Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B06
(1001 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502... 33 0.36
08_02_1129 - 24513568-24514296,24515380-24515817 32 0.83
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 31 1.1
09_04_0579 + 18676165-18676524,18676846-18677058,18677136-186772... 30 3.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 3.3
05_03_0515 + 14930736-14932697 30 3.3
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 30 3.3
06_01_0486 - 3455030-3455770 29 4.4
04_04_0347 + 24564589-24565296 29 4.4
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 4.4
01_05_0164 + 18827390-18827710 29 4.4
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 5.8
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 7.7
>01_01_0659 -
5021159-5021266,5021364-5021494,5021619-5021785,
5021950-5022065,5022226-5022381,5022570-5022678,
5023153-5023262,5023807-5023992,5024077-5024667
Length = 557
Score = 33.1 bits (72), Expect = 0.36
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 294 KFPSIINEGRVEGDKYQISIHLPGYEQKDINVK 392
K ++ E +VEGD Y + +H PG+ K ++V+
Sbjct: 216 KDDEVVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248
>08_02_1129 - 24513568-24514296,24515380-24515817
Length = 388
Score = 31.9 bits (69), Expect = 0.83
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -3
Query: 723 AXGGRGSXLQLSRSHWXSGLSPSGRQRPARCSRWXTPSLHDLHS*GSSQWALQLASC 553
A G L + S S +SP QR A CSRW PS L + + A+QL C
Sbjct: 243 AFHGLSLALLFAASVSASAVSPPAEQRAACCSRWWVPSSLSLVASLALAAAVQLRVC 299
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P APP P PP P PP PP P
Sbjct: 345 PSNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPP 377
>09_04_0579 +
18676165-18676524,18676846-18677058,18677136-18677288,
18677503-18677622,18677696-18677782,18677876-18678313
Length = 456
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 553 ARGQLQSPLRRPLRM*VVKRWSSPPRATCGTLTSAWRQPRXPMR 684
A G+ P P V SS PR C LTS +R+P P R
Sbjct: 5 AVGEATPPPGGPPSRVSVSSSSSTPRRRCAALTSRFREPASPRR 48
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXPLSSXGXXGXP 968
P PP P PP P PP PP P G P
Sbjct: 1154 PPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQP 1196
>05_03_0515 + 14930736-14932697
Length = 653
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 93 IALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESM-LDTHSLWSNLANEMQHLD 269
+ L +C + V +P + +W YH + YV +S+ ++ S WSN + L
Sbjct: 308 LCLEVCAIFFMVMMSPWTWASLQYWKYHRLADAAWYVFKSLQTESMSWWSNSLGQYNFLS 367
Query: 270 DMMKE 284
+
Sbjct: 368 SCFSD 372
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 849 APPXPXXPPXXXPXXXPPXXXXXXXPPXXPLSS 947
+PP P P P PP PP PLSS
Sbjct: 37 SPPPPPPSPVPSPAPPPPPHRPSPSPPPNPLSS 69
>06_01_0486 - 3455030-3455770
Length = 246
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 122 PYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPP 154
>04_04_0347 + 24564589-24565296
Length = 235
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 90 MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDPF 191
M L+ LLAA SAA +H ++ PY HH+ P+
Sbjct: 5 MSMLLASSLLAAASAARADHHSPAYAPYPHHHAPW 39
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 358 PPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPP 390
>01_05_0164 + 18827390-18827710
Length = 106
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 783 GAKLIXESGKXXGXGL*CWTAXGGRGSXLQLSRSHWXSGLSPSGRQRP 640
G K + E+ G A G RG ++ SR+ W L+P+ +RP
Sbjct: 14 GVKKVKEAATGEGARTVKEAAVGARGFQIRWSRTTWRPDLAPTTSRRP 61
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 852 PPXPXXPPXXXPXXXPPXXXXXXXPPXXPLSSXGXXGXP 968
PP P PP P PP PP P G P
Sbjct: 426 PPPPLPPPPPPPPPPPPPLPPNMPPPLPPPPEPELNGAP 464
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 28.7 bits (61), Expect = 7.7
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 201 VRESMLDTHSLWSNLANEMQHLDDMMKELSLKFPSIINEGRVEGDKYQIS 350
+++++L+ LA+E+Q D ++ EL K S + R+E + ++S
Sbjct: 1298 LKQTLLEKSGELEKLAHELQSKDSLLIELEAKIKSYADADRIEALESELS 1347
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,807,280
Number of Sequences: 37544
Number of extensions: 478408
Number of successful extensions: 1932
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2940399740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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