Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B21
(930 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54864| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.25
SB_11498| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 30 3.1
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 26 4.5
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 5.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 24 8.4
>SB_54864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 60.5 bits (140), Expect = 2e-09
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = +1
Query: 136 IQTLSASVDTISSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSPVKHFLFAVEEAAKN 315
I TL+ I+ D+ L R +D+S+QLVKV + I L+N G PV F FAV+ + +
Sbjct: 16 IFTLTPVDADINHDLVLSKASRKIDLSSQLVKVSTSITLDNGGNQPVDSFHFAVDPSVAD 75
Query: 316 NLAFIGAKDSNSKDLRLAE 372
NLA + A S D+ + E
Sbjct: 76 NLALLSASSGGSVDVSVEE 94
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +1
Query: 433 NAGATVNVVVETVFTKALQPYPTAITQQEDXLVKYVGNLYTYS 561
++G +V+V VE VF A++P+P + Q + V + GN YT++
Sbjct: 83 SSGGSVDVSVEEVFAHAMKPFPAKVAQSDKHQVLFTGNHYTFA 125
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.5 bits (73), Expect = 0.25
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 561 PGTIPPHXKPVXF*IPXLXNPXPX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKP 740
P PP P P P P P PQ P PPPP P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 741 XPP 749
PP
Sbjct: 425 PPP 427
Score = 32.3 bits (70), Expect = 0.57
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +3
Query: 561 PGTIPPHXKPVXF*IPXLXNPXPX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKP 740
P PP P P +P P P P P PPPP P P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 741 XPP 749
PP
Sbjct: 429 PPP 431
Score = 31.5 bits (68), Expect = 1.0
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = +3
Query: 561 PGTIPPHXKPVXF*IPXLXNPXPX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKP 740
P PP P P P P P P P PPPP P P P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 741 XPPFLTXXXXXKRXTXXXPL 800
PP L R P+
Sbjct: 430 PPPALRLACAPPRLRFTSPV 449
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 618 NPXPX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKPXPP 749
+P P P P P PPPP P P + P P PP
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 844 PYXXXPPPRAPXXXXSPXPPXPPXRXPA 927
P PPP P P PP PP PA
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPA 419
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 844 PYXXXPPPRAPXXXXSPXPPXPPXRXPA 927
P PPP P P PP PP PA
Sbjct: 406 PPPPPPPPPPPPPAPPPPPPPPPPPPPA 433
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 844 PYXXXPPPRAPXXXXSPXPPXPPXRXP 924
P PPP +P P PP PP P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPP 405
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 844 PYXXXPPPRAPXXXXSPXPPXPPXRXP 924
P PPP+ P P PP PP P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPP 412
>SB_11498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 250 LENSGKSPVKHFLFAVEEAAKNNLAFIGAKDSNSKDLRLAETTVKGY---DYVKFWRVEL 420
LEN G PVKH AK L AKD N K L + ++G + ++ +R EL
Sbjct: 8 LENLGAKPVKHVTSQKHLRAKAILEKDKAKDQNIKTLLSKHSNIQGSTLPEEMRLYRYEL 67
Query: 421 KE-PLNAG 441
E L AG
Sbjct: 68 VEIMLKAG 75
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 1.3
Identities = 30/117 (25%), Positives = 33/117 (28%), Gaps = 3/117 (2%)
Frame = +3
Query: 561 PGTIPPHXKPVXF*IPXLXN---PXPX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSL 731
P PP+ P P N P P P P P PPPP P P +
Sbjct: 126 PPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNP 185
Query: 732 XKPXPPFLTXXXXXKRXTXXXPLXG*YCPXNXVXXX*PXXGXPPPKGPXXXXFPXPP 902
P PP P P N P PPP +P PP
Sbjct: 186 PYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNA-----PNPPYPPPPNAPNPPYPPPP 237
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 796 PXGGNIAXXTXSXKXDPYXXXPPPRAPXXXXSPXPPXPP 912
P GG + P PPP P P PP PP
Sbjct: 423 PPGGGVPSHPPPLPQPPPSIIPPPTTPLPQTVPTPPRPP 461
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 645 PQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKPXPP 749
P P + PPPP P P E P SL P PP
Sbjct: 364 PPPPPPPVGGPPPP---PPPIEGRPPSSLGNPPPP 395
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 26.2 bits (55), Expect(2) = 7.5
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 7/66 (10%)
Frame = +3
Query: 573 PPHXKPVXF*IPXLXNPXPX*SPXPQLXXPLIFXPPP----PXC---XPXPXEXXPXXSL 731
PP PV P P P P L L PPP P C P P P +
Sbjct: 679 PPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAG 738
Query: 732 XKPXPP 749
P PP
Sbjct: 739 LPPPPP 744
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 12/41 (29%), Positives = 14/41 (34%)
Frame = +3
Query: 627 PX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKPXPP 749
P P P + + PPPP P P P PP
Sbjct: 678 PPPPPLPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPP 718
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 843 PXXGXPPPKGPXXXXFPXPPXSSXXG 920
P PPP P P PP S G
Sbjct: 710 PMPPPPPPPPPGCAGLPPPPPSPQPG 735
Score = 20.6 bits (41), Expect(2) = 7.5
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +3
Query: 858 PPPKGPXXXXFPXPP 902
PPP P P PP
Sbjct: 743 PPPPPPGCAGLPPPP 757
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 841 DPYXXXPPPRAPXXXXSPXPPXPPXRXP 924
D PPP P SP PP PP P
Sbjct: 1154 DQIPPPPPPPPPPPPSSPSPPPPPPPPP 1181
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 844 PYXXXPPPRAPXXXXSPXPPXPPXRXP 924
P PPP P SP PP PP P
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPPP 1183
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 627 PX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKPXPP 749
P P P PL PPPP P + P P PP
Sbjct: 920 PPPPPPPGGNAPL---PPPPPGGSAPSQPPPPGGNAPPPPP 957
Score = 23.4 bits (48), Expect(2) = 5.8
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 843 PXXGXPPPKGPXXXXFPXPPXSSXXGP 923
P G PP G P PP S P
Sbjct: 958 PPGGSAPPPGGGAPPLPPPPGGSAPPP 984
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 23.8 bits (49), Expect(2) = 8.4
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +3
Query: 843 PXXGXPPPKGPXXXXFPXPPXSSXXGP 923
P G PPP P P PP P
Sbjct: 190 PPSGGPPPPPPPPPPPPPPPILELAAP 216
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +3
Query: 573 PPHXKPVXF*IPXLXNPXPX*SPXPQLXXPLIFXPPPPXCXPXPXEXXPXXSLXKPXPP 749
PP P+ P P P P P PPPP P P L PP
Sbjct: 138 PPPPPPIA---PATGGPPPPPPIAPATGGP----PPPPPIAPAATVPAPAVPLAAASPP 189
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,146,751
Number of Sequences: 59808
Number of extensions: 470819
Number of successful extensions: 1943
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1702
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2705204627
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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