Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B16
(975 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.11c |rps2602|rps26-2|40S ribosomal protein S26|Schizosa... 159 5e-40
SPAC806.03c |rps2601|rps26-1, rps26|40S ribosomal protein S26|Sc... 154 2e-38
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.011
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.061
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.14
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.19
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.25
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.25
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.43
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.57
SPCC126.15c |sec65||signal recognition particle subunit Sec65 |S... 29 1.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 1.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.3
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 28 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.0
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 26 9.3
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 9.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.3
>SPAC1805.11c |rps2602|rps26-2|40S ribosomal protein
S26|Schizosaccharomyces pombe|chr 1|||Manual
Length = 119
Score = 159 bits (386), Expect = 5e-40
Identities = 75/117 (64%), Positives = 93/117 (79%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 279
MT+KRRN GR KHGRGHVK VRC NC+R VPKDKAIK++ IRN+VE AA+RD+++ASVY
Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYS 60
Query: 280 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRT-PPKSNFPRDMSR--PQAVQR 441
+ +PKLY KL YCVSCAIHS+VVR RS++ RRIRT PP+ + RD + P AV +
Sbjct: 61 EYTIPKLYIKLQYCVSCAIHSRVVRVRSREGRRIRTPPPRVRYNRDGKKVNPTAVAK 117
>SPAC806.03c |rps2601|rps26-1, rps26|40S ribosomal protein
S26|Schizosaccharomyces pombe|chr 1|||Manual
Length = 120
Score = 154 bits (374), Expect = 2e-38
Identities = 72/117 (61%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Frame = +1
Query: 100 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 279
MT+KRRN GR KHGRGH K VRC NC+R VPKDKAIK++ IRN+VE AA+RD+++ASVY
Sbjct: 1 MTQKRRNCGRNKHGRGHTKFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYS 60
Query: 280 MFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRT-PPKSNFPRDMSR--PQAVQR 441
+ +PK+Y KL YCVSCAIH++VVR RS++ RRIRT PP+ + RD R P A+ +
Sbjct: 61 EYAIPKIYVKLQYCVSCAIHARVVRVRSREGRRIRTPPPRVRYNRDGKRVNPAAIAK 117
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 971 FXGEGXGXRXXGXXGXXGGGXAGGXGGXGGGGXGXG 864
F GEG G G GG GG GG GGG G G
Sbjct: 213 FGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 965 GEGXGXRXXGXXGXXGG--GXAGGXGGXGGGGXGXG 864
G G G G G GG G GG GG GGG G G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Score = 30.3 bits (65), Expect = 0.43
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 959 GXGXRXXGXXGXXGG--GXAGGXGGXGGGGXGXG 864
G G G G GG G GG GG GGG G G
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 29.9 bits (64), Expect = 0.57
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 918 GXXGXGXGGXGRGGXGGGXXGXRGA-GXXRGRPXVXGGXWXG 796
G G G G GG GGG G G G G P GG G
Sbjct: 212 GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Score = 29.5 bits (63), Expect = 0.75
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 959 GXGXRXXGXXGXXGG--GXAGGXGGXGGGGXGXG 864
G G G G GG G GG GG GGG G G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.061
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXP 960
P P PP P PP+ PPP P P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 809 PPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXP 919
PP +P AP P PP PP P P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 871 PXPPPPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P PPPP PP P P P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.7 bits (66), Expect = 0.33
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 797 PXQXPPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXP 919
