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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B23
         (1060 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    33   0.34 
AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical ...    32   0.79 
Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical pr...    31   1.8  
V00147-1|CAA23463.1|  296|Caenorhabditis elegans protein ( Caeno...    31   1.8  
J01047-1|AAA27988.1|  296|Caenorhabditis elegans protein ( C.ele...    31   1.8  
Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical pr...    30   2.4  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   3.2  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   3.2  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    30   3.2  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   3.2  
AF040642-7|AAB94952.1|  329|Caenorhabditis elegans Collagen prot...    30   3.2  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   4.2  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   4.2  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   4.2  
Z95559-1|CAB08999.1|  289|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical p...    29   5.6  
U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    29   5.6  
U53155-5|AAC48270.1|  303|Caenorhabditis elegans Collagen protei...    29   7.4  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   7.4  
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    29   7.4  
AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    29   7.4  
AB072926-1|BAB69889.1|  303|Caenorhabditis elegans collagen prot...    29   7.4  
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U58736-1|AAB00598.1|  302|Caenorhabditis elegans Dumpy : shorter...    28   9.8  
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    28   9.8  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +2

Query: 482 PXSXSXXGGNTAPPHP---IPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPX 652
           P   S  GG++ PP P   +P T   + PP      TPP P          PP    +P 
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRR-------PPRTPPSPE 179

Query: 653 KRNP 664
            RNP
Sbjct: 180 PRNP 183



 Score = 28.7 bits (61), Expect = 7.4
 Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
 Frame = +3

Query: 558 PRXPXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXX-PPHQXAXPXQXPPPHLLS 734
           P  P     PP   P        PP     P R  P      PP     P   PPP L S
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNS 200



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
 Frame = +2

Query: 518 PPHPIP-----GTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPS 667
           PP P P     G  +   PP P    TPP  S         PP   R P +  PS
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPS 177


>AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical
           protein T22D1.2 protein.
          Length = 302

 Score = 31.9 bits (69), Expect = 0.79
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 515 APPHPIPGTXARKXPPXPXGXXTPPXPST 601
           AP   +  T +R+ PP P G  TPP P T
Sbjct: 20  APRFSVGETASRRPPPPPKGTGTPPPPPT 48



 Score = 30.7 bits (66), Expect = 1.8
 Identities = 19/61 (31%), Positives = 21/61 (34%)
 Frame = +2

Query: 536 GTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXGXTPTXX 715
           G  +R+ PP P G  TPP P T             R P    P     PT P    P   
Sbjct: 183 GNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPP-PPKGTGSPTPPPTGEPQDL 241

Query: 716 S 718
           S
Sbjct: 242 S 242



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 16/54 (29%), Positives = 18/54 (33%)
 Frame = +2

Query: 536 GTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           G  +R+ PP P G  TPP P T             R P          P  P G
Sbjct: 90  GNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 143



 Score = 29.9 bits (64), Expect = 3.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 536 GTXARKXPPXPXGXXTPPXPST 601
           G  +R+ PP P G  TPP P T
Sbjct: 58  GNASRRPPPPPKGTGTPPPPPT 79



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 15/54 (27%), Positives = 18/54 (33%)
 Frame = +2

Query: 536 GTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           G  +R+ PP P G  +PP P T             R P          P  P G
Sbjct: 152 GNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTG 205



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
 Frame = +2

Query: 482 PXSXSXXGGNTAPPHPIP------GTXARKXPPXPXGXXTPPXPST 601
           P      G  T PP   P      G  +R+ PP P G  +PP P T
Sbjct: 221 PPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPT 266



 Score = 28.7 bits (61), Expect = 7.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 536 GTXARKXPPXPXGXXTPPXPS 598
           G  +R+ PP P G  TPP P+
Sbjct: 276 GNASRRPPPPPKGTGTPPPPT 296


>Z74472-4|CAA98942.1|  301|Caenorhabditis elegans Hypothetical
           protein F23H12.4 protein.
          Length = 301

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/55 (29%), Positives = 20/55 (36%)
 Frame = +2

Query: 533 PGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           PG+   + PP P G    P P+   G      P    AP +   S    P  P G
Sbjct: 182 PGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPG 236


>V00147-1|CAA23463.1|  296|Caenorhabditis elegans protein (
           Caenorhabditis elegansgene Col-1 coding for a collagen.
           ).
          Length = 296

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/55 (29%), Positives = 20/55 (36%)
 Frame = +2

Query: 533 PGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           PG+   + PP P G    P P+   G      P    AP +   S    P  P G
Sbjct: 177 PGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPG 231



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +2

Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAP 649
           G   PP P PG      PP P G    P P    GA     P     P
Sbjct: 222 GPPGPPGP-PGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268


>J01047-1|AAA27988.1|  296|Caenorhabditis elegans protein (
           C.elegans (nematode)collagen 1 (col-1) gene, complete
           cds. ).
          Length = 296

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 16/55 (29%), Positives = 20/55 (36%)
 Frame = +2

Query: 533 PGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           PG+   + PP P G    P P+   G      P    AP +   S    P  P G
Sbjct: 177 PGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPG 231



