Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B20
(1133 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 40 0.005
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.020
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.034
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 36 0.046
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 35 0.14
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 34 0.18
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.24
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.24
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 33 0.42
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 33 0.42
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 33 0.56
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.74
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 32 0.74
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 31 1.3
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 1.7
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 1.7
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 30 3.0
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 4.0
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.0
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 5.2
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 6.9
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 6.9
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 29 6.9
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.1
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 39.5 bits (88), Expect = 0.005
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXP 963
P P PPP PP PP+ P P+ P P PP P P P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 35.5 bits (78), Expect = 0.080
Identities = 21/84 (25%), Positives = 25/84 (29%)
Frame = +1
Query: 670 NXXSXXASLAPGXXLXGPXXXXXXRNXPXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXP 849
N + ++ G + P P P P P PPP PP P
Sbjct: 349 NPRAIVTDISAGINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Query: 850 PNXLPXPRXPLXXXPXXXXPPXRP 921
P P P P P PP P
Sbjct: 409 PPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 35.5 bits (78), Expect = 0.080
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +1
Query: 751 PXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXP 930
P P+ P P PPP PP PP P P P P PP P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 34.3 bits (75), Expect = 0.18
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 804 IHSXXPAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXP 932
I+ P PP PP PPP P P PP P P
Sbjct: 361 INMSPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTV 948
P P + P P PP PP P P P P PP P P P +
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPAL 434
Score = 33.9 bits (74), Expect = 0.24
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 810 SXXPAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXP 932
S P PP PP PPP P P PP P P
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPP 404
Score = 33.5 bits (73), Expect = 0.32
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
PPP PP PP P P P P PP +P P P
Sbjct: 365 PPP--PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP 402
Score = 33.5 bits (73), Expect = 0.32
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXPXSQSXXXXXXRXP 1002
PPP PP P P P P P PP P P P P + P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 1003 RP 1008
P
Sbjct: 429 PP 430
Score = 33.5 bits (73), Expect = 0.32
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
P P PPP PP PP P P P P PP P P P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPP---PPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 33.5 bits (73), Expect = 0.32
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
P P PP PP PP P P P P PP P P P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 33.1 bits (72), Expect = 0.42
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
P P PPP P PP P P P P PP P P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 37.5 bits (83), Expect = 0.020
Identities = 26/104 (25%), Positives = 28/104 (26%), Gaps = 2/104 (1%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPX--SPXXXPXAXNRHHXXAXLAIXXLXRX 992
P PP PP PP P P PP P P N +
Sbjct: 128 PNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPY 187
Query: 993 PXSSXRXTXPPPSXXXPPTXXXXCPPXTLVSXHXXPPPXKXHXP 1124