P P P P P+ PP PP P P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P P P PP PPP P P P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.14
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 966 GRGXGXAXXWXXXXEXGXXGXGXGGXGRGGXGGGXXGXRGAGXXRG 829
GRG G G G GG GG GG G G G RG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 909 GXGXGGXGRGGXGGGXXGXRGAGXXRGR 826
G G GRGG GGG G RG G R
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGAR 44
Score = 29.5 bits (63), Expect = 0.75
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 918 GXXGXGXGGX--GRGGXGGGXXGXRGAGXXRG 829
G G G GG GRGG GG G G+ RG
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -1
Query: 966 GRGXGXAXXWXXXXEXGXXGXGXGGXGRGGXGGGXXGXRG 847
GRG G G G G GRGG GG G +G
Sbjct: 31 GRG-GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 965 GEGXGXRXXGXXGXXGGGXAGGXGGXGGGGXG 870
G G G G GG G GG GG G
Sbjct: 39 GRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.19
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = +1
Query: 865 PXPXPPPPXPPX--PPAXPPPLXP 930
P PPPP PP PP+ PPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.5 bits (63), Expect = 0.75
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 871 PXPPPPXPPXPPAXPPPLXPXXP 939
P PP PP PP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +2
Query: 845 APLXPXXPPPXPPRP--XPPXPXPXXP 919
A L P PPP PP P PP P P
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 883 PPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
PP P PP PP P P P P P
Sbjct: 5 PPGNPPPPPPPPGFEP--PSQPPPPPPP 30
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -1
Query: 918 GXXGXGXGGXGRGGXGGGXXGXRGAGXXRG-RPXVXGGXWXG 796
G G GG RGG GGG G G G G R GG G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 959 GXGXRXXGXXGXXGGGXAGGXGGXGGGGXGXG 864
G G G G GG GG G GGG G
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = -2
Query: 971 FXGEGXGXRXXGXXGXXGGGX-AGGXGGXGGGGXG 870
F G G G G GGG G GG GG G
Sbjct: 154 FGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P P PP P P P P+ P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 30.7 bits (66), Expect = 0.33
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 809 PPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXP 910
PP +P PAP+ P P P PP P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 871 PXPPPPXPPXPPAXPPPLXPXXP 939
P PPPP P A PPP P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 809 PPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXP 910
PP + + PAP PPP P PP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P P P PP P PPP P P P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.1 bits (62), Expect = 0.99
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P P P P PP P PP P P P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 29.1 bits (62), Expect = 0.99
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +1
Query: 865 PXPXPPPP-----XPPXPPAXPPPLXPXXPXXRXPXP 960
P P PPPP PP PP PP + P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 865 PXPXPPP-PXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P P PPP P PP PPP P P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPP--PGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 9/40 (22%)
Frame = +2
Query: 812 PXTXGLPLXXPAPLXPXXPPPXPPR---------PXPPXP 904
P +P+ PAP+ PPP PP P PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.43
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 809 PPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXP 910
PP P+ P P PP PP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.9 bits (64), Expect = 0.57
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXP 960
P P PP P PP+ PP P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 797 PXQXPPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXP 919
P P PL P P PP P P P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXPS 963
P P P PP PPA P P P P S
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVAS 490
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 871 PXPPPPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P PPP P PPPL P P P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +2
