Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B12
(1082 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.82
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.4
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.4
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.9
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 30 2.5
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 30 2.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 3.3
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 4.4
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 4.4
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 4.4
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 4.4
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 4.4
AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical ... 29 5.8
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 5.8
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 29 7.6
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 29 7.6
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.82
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 190 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 303
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 281 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 102
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 101 S 99
S
Sbjct: 136 S 136
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -1
Query: 281 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 102
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 101 S 99
S
Sbjct: 136 S 136
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = -2
Query: 760 GGXXGNXGGGFXGXPXGGFXRGXKRGXISXGXXXXGXXXXTLFGXXGG 617
GG G GGG G GGF G G G +L G GG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGG 102
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 772 GKXXGGXXGNXGG--GFXGXPXGGFXRGXKRGXISXGXXXXGXXXXTLFGXXGGXR 611
G+ GG G GG GF GG RG RG S G G + G GG R
Sbjct: 8 GRGGGGFRGGRGGGSGFTPRGGGGGFRGGDRGR-SPGGFRGGDRGRSSSGFRGGDR 62
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -2
Query: 775 EGKXXGGXXGNXGGGFXGXPXGGFXRGXKRGXISXGXXXXGXXXXTLFGXXGGXR 611
+G GG G GGGF G GGF RG G G G GG R
Sbjct: 524 DGGFRGGFGGRGGGGFRGGDRGGF-----RGRGGGGGFRGGRGGDRGGGFRGGRR 573
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 772 GKXXGGXXGNXGGGFXGXPXGGFXRGXKRGXISXGXXXXG 653
G GG G GGGF G GG+ G G G G
Sbjct: 174 GYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGG 213
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 4.4
Identities = 22/54 (40%), Positives = 22/54 (40%)
Frame = -2
Query: 772 GKXXGGXXGNXGGGFXGXPXGGFXRGXKRGXISXGXXXXGXXXXTLFGXXGGXR 611
G GG G GGGF G GGF RG RG G G G GG R
Sbjct: 332 GGFDGGRGG--GGGFRGGDRGGF-RGGDRGGF-RGGDRGGFRGGDRGGDRGGFR 381
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -1
Query: 236 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 84
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>AF047659-5|AAC04429.1| 347|Caenorhabditis elegans Hypothetical
protein K07H8.8 protein.
Length = 347
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 314 GTPWNFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAF 493
G +FA Q W D K +K+ IQ+ TE+ + N + + ++N N++
Sbjct: 239 GADTHFAPQTWYCDMKNNIKNSTVIQYSSTGTEKIKMIDNLLTVFKNRNVPEENLNEVRE 298
Query: 494 GDSKDKTSKKVS 529
SK KT S
Sbjct: 299 ELSKGKTQHSTS 310
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 276 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 112
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 208 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKR---NTMELRLPVMD 348
+GE++ A+ KC +K K E A+++ I+NG + T++++LP D
Sbjct: 1107 LGEWKAALDKCDAQIKSVKAE-YDHAIEQ-IKNGVKTMSQTLDIKLPSAD 1154
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 208 IGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKR---NTMELRLPVMD 348
+GE++ A+ KC +K K E A+++ I+NG + T++++LP D
Sbjct: 1107 LGEWKAALDKCDAQIKSVKAE-YDHAIEQ-IKNGVKTMSQTLDIKLPSAD 1154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,639,369
Number of Sequences: 27780
Number of extensions: 353121
Number of successful extensions: 1230
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2908502164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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