P PPP+ PP PP PPP P
Sbjct: 188 PPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNP 231
Score = 36.7 bits (81), Expect = 0.034
Identities = 27/96 (28%), Positives = 31/96 (32%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXLAIXXLXRXPX 998
P PP PP PPP P P PP +P P N + A P
Sbjct: 90 PNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAP--YPPPPNPPYPPPPNA-----PYPP 142
Query: 999 SSXRXTXPPPSXXXPPTXXXXCPPXTLVSXHXXPPP 1106
S PPP+ PP P + PPP
Sbjct: 143 SPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPP 178
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +1
Query: 745 NXPXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPX 924
N P P P P PPP P PP P P P P PP P
Sbjct: 171 NAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPN 230
Query: 925 XPXXXP 942
P P
Sbjct: 231 PPYPPP 236
Score = 33.1 bits (72), Expect = 0.42
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXP 963
P P PPP PP P P P P P PP P P P P
Sbjct: 165 PNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPP--PPNPPYPPPPNAPNP 220
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXP 930
PPP PP P P P P P PP P P
Sbjct: 162 PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPP 197
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXPXS 969
P P PPP P PP P P P P PP P P P P +
Sbjct: 115 PYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPP--PLYPPPPNPPPPNA 172
Query: 970 QSXXXXXXRXPRP 1008
P P
Sbjct: 173 PYPPPPYPPPPNP 185
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXP-PXRPXXPXXXPTVTTXXPX 966
P P PPP P PP P P P P P P P P P P
Sbjct: 139 PYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPP 198
Query: 967 SQSXXXXXXRXPRP 1008
+ P P
Sbjct: 199 PNAPNPPPPNPPYP 212
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 745 NXPXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRP 921
N P P + P P PP PP P P P P PP P
Sbjct: 166 NPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPP 224
Score = 28.7 bits (61), Expect = 9.1
Identities = 25/111 (22%), Positives = 29/111 (26%)
Frame = +2
Query: 767 PPPXTXSCHXXGDPLSXTXPPXXXPQXXQTXSPXXXXXSXXXXPXXXPPXAXPXPXXXXX 946
PPP +P PP P +P + P PP P P
Sbjct: 117 PPPPNAPYPPPPNP--PYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPY 174
Query: 947 XXXXXXXXNXXPXPXAAFLXPLXXPAPXXXXPPNPXXPLSAXXPCLXTPXP 1099
P P + P P P PNP P P P P
Sbjct: 175 PPPP-----YPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNP 220
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 36.7 bits (81), Expect = 0.034
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +1
Query: 766 PTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXR----PXXPX 933
P+ +P P ++ + PPP PP PP P P+ P PP + P P
Sbjct: 667 PSIPIQILPIPIQTMVPPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPA 726
Query: 934 XXPTVTT 954
P+ T+
Sbjct: 727 GSPSGTS 733
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 36.3 bits (80), Expect = 0.046
Identities = 29/103 (28%), Positives = 34/103 (33%), Gaps = 1/103 (0%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXLAIXXLXRXPX 998
P+PP PP+ + PP P P P P P + R+ L R P
Sbjct: 259 PSPPRYPPSPLRYPP---IPPRYPPSLIRYPTLPPRYPPSPPRYPPSPPRYPPSLHRYPQ 315
Query: 999 SSXRXTXPPPSXXXPPTXXXXCP-PXTLVSXHXXPPPXKXHXP 1124
S R PP PP P P S H PP P
Sbjct: 316 SPLR--YPPSPIRYPPLPSRYPPSPPRYPSSHPRYPPSPPRYP 356
Score = 29.9 bits (64), Expect = 4.0
Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPP--PXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXLAIXXLXRX 992
P+PP PP+ + P P P P R P SP P + +R+ R
Sbjct: 350 PSPPRYPPSPPRYPSSHPRYPP---SPLRYLP--SPIRYPPSHSRYPSSHPRYPPSHLRY 404
Query: 993 PXSSXR-----XTXPPPSXXXPPTXXXXCPPXTLVSXH 1091
P SS R PPP PP+ P + + H
Sbjct: 405 PPSSLRYLPSHLRYPPPPLRYPPSPLRYPPSLSPICHH 442
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 34.7 bits (76), Expect = 0.14
Identities = 30/124 (24%), Positives = 37/124 (29%)
Frame = +3
Query: 735 PXPKSXSGPXXHXXXXIHATXXAIHSXXPAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPX 914
P P++ P T A + P PP P PPP P P PP
Sbjct: 112 PPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPP-PPPPI 170
Query: 915 SPXXXPXAXNRHHXXAXLAIXXLXRXPXSSXRXTXPPPSXXXPPTXXXXCPPXTLVSXHX 1094
+P A A+ P PPP PP PP ++
Sbjct: 171 APAATVPAP---------AVPLAAASPPPPSGGPPPPPPPPPPP------PPPPILELAA 215
Query: 1095 XPPP 1106
PPP
Sbjct: 216 PPPP 219
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 34.3 bits (75), Expect = 0.18