Query: 782 PXXXXPXQXPPXTXGLPLXXPA-PLXPXXPPPXPPRPXPPXPXPXXPXSXXXXQXXAXPX 958
P P P LP+ PA P P P PP P P P + P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 959 P 961
P
Sbjct: 484 P 484
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +2
Query: 797 PXQXPPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXPXSXXXXQXXAXPXPLP 967
P PP G PL PP P PP P P S + P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXPS 963
P PP P PP+ PP L P PS
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Score = 25.8 bits (54), Expect = 9.3
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Frame = +3
Query: 660 PSXLFRPPXIXSNXPVHPPPXPXPXXXFPGSXXQV------XAXXXLPXNXXPPNXPPXH 821
PS +PP + S+ V PP P P PG + P PP+ PP
Sbjct: 370 PSTGRQPPPLSSSRAVSNPPAPPP--AIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSA 427
Query: 822 XASPFXXXPPS 854
S PPS
Sbjct: 428 PPSLPPSAPPS 438
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.57
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +2
Query: 812 PXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXPXSXXXXQXXAXPXPLP 967
P G+P P P P P P PP P P A P P+P
Sbjct: 1086 PAPSGIP-PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 29.1 bits (62), Expect = 0.99
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +2
Query: 809 PPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXPXSXXXXQXXAXPXPLP 967
P + G+P P P PP PP PP P P A P P P
Sbjct: 1172 PAPSSGIP-PVPKPAA-GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/63 (28%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Frame = +2
Query: 782 PXXXXPXQXPPXTXGLPLXXPAPLXPXXPPPXP-PRPXPPXPXPXXPXSXXXXQXXAXPX 958
P P PP P P PP P P PP P P A P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 959 PLP 967
P P
Sbjct: 1143 PKP 1145
Score = 28.3 bits (60), Expect = 1.7
Identities = 21/77 (27%), Positives = 26/77 (33%), Gaps = 7/77 (9%)
Frame = +2
Query: 758 AGXGRLXXPXXXXPXQXPPXTXGLPLXXPAPLXPXXPPP--XPPRP-----XPPXPXPXX 916
+G + P P P + P+ PA P PPP PP P PP P P
Sbjct: 1156 SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Query: 917 PXSXXXXQXXAXPXPLP 967
P P+P
Sbjct: 1216 APPVPTPSAGLPPVPVP 1232
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 812 PXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXPXSXXXXQXXAXPXPLP 967
P G P P P P P P PP P P A P P P
Sbjct: 1153 PAPSGAP-PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 865 PXPXPPPPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P P P PP PP P P P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.6 bits (56), Expect = 5.3
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 6/71 (8%)
Frame = +2
Query: 773 LXXPXXXXPXQXPPXTXGLPLXXP------APLXPXXPPPXPPRPXPPXPXPXXPXSXXX 934
L P P PP PL P APL P P PP P P
Sbjct: 979 LSSPTSEPPKDHPPSA---PLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIP 1035
Query: 935 XQXXAXPXPLP 967
A P P+P
Sbjct: 1036 VPSTAPPVPIP 1046
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Frame = +2
Query: 812 PXTXGLPLXXPAPLXPXXPPPXP-PRPXPPXPXPXXPXSXXXXQXXAXPXPLP 967
P G P P P PP P P PP P P A P P P
Sbjct: 1115 PAPSGAP---PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 681 PXIXSNXPVHPPPXPXPXXXFPGSXXQVXAXXXLPXNXXPPNXPPXHXASP 833
P S P PPP P P P A + PP P A P
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 865 PXPXPPPPXPPXP-PAXPPPLXPXXPXXRXPXPSP 966
P P P PP P P+ PP+ P P P+P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPV-PKPSVAAPPVPAP 1155
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 865 PXPXPPPPXPPXP-PAXPPPLXPXXPXXRXPXPSP 966
P P P PP P P+ PP+ P P P+P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPV-PKPSVAAPPVPAP 1174
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +2
Query: 782 PXXXXPXQXPPX---TXGLPLXXPAPLXPXXPPP---XPPRPXPPXPXPXXP 919
P P + PP + G+P P P P P PP P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
>SPCC126.15c |sec65||signal recognition particle subunit Sec65
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 181 RCVPKDKAIKKFVIRNIVEAAAVRDI 258
RCVPKDKAI + +NI A VRD+
Sbjct: 20 RCVPKDKAILNPLAKNI--ADVVRDL 43
