744
P G + AP P + P PR P+ S P P P P
Sbjct: 90 PAGVE-APTPTPMVAQSVAPTPPPPPRAPETPS-QAPSPP----PPPTSPATRAPPPPPP 143
Query: 745 XXXXXXXXXXPPP-SXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSX 921
PPP + +T P PPPP PAP P
Sbjct: 144 IAPATGGPPPPPPIAPATGGPPPPPPIAPAATV---------PAPAVPLAAASPPPPSGG 194
Query: 922 APXPXXPLXPPP 957
P P P PPP
Sbjct: 195 PPPPPPPPPPPP 206
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 29.1 bits (62), Expect = 6.3
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +3
Query: 585 PPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
PP L P PP G PP R PQ PP P PPP
Sbjct: 212 PPGLMPPPGML---PPPGGMPPGRMPPQGLPFPP-----PGPIPPP 249
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 908 PXTPXPPXPXXPSXPPXXSXXPXPXP 985
P TP P P P+ PP P P P
Sbjct: 895 PTTPTTPKPTTPAPPPPLPLAPEPPP 920
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -2
Query: 984 GWGXGXXEXXGGXEGXXGXGGXGVXGXLXGXXXYXXGGG 868
G+G G G G G GG G G G Y GGG
Sbjct: 175 GYGGGGYGGGGHGGGGYGGGGYGGGGGGYGGSGYGGGGG 213
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.7 bits (61), Expect = 8.3
Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Frame = +2
Query: 476 TDPXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXK 655
T P S G TAP PG+ A G + P+ +PP AP
Sbjct: 443 TTPQSVIPPGKTTAPTTKPPGSPAGSTQGPTDGVLSAKPPTKKTTPQSMIPPGKPTAPTP 502
Query: 656 RNP----SIXQXPT 685
+ P + Q PT
Sbjct: 503 KPPGSPVGVTQGPT 516
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.7 bits (61), Expect = 8.3
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
PPP P + P P PP P PP P P P
Sbjct: 1254 PPPPGMRPMPPQPPFMPPPPR-MQPPGPPGPPGPPGPQP 1291
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.7 bits (61), Expect = 8.3
Identities = 32/140 (22%), Positives = 35/140 (25%), Gaps = 7/140 (5%)
Frame = +1
Query: 559 PXPXGXQXAPXPFNXXXRXXGRXPXX--APRPPQEKSLNXPXPHXTXWPNPXXXXXXXXX 732
P P + P P G P AP PP+ S N P P P
Sbjct: 241 PAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPP-----PTRGPPSNSFTT 295
Query: 733 XXXXXXXXXXXXXXPPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXK--- 903
PPP + P PPP P P I
Sbjct: 296 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRS 355
Query: 904 --XXPXSXAPXPXXPLXPPP 957
P AP P PPP
Sbjct: 356 APPPPPGRAPQPLGGPPPPP 375
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.7 bits (61), Expect = 8.3
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Frame = +2
Query: 509 NTAPPHPIPGTXARKXPPXPXGXXTPPXPST-XXGAXXXVPPXXXR---APXKRNPS-IX 673
+T P P P A PP P TPP P T +PP P NPS
Sbjct: 183 STIPTPPTP--PAPPSPPIPTAPPTPPMPETPLPPGSPHIPPAPLHPHIPPAPPNPSKAI 240
Query: 674 QXPTXPXGXTP 706
P P TP
Sbjct: 241 ATPNPPMPETP 251
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 512 TAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGA 613
+ PP P PG PP P PP P G+
Sbjct: 193 SVPPPPPPGPGGIPPPPPPIRGGVPPPPPMGGGS 226
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXG 610
PP P PG PP P PP P+ G
Sbjct: 199 PPPPPPGFPGGAPPPPPPPFGAPPPPALNGG 229
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.7 bits (61), Expect = 8.3
Identities = 32/140 (22%), Positives = 35/140 (25%), Gaps = 7/140 (5%)
Frame = +1
Query: 559 PXPXGXQXAPXPFNXXXRXXGRXPXX--APRPPQEKSLNXPXPHXTXWPNPXXXXXXXXX 732
P P + P P G P AP PP+ S N P P P
Sbjct: 153 PAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPP-----PTRGPPSNSFTT 207
Query: 733 XXXXXXXXXXXXXXPPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXK--- 903
PPP + P PPP P P I
Sbjct: 208 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRS 267
Query: 904 --XXPXSXAPXPXXPLXPPP 957
P AP P PPP
Sbjct: 268 APPPPPGRAPQPLGGPPPPP 287
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 908 PXTPXPPXPXXPSXPPXXSXXPXP 979
P P PP P PS PP P P
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPPPPPP 1183
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 28.7 bits (61), Expect = 8.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 917 PXPPXPXXPSXPPXXSXXPXPXP 985
P PP P P+ PP + P P P
Sbjct: 223 PTPPPPAAPAPPPPPAAAPPPPP 245
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 908 PXTPXPPXPXXPSXPPXXSXXPXPXP 985
P TP PP P P P P P P
Sbjct: 340 PTTPQPPTPTTPKTHPQLGPPPPPPP 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,117,064
Number of Sequences: 59808
Number of extensions: 183912
Number of successful extensions: 2042
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3189638717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -