Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B21
         (930 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   7.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   7.8  

>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 201 HSRYIDPTRKSSIKNSLG 254
           +SRYI   RK+ + NSLG
Sbjct: 177 YSRYITIRRKAELANSLG 194


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 408 PKFNIVITFHSGFSETKIFTIAVFSSNKR*IILRS 304
           PK  ++I+   G   +  F+  V S+N+R   +RS
Sbjct: 246 PKLKVLISVGEGRDGSHRFSTMVSSANRRREFIRS 280


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 432 KRRCHSKCCCRNCVHQSFT 488
           KR  + K CC+NC    ++
Sbjct: 789 KRIYNEKQCCKNCARVDYS 807



 Score = 21.8 bits (44), Expect = 7.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 239 DTTFTSWVDISTVRST 192
           +TTF + VD+ST R T
Sbjct: 449 NTTFITLVDVSTKRRT 464


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = +1

Query: 295 VEEAAKNNLAFIGAKDSNSKDLRLAETTVKGYDYVKFWRVELKE 426
           V  A K N  ++G +D  S  +++     KGY     W +++ +
Sbjct: 333 VPYAYKGN-QWVGYEDPESVQIKMDWIKSKGYGGAMTWAIDMDD 375


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = -2

Query: 275 TGDLPLFSKTIFDTTFTSWVDISTVRSTFFNFISLDIVSTLALRVCIVKKQYEKKRKL 102
           T  L  F   IF    + ++  +T   T + FISL ++    + VC       ++ KL
Sbjct: 291 TSFLNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLVSVCFYGSWINEESKL 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,263
Number of Sequences: 336
Number of extensions: 3973
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)