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRP 921
P P TL PPP+ PP P P P P P PP P
Sbjct: 123 PPPPTGTLP--PPPVTPPPGPETPPPPDTPAPPVPPTEAPPTAP 164
Score = 33.5 bits (73), Expect = 0.32
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSP 920
P PP PP + PPP P P PP +P
Sbjct: 131 PPPPVTPPPGPETPPPPDTPAPPVPPTEAPPTAP 164
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 33.9 bits (74), Expect = 0.24
Identities = 29/98 (29%), Positives = 31/98 (31%), Gaps = 3/98 (3%)
Frame = +3
Query: 822 APPXXP--PNXXKXPPPXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXLAIXXLXRXP 995
APP P P PP P P PP P P R +
Sbjct: 893 APPTTPTTPKPTTPAPPPPLPLAPEP---PPPLPPPPPPIQTTRP------TVPTTPTTQ 943
Query: 996 XSSXRXTXPPP-SXXXPPTXXXXCPPXTLVSXHXXPPP 1106
S+ R T PPP S PP PP L PPP
Sbjct: 944 ASTTRPTPPPPTSALPPPIPATQVPPPPLPPLPPPPPP 981
Score = 32.3 bits (70), Expect = 0.74
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 826 PPLXP--PXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXPXSQS 975
PP P P P P P PL P PP P PTV T P +Q+
Sbjct: 894 PPTTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPT-TPTTQA 944
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXPXS 969
P P PPPL PP PP P P P RP P + P +
Sbjct: 908 PPPPLPLAPEPPPPLPPPPPPIQTTRPTVP--TTPTTQASTTRPTPPPPTSALPPPIPAT 965
Query: 970 QSXXXXXXRXPRP 1008
Q P P
Sbjct: 966 QVPPPPLPPLPPP 978
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.24
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +1
Query: 766 PTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXL--PXPRXPLXXXPXXXXPPXRPXXPXXX 939
PT P P +T PP PP PP P P P P PP P
Sbjct: 350 PTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Query: 940 PT 945
PT
Sbjct: 410 PT 411
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLX----PPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPT 945
P P + PPP PP PP P P P P PP P PT
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPT 401
Score = 29.9 bits (64), Expect = 4.0
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 3/62 (4%)
Frame = +1
Query: 745 NXPXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXPP---NXLPXPRXPLXXXPXXXXPPX 915
N P PT P P PP PP PP N P P P P P
Sbjct: 353 NPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTN 412
Query: 916 RP 921
P
Sbjct: 413 GP 414
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +1
Query: 745 NXPXDXXPTXXXXFMPXPRRSTLXXXPPPLX---PPXPPNXLPXPRXPLXXXPXXXXPP 912
N P P P P + PPP PP PP P P P P PP
Sbjct: 352 NNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPP 410
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 33.1 bits (72), Expect = 0.42
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = +1
Query: 805 STLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTT 954
+TL P PP PP+ P P P PP P P P T+
Sbjct: 446 ATLPPLPSDEPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATS 495
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 33.1 bits (72), Expect = 0.42
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 786 HATXXAIHSXXPAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSP 920
H T + + P PP PP PPP P P PP P
Sbjct: 194 HPTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPP 238
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 826 PPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXP 930
PP PP PP P P P P PP P P
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPP 238
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTV 948
P P R PPP P P P P P P P P P PT+
Sbjct: 206 PPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTL 258
Score = 30.3 bits (65), Expect = 3.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 993 PXSSXRXTXPPPSXXXPPTXXXXCPPXTLVSXHXXPPPXKXHXP 1124
P S + T PPP PP PP S PPP P
Sbjct: 195 PTSPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPP 238
Score = 29.9 bits (64), Expect = 4.0
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVT 951
P P S PPP P P P P P PP P P P T
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPPT 262
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
P + P PP P P P P PP P P P
Sbjct: 198 PSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSP 237
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 32.7 bits (71), Expect = 0.56
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRP 921
PPP PP PP P P P P PP P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 826 PPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVT 951