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 865 PXPXPPPPX--PPXPPAXPPPLXPXXPXXRXP 954
P PP P PP P + PPP P P P
Sbjct: 154 PASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +2
Query: 809 PPXTXGLPLXXP--APLXPXXPPPXPPRPXPP 898
PP P+ P AP P PP PP+ PP
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +2
Query: 797 PXQXPPXTXGLPLXXP--APLXPXXPPPXPPRPXP-PXPXPXXPXSXXXXQXXAXPXPLP 967
P P T L P AP P PPP P P P P P S A P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +1
Query: 865 PXPXPPPPXP-PXPPAXPPPL 924
P P PPPP P P A PPL
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPL 23
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 880 PPPXPPXPPAXPPPLXPXXPXXRXPXP 960
PPP P P PP P P P P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +1
Query: 865 PXPXPP-PPXPPXPPAXPPPLXPXXPXXRXPXPSP 966
P PP P PP PA PP+ P P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 871 PXPPPPXPPXPPAXPPPLXP 930
P PPPP P PA P P
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 7.0
Identities = 16/64 (25%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = +3
Query: 660 PSXLFRPPXIXSNXPVHPPPXPXPXXXFPGSXXQVXAXXXLPXNXXPP-NXPPXHXASPF 836
P RPP P PPP P P + + P P PP + P
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPS 192
Query: 837 XXXP 848
P
Sbjct: 193 AVPP 196
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 797 PXQXPPXTXGLPLXXPAPLXPXXPPP 874
P + PP LP P P+ P PPP
Sbjct: 180 PVKSPPSAPSLPSAVP-PMPPKVPPP 204
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect(2) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 871 PXPPPPXPPXPP 906
P PPP PP PP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 1.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 865 PXPXPPPPXP 894
P P PPPP P
Sbjct: 905 PTPPPPPPLP 914
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 918 GXXGXGXGGXGRGGXGGGXXGXRGAGXXRGRP 823
G G G GRGG GGG RG G G P
Sbjct: 454 GGFGGRGGFGGRGGFGGGRGRGRG-GARSGNP 484
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 918 GXXGXGXGGXGRGGXGGGXXGXRGAGXXRGRPXVXGG 808
G G G GRGG GG G G G RGR G
Sbjct: 448 GSRGGRGGFGGRGGFGG--RGGFGGGRGRGRGGARSG 482
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = -1
Query: 240 RFYDVPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASS 121
+ +DV + +L + + L P+A+C +S ++ TS++ SS
Sbjct: 115 KVFDVESIDLVNIIDLEFLPKAICCFNSPSLKTSLIAVSS 154
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 865 PXPXPPPPXPPXPP 906
P P PPPP PP P
Sbjct: 234 PLPAPPPPPPPTLP 247
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 871 PXPPPPXPPXPPAXPP 918
P P PP PP PP PP
Sbjct: 234 PLPAPPPPP-PPTLPP 248
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 797 PXQXPPXTXGLPLXXPAPLXPXX-PPPXPPRPXPPXPXPXXP 919
P + P LP P P P PP P P P P P P
Sbjct: 99 PEEPLPREPPLP-NEPVPEEPLPGEPPLPDEPVPEEPLPGEP 139
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 25.8 bits (54), Expect = 9.3
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 64 PLLCSPGSEVRNMTRKRRNGGRAKHGRG-HVKAVRCTNC-ARCVPKDKAIKKFVIRNIVE 237
P+L +E++ R+ R + G V ++ N +PKDKA++ RN +
Sbjct: 124 PVLQGSATEIKPQPRRSRFDRTERVGASLSVSEIQSENPRVDVIPKDKAVENNHQRNAEK 183
Query: 238 AAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKK-DRRIRTPPK 396
A I DA KL A+L V SK + SKK + ++ T P+
Sbjct: 184 PVASDKITDA---------KLLARLER-VRAWKESKAKQEASKKEEHKLNTKPQ 227
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/60 (28%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 660 PSXLFRPPXIXSNXPVHPPPXPXPXXXFPGSXXQVXAXXXLPXNXXPPNXPPXH--XASP 833
P+ P PV P P P P + P + PP PP H ASP
Sbjct: 30 PARTVSTPAFMEPAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPP-APPTHQREASP 88
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 797 PXQXPPXTXGLPLXXPAPLXPXXPPPXPPRPXPPXPXPXXP 919
P P T P P P PPP P R P P
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,609,950
Number of Sequences: 5004
Number of extensions: 45466
Number of successful extensions: 530
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 501293686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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