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +2

Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAP 649
           G   PP P PG      PP P G    P P    GA     P     P
Sbjct: 222 GPPGPPGP-PGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGP 268


>Z81124-1|CAB03369.1|  312|Caenorhabditis elegans Hypothetical
           protein T21B4.2 protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/53 (26%), Positives = 18/53 (33%)
 Frame = +2

Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNP 664
           GN   P  +     ++ PP P G   PP P+   G      P     P    P
Sbjct: 223 GNPGAPGAVTEVPGQQGPPGPPGPAGPPGPAGNAGQAGYAQPGPAGPPGDAGP 275


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/61 (26%), Positives = 17/61 (27%)
 Frame = +1

Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPLXPP 954
           PPP        PPPP   G            P P  +        P    P    P  PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774

Query: 955 P 957
           P
Sbjct: 775 P 775



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
 Frame = +2

Query: 482 PXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXT--PPXPSTXXGAXXXVPPXXXRAPXK 655
           P       G   PP P PG      PP P G     PP P          P      P K
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 807

Query: 656 RNPSI 670
           + P +
Sbjct: 808 KVPKV 812



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = +3

Query: 567 PXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
           P     P  L P        PP G  PP    P     PP     P   PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/61 (26%), Positives = 17/61 (27%)
 Frame = +1

Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPLXPP 954
           PPP        PPPP   G            P P  +        P    P    P  PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 774

Query: 955 P 957
           P
Sbjct: 775 P 775



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
 Frame = +2

Query: 482 PXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXT--PPXPSTXXGAXXXVPPXXXRAPXK 655
           P       G   PP P PG      PP P G     PP P          P      P K
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 807

Query: 656 RNPSI 670
           + P +
Sbjct: 808 KVPKV 812



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = +3

Query: 567 PXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
           P     P  L P        PP G  PP    P     PP     P   PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 22/85 (25%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
 Frame = +2

Query: 476  TDPXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVP----PXXXR 643
            T   + S   G   PP P+P    +  P    G  +P  PS         P    P    
Sbjct: 913  TTSSTESFTRGGFIPPIPVPNPIPKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPS 972

Query: 644  APXKRNPSIXQXPTXPXGXTPTXXS 718
             P K  PS    P+ P   +P   S
Sbjct: 973  DPNKPGPSGPNGPSDPNKPSPNGPS 997


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 16/61 (26%), Positives = 17/61 (27%)
 Frame = +1

Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXPLXPP 954
           PPP        PPPP   G            P P  +        P    P    P  PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP 357

Query: 955 P 957
           P
Sbjct: 358 P 358



 Score = 29.5 bits (63), Expect = 4.2
 Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
 Frame = +2

Query: 482 PXSXSXXGGNTAPPHPIPGTXARKXPPXPXGXXT--PPXPSTXXGAXXXVPPXXXRAPXK 655
           P       G   PP P PG      PP P G     PP P          P      P K
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPK 390

Query: 656 RNPSI 670
           + P +
Sbjct: 391 KVPKV 395



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = +3

Query: 567 PXAXXRPPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
           P     P  L P        PP G  PP    P     PP     P   PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360


>AF040642-7|AAB94952.1|  329|Caenorhabditis elegans Collagen protein
           68 protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 3/75 (4%)
 Frame = +2

Query: 482 PXSXSXXGGNTAPPHP-IPGTXARKXPPXPXGXXTPPXPSTXXG--AXXXVPPXXXRAPX 652
           P      G N  P  P  PG  A   PP P G   PP      G      VP      P 
Sbjct: 194 PGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPG 253

Query: 653 KRNPSIXQXPTXPXG 697
              P+    P  P G
Sbjct: 254 TPGPAGPPGPPGPIG 268


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = +2

Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPT 685
           G+  PP P  G+      P P    +PP   T        PP   R   +R+P     PT
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPPRQKRQAPERSPPTGSPPT 351

Query: 686 --XPXGXTP 706
              P G  P
Sbjct: 352 GSPPTGRPP 360



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PPP +    P     +P PP P   S PP  +  P P P
Sbjct: 264 PPPPRTGSPPPPPTGSP-PPPPAGGSPPPPRAGSPPPPP 301



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PPP      P     +P PP P   S PP  +  P P P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPP-PAAGSPPPPRTGSPPPPP 276



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +2

Query: 872 PPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PP      P   P    PP P   S PP  +  P P P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = +2

Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPT 685
           G+  PP P  G+      P P    +PP   T        PP   R   +R+P     PT
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPPRQKRQAPERSPPTGSPPT 372

Query: 686 --XPXGXTP 706
              P G  P
Sbjct: 373 GSPPTGRPP 381



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PPP +    P     +P PP P   S PP  +  P P P
Sbjct: 285 PPPPRTGSPPPPPTGSP-PPPPAGGSPPPPRAGSPPPPP 322



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PPP      P     +P PP P   S PP  +  P P P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPP-PAAGSPPPPRTGSPPPPP 297



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +2

Query: 872 PPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PP      P   P    PP P   S PP  +  P P P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = +2

Query: 506 GNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPT 685
           G+  PP P  G+      P P    +PP   T        PP   R   +R+P     PT
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPPRQKRQAPERSPPTGSPPT 357