PP PP PP P P P P PP P P +T
Sbjct: 464 PP--PPPPPPPPPPPPPPPPPPPPPPFPPPPPPTPLHLAAIT 503
Score = 28.7 bits (61), Expect = 9.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSP 920
P PP PP PPP P P PP +P
Sbjct: 464 PPPPPPPP-PPPPPPPPPPPPPPPPFPPPPPPTP 496
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 32.3 bits (70), Expect = 0.74
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -1
Query: 1097 GXVXXDKGXXRTXGVXGWGGXXGXGRGRXAGRG 999
G + G R G GWGG G G GR G G
Sbjct: 145 GGIGRGGGRGRGGGEGGWGGRGGNGGGRGGGEG 177
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 32.3 bits (70), Expect = 0.74
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +3
Query: 810 SXXPAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXLAIXXLXR 989
S P PP PP P P P P PP SP P + H A
Sbjct: 183 STIPTPPT-PPAPPSPPIPTAPPTPPMPETPLPPGSPHIPPAPLHPHIPPAPPNPSKAIA 241
Query: 990 XPXSSXRXTXPPPSXXXP 1043
P T PP+ P
Sbjct: 242 TPNPPMPETPLPPATPNP 259
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +1
Query: 796 PRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXP 930
P ST+ P P PP PP P P+ P P P P
Sbjct: 180 PAPSTIPTPPTPPAPPSPPIPTAPPTPPMPETPLPPGSPHIPPAP 224
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXP 963
P P ++ P P P PPN P P P P P P P + T P
Sbjct: 272 PAPPNPSIPAPPNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHIPPAP-PNPYIPTAPP 328
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPT 945
P P PPP+ P PP P P P+ P PP P PT
Sbjct: 183 PIPPIDPPRTQPPPIPPIDPPRTQPPPIPPI-DPPRTQPPPIFPQPTTPAPT 233
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXP 930
PPP+ P PP P P P+ P PP P P
Sbjct: 168 PPPIFPIDPPRTQPPPIPPI-DPPRTQPPPIPPIDP 202
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
PP + P PP + P P P PP P P P
Sbjct: 1238 PPAMPPDGPPKFMGLPPPPPGMRPMPPQPPFMPPPPRMQP 1277
Score = 29.9 bits (64), Expect = 4.0
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 787 MPXPRRSTLXXXPPPLX--PPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
MP P + PP PP PP P P P P P P P P
Sbjct: 1234 MPPPPPAMPPDGPPKFMGLPPPPPGMRPMPPQPPFMPPPPRMQPPGPPGPPGPP 1287
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/75 (25%), Positives = 21/75 (28%)
Frame = +1
Query: 718 GPXXXXXXRNXPXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPX 897
GP P P P P R + PPPL P P + P
Sbjct: 297 GPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSA 356
Query: 898 XXXPPXRPXXPXXXP 942
PP R P P
Sbjct: 357 PPPPPGRAPQPLGGP 371
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPT 945
P P RS+ PPP P + P P P RP P PT
Sbjct: 207 PPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPT 258
Score = 29.1 bits (62), Expect = 6.9
Identities = 24/97 (24%), Positives = 28/97 (28%), Gaps = 1/97 (1%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXL-AIXXLXRXP 995
P P P + + PPP P PP P P + + L P
Sbjct: 251 PPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAP 310
Query: 996 XSSXRXTXPPPSXXXPPTXXXXCPPXTLVSXHXXPPP 1106
T PPP P PP L PPP
Sbjct: 311 PPPLNATPPPP---PPSRDQVPLPPPPLRGQIAPPPP 344
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/75 (25%), Positives = 21/75 (28%)
Frame = +1
Query: 718 GPXXXXXXRNXPXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPX 897
GP P P P P R + PPPL P P + P
Sbjct: 209 GPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSA 268
Query: 898 XXXPPXRPXXPXXXP 942
PP R P P
Sbjct: 269 PPPPPGRAPQPLGGP 283
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPT 945
P P RS+ PPP P + P P P RP P PT
Sbjct: 119 PPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPT 170
Score = 29.1 bits (62), Expect = 6.9
Identities = 24/97 (24%), Positives = 28/97 (28%), Gaps = 1/97 (1%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXL-AIXXLXRXP 995
P P P + + PPP P PP P P + + L P
Sbjct: 163 PPPMRGPTSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAP 222
Query: 996 XSSXRXTXPPPSXXXPPTXXXXCPPXTLVSXHXXPPP 1106
T PPP P PP L PPP
Sbjct: 223 PPPLNATPPPP---PPSRDQVPLPPPPLRGQIAPPPP 256
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 31.1 bits (67), Expect = 1.7
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +1
Query: 751 PXDXXPTXXXXFMPXPRRSTLXXXPPPLX-PPXPPNXLPXPRXPLXXXPXXXXPPXRPXX 927
P D P P P + PP P PP +P P P P PP
Sbjct: 20 PGDPPPNTTIPRAPPPNTAIPGDRPPNTPIPGDPPPNIPIPGNPPPNTPIPGDPPPNTPI 79
Query: 928 PXXXPTVT 951
P P T
Sbjct: 80 PGDPPPNT 87
Score = 29.5 bits (63), Expect = 5.2
