Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B12
         (1082 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   1.5  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   2.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   2.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   2.0  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   6.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   6.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.2  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 347 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIA 490
           T + K+I K   P + ++I     V ++   DH    L+D   +  IA
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIA 171


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 226 AIAKCSEYLKEKKGEVIKEAVKRLIEN 306
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 226 AIAKCSEYLKEKKGEVIKEAVKRLIEN 306
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 226 AIAKCSEYLKEKKGEVIKEAVKRLIEN 306
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 556 FSNTGVNXPGDFLAG 512
           FS +G N PG F AG
Sbjct: 63  FSPSGPNSPGSFTAG 77


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 556 FSNTGVNXPGDFLAG 512
           FS +G N PG F AG
Sbjct: 63  FSPSGPNSPGSFTAG 77


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 654 GXQXXPFSGXWEVXGXW 604
           G    PFS  WEV   W
Sbjct: 115 GLAVLPFSATWEVFKVW 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,835
Number of Sequences: 438
Number of extensions: 5532
Number of successful extensions: 98
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 36270801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)