Query: 686 --XPXGXTP 706
              P G  P
Sbjct: 358 GSPPTGRPP 366



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PPP +    P     +P PP P   S PP  +  P P P
Sbjct: 270 PPPPRTGSPPPPPTGSP-PPPPAGGSPPPPRAGSPPPPP 307



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PPP      P     +P PP P   S PP  +  P P P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPP-PAAGSPPPPRTGSPPPPP 282



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +2

Query: 872 PPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXPXP 985
           PP      P   P    PP P   S PP  +  P P P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290


>Z95559-1|CAB08999.1|  289|Caenorhabditis elegans Hypothetical
           protein Y41E3.2 protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
 Frame = +2

Query: 482 PXSXSXXGGNTAPPHPIP-GTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKR 658
           P      G N  P    P G  A    P P G   PP P    GA     P    +P K 
Sbjct: 146 PGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGPPGPPGQAGA-----PGEPGSPAKS 200

Query: 659 NPSIXQXPTXP 691
            P++   P  P
Sbjct: 201 EPAVPGPPGPP 211


>Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical
           protein F47B8.14 protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +2

Query: 503 GGNTAPPHPIPGTXARKXPPXPXGXXTPPXPSTXXG 610
           GG+ APP P P   A    P P     P  P+   G
Sbjct: 36  GGDAAPPPPPPADAAPAPAPAPEPEAAPAAPAADAG 71


>U27312-9|AAA68252.1|  239|Caenorhabditis elegans Hypothetical
           protein F26A1.11 protein.
          Length = 239

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +2

Query: 902 RXPXTPXPPXPXXPSXPPXXSXXPXPXPXQ 991
           R P  P PP P  P  PP       P P Q
Sbjct: 32  RPPRPPRPPSPSRPQRPPPSRPQRPPPPRQ 61


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
 Frame = +2

Query: 869  PPPXK*XXXPXRXPXTPXPPXPXXP---SXPPXXSXXPXPXPXQLXS 1000
            PPP      P     TP PP P  P   S  P     P P P  L S
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFS 1384


>U53155-5|AAC48270.1|  303|Caenorhabditis elegans Collagen protein
           43 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/55 (27%), Positives = 18/55 (32%)
 Frame = +2

Query: 533 PGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           PG    + PP P G    P P    G      P    AP +   +    P  P G
Sbjct: 184 PGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPG 238


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +2

Query: 869 PPPXK*XXXPXRXPXTPXPPXPXXPSXPPXXSXXPXP 979
           PPP      P   P    PP P  PS  P  S  P P
Sbjct: 58  PPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAP 94



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +3

Query: 585 PPXLQPXXAXXWXXPPXGXAPPXREIPQXSXXPPHQXAXPXQXPPP 722
           PP   P        PP    PP    PQ    PP     P   PPP
Sbjct: 27  PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
           protein 1, isoform d protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 984 GWGXGXXEXXGGXEGXXGXGGXGVXGXLXGXXXYXXGGG 868
           G+G G     GG  G  G GG    G L G      GGG
Sbjct: 65  GFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGG 103


>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 984 GWGXGXXEXXGGXEGXXGXGGXGVXGXLXGXXXYXXGGG 868
           G+G G     GG  G  G GG G  G   G      GGG
Sbjct: 131 GYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGG 169


>AB072926-1|BAB69889.1|  303|Caenorhabditis elegans collagen
           protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 15/55 (27%), Positives = 18/55 (32%)
 Frame = +2

Query: 533 PGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           PG    + PP P G    P P    G      P    AP +   +    P  P G
Sbjct: 184 PGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGPPGPPG 238


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
 Frame = +1

Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXP--LX 948
           PPPS     P PPPP                P P           P    P    P  + 
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348

Query: 949 PPP 957
           PPP
Sbjct: 349 PPP 351


>U58736-1|AAB00598.1|  302|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 3 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 19/60 (31%), Positives = 22/60 (36%)
 Frame = +2

Query: 518 PPHPIPGTXARKXPPXPXGXXTPPXPSTXXGAXXXVPPXXXRAPXKRNPSIXQXPTXPXG 697
           PP P PG   R   P   G    P P    GA    PP   + P ++ P     P  P G
Sbjct: 112 PPGP-PGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPP--PKPPCQKCPPGPPGPAGPPG 168



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +2

Query: 521 PHPIPGTXARKXPPXPXGXXTPPXPSTXXG 610
           P P P    +K PP P G   PP P    G
Sbjct: 145 PGPPPKPPCQKCPPGPPGPAGPPGPKGLPG 174


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 17/63 (26%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
 Frame = +1

Query: 775 PPPSXSTXXPHPPPPXXXGXXXXXXXXXXXXPAPXXIXXXXXKXXPXSXAPXPXXP--LX 948
           PPPS     P PPPP                P P           P    P    P  + 
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358

Query: 949 PPP 957
           PPP
Sbjct: 359 PPP 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,825,578
Number of Sequences: 27780
Number of extensions: 167220
Number of successful extensions: 1698
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2824804260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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