Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B22
         (971 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.38 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.3  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = +3

Query: 789 LXXPPXXPPPXXXPPPPPXPXXXXPPXPXGXXRXPXXPPXPXXPXPPXXPP 941
           L  P   P P    P P  P     P        P  P  P  P PP  PP
Sbjct: 146 LTMPKYEPNPSIIDPGPALP-----PTGFLCNNYPPLPQVPPLPLPPIFPP 191



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +2

Query: 722 PPPPXXAXHPPPXPXXXXPPPPPSXPPXXXPP 817
           PP      + PP P     P PP  PP    P
Sbjct: 165 PPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196



 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 783 PPLXXPPXXPPPXXXP 830
           PPL  PP  PP    P
Sbjct: 181 PPLPLPPIFPPTMINP 196


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +1

Query: 877 GXXAXPXPXPXXPXPXPXPXPPXXPXPPP 963
           G    P P      P P P  P  P P P
Sbjct: 66  GWQVTPLPSDGTTSPEPDPEIPVAPEPAP 94


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +3

Query: 726 PPPXXPXTPPPXXPXXGXPPPLXXP 800
           PPP  P   PP  P    P  +  P
Sbjct: 736 PPPPHPHHQPPRNPVGTNPHDINNP 760



 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 831 PPPPXPXXXXPPXPXG 878
           PPPP P    P  P G
Sbjct: 736 PPPPHPHHQPPRNPVG 751



 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 722 PPPPXXAXHPPPXPXXXXP 778
           PPPP     PP  P    P
Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +3

Query: 726 PPPXXPXTPPPXXPXXGXPPPLXXP 800
           PPP  P   PP  P    P  +  P
Sbjct: 628 PPPPHPHHQPPRNPVGTNPHDINNP 652



 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 831 PPPPXPXXXXPPXPXG 878
           PPPP P    P  P G
Sbjct: 628 PPPPHPHHQPPRNPVG 643



 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 722 PPPPXXAXHPPPXPXXXXP 778
           PPPP     PP  P    P
Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 13/46 (28%), Positives = 14/46 (30%)
 Frame = +1

Query: 664 GGXPXPPPTTXXXXXXFPAXPPPPXGXXPPPXPXPXXAXPPPFXPP 801
           GG   P P +           PP     PP    P    P P  PP
Sbjct: 40  GGAVQPDPGSCDPSVGLRQGIPPHHYGGPPSGGQPPQGMPYPRFPP 85


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 539 FTYFQFYNITVYH*ENFGRY 480
           F+    Y  T+YH ENF  Y
Sbjct: 213 FSAASSYTNTIYHQENFENY 232


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 10/33 (30%), Positives = 11/33 (33%)
 Frame = +1

Query: 658  PXGGXPXPPPTTXXXXXXFPAXPPPPXGXXPPP 756
            P  G   PPP         P+ P  P    P P
Sbjct: 1080 PTQGTTIPPPAVVMPEVDKPSQPCEPGQYVPDP 1112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,164
Number of Sequences: 336
Number of extensions: 7148
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27513178
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)