Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B23
         (1060 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   5.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = +2

Query: 509 NTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAP 649
           N  PPH   G   R     P G   PP P    GA   +PP     P
Sbjct: 509 NDGPPHGA-GYDGRDLTGGPLG---PPPPPPPGGAVLNIPPQFLPPP 551


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 20/91 (21%), Positives = 22/91 (24%)
 Frame = +1

Query: 559 PXPXGXQXAPXPFNXXXRXXGRXPXXAPRPPQEKSLNXPXPHXTXWPNPXXXXXXXXXXX 738
           P P G      P        G  P   PRPP  + +  P       P P           
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPP--MMGQPPPIRPPNPMGGPR 276

Query: 739 XXXXXXXXXXXXPPPSXSTXXPHPPPPXXXG 831
                         PS     P PP P   G
Sbjct: 277 PQISPQNSNLSGGMPSGMVGPPRPPMPMQGG 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,559
Number of Sequences: 2352
Number of extensions: 5271
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 117985413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)