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +1
Query: 751 PXDXXPTXXXXFMPXPRRSTLXXXPPPLXP--PXPPNXLPXPRXPLXXXPXXXXPPXRPX 924
P D P P P + + PPP P PP P P P P PP
Sbjct: 50 PGDPPPNIPIPGNPPPN-TPIPGDPPPNTPIPGDPPPNTPIPGNPPPNTPIPGDPPPNTP 108
Query: 925 XPXXXPTVT 951
P P T
Sbjct: 109 IPGDPPPNT 117
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTT 954
PPP PP PP P P P PP P P T TT
Sbjct: 1158 PPPPPPPPPPPSSPSP-------PPPPPPPPPPPTPTTTTTTTT 1194
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 823 PPPLXPPXPPN--XLPXPRXPLXXXPXXXXPPXRPXXP 930
PPP P PP+ +P PR P PP +P P
Sbjct: 1042 PPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPP 1079
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXP-XXXPTVTTXXPX 966
P P S + PP P P P PR P PP R P P T P
Sbjct: 1047 PSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPTEPPP 1106
Query: 967 SQ 972
Q
Sbjct: 1107 RQ 1108
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRP 921
P P+ + P PP PP P PR L P P P
Sbjct: 124 PRPKAKRIRRLLPTPPPPTPPQSTPKPRRVLPTPPPKPPTPRPP 167
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 30.3 bits (65), Expect = 3.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 1076 GXXRTXGVXGWGGXXGXGRGRXAGRG 999
G R+ G G+GG G GRG GRG
Sbjct: 317 GGYRSGGGGGYGGGRGGGRGYGGGRG 342
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.9 bits (64), Expect = 4.0
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Frame = +1
Query: 751 PXDXXPTXXXXFMPXPRRSTLXXXPPPLXP---PXPPNXLPXPRXPLXXXPXXXXPPXRP 921
P P P P + PPP P P PP LP P P P PP P
Sbjct: 52 PPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPP-PAQPAPQPPPAPP 110
Query: 922 XXPXXXPTVTT 954
+TT
Sbjct: 111 HFLPFIIIITT 121
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSP 920
PAPP PP PPP P PP P
Sbjct: 302 PAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 29.9 bits (64), Expect = 4.0
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +1
Query: 751 PXDXXPTXXXXFMPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPP 912
P P +P P + PPPL PP P +P P P PP
Sbjct: 370 PPPAMPAMFNPHVPPPMIGPVTVPPPPLIPP-PQASIPPPTMIQTLPPPSVPPP 422
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +1
Query: 799 RRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXP-PXRPXXPXXXPTVTTXXPXSQS 975
R + L P PP P+ P P L P P P P P PT ++ P S
Sbjct: 497 RHNLLILRQHPSYPPTQPSYPPTPSSYLPTQPYYPPPQPYPPTQPSYPPTPSSYPPTQPS 556
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.5 bits (63), Expect = 5.2
Identities = 27/105 (25%), Positives = 32/105 (30%)
Frame = +3
Query: 810 SXXPAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSPXXXPXAXNRHHXXAXLAIXXLXR 989
S APP P PPP P R PP P + A +
Sbjct: 310 SRGSAPPPPPARMGTAPPPP--PPSRSSQRPPPPSRGAPPPPSMGM----APPPVGGAAP 363
Query: 990 XPXSSXRXTXPPPSXXXPPTXXXXCPPXTLVSXHXXPPPXKXHXP 1124
P PPP PP PP +L + PPP + P
Sbjct: 364 PPPPPPPVGGPPP----PPPPIEGRPPSSLGNPPPPPPPGRGAPP 404
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXPTVTTXXPXS 969
P P RS+ PP P PP+ P P PP P P + P S
Sbjct: 329 PPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSS 388
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +1
Query: 787 MPXPRRSTLXXXPPPLXPPXP--PNXLPXPRXPLXXXPXXXXPPXRPXXP 930
+P S+L PPP PP P LP P P P P P P
Sbjct: 683 LPVIEGSSLSVPPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSP 732
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 819 PAPPXXPPNXXKXPPPXXXPXXXXPXRXXPPXSP 920
P PP PP PPP P PP P
Sbjct: 713 PPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPP 746
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 790 PXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXPXXXXPP 912
P P PPP PP P P P P+ PP
Sbjct: 665 PPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 787 MPXPRRSTLXXXPPPLXPPXPPNXLPXPRXPLXXXP 894
MP P + PPP+ P PP +P P P+ P
Sbjct: 78 MPFPPPPPIYMPPPPVYMPPPPVYMPPP-MPMGDVP 112
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +1
Query: 787 MPXPRRSTLXXXPPPLXPPX-PPNXLPXPRXPLXXXPXXXXPPXRPXXPXXXP 942
+P P S PP P PP P PR P P PP P P
Sbjct: 411 VPPPGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPPPGAPHPRVPP 463
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,561,945
Number of Sequences: 59808
Number of extensions: 160166
Number of successful extensions: 2114
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3486073542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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