Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B06
         (1001 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB014583-1|BAA31658.3|  844|Homo sapiens KIAA0683 protein protein.     34   0.70 
BC017188-1|AAH17188.1|  837|Homo sapiens TEL2, telomere maintena...    34   0.93 
AL031705-4|CAC37283.1|  837|Homo sapiens protein ( Human DNA seq...    34   0.93 
AE006467-10|AAK61284.1|  837|Homo sapiens KIAA0683 protein.            34   0.93 

>AB014583-1|BAA31658.3|  844|Homo sapiens KIAA0683 protein protein.
          Length = 844

 Score = 34.3 bits (75), Expect = 0.70
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 149 PWLVTLAVSPLRPLQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVPQHYKRR--T 322
           P  V LAV     + +L S +  GH F  ++  +R   LG  +  A+    + +     +
Sbjct: 12  PSRVRLAVR--EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFS 67

Query: 323 RGRRQVSDIYSPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPXLGCEFR 481
              R ++   SPAWL    H R  E W++   +G   Q F  L+E  E   G  FR
Sbjct: 68  PVLRCLASRLSPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 123


>BC017188-1|AAH17188.1|  837|Homo sapiens TEL2, telomere maintenance
           2, homolog (S. cerevisiae) protein.
          Length = 837

 Score = 33.9 bits (74), Expect = 0.93
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 149 PWLVTLAVSPLRPLQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVPQHYKRR--T 322
           P  V LAV     + +L S +  GH F  ++  +R   LG  +  A+    + +     +
Sbjct: 5   PSEVRLAVR--EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFS 60

Query: 323 RGRRQVSDIYSPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPXLGCEFR 481
              R ++   SPAWL    H R  E W++   +G   Q F  L+E  E   G  FR
Sbjct: 61  PVLRCLASRLSPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116


>AL031705-4|CAC37283.1|  837|Homo sapiens protein ( Human DNA
           sequence from clone LA16c-305C8 on chromosome 16. ).
          Length = 837

 Score = 33.9 bits (74), Expect = 0.93
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 149 PWLVTLAVSPLRPLQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVPQHYKRR--T 322
           P  V LAV     + +L S +  GH F  ++  +R   LG  +  A+    + +     +
Sbjct: 5   PSEVRLAVR--EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFS 60

Query: 323 RGRRQVSDIYSPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPXLGCEFR 481
              R ++   SPAWL    H R  E W++   +G   Q F  L+E  E   G  FR
Sbjct: 61  PVLRCLASRLSPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116


>AE006467-10|AAK61284.1|  837|Homo sapiens KIAA0683 protein.
          Length = 837

 Score = 33.9 bits (74), Expect = 0.93
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
 Frame = +2

Query: 149 PWLVTLAVSPLRPLQSLRSGKHVGHTFALVQPCQRNATLGRHDEGAVVEVPQHYKRR--T 322
           P  V LAV     + +L S +  GH F  ++  +R   LG  +  A+    + +     +
Sbjct: 5   PSEVRLAVR--EAIHALSSSEDGGHIFCTLESLKRY--LGEMEPPALPREKEEFASAHFS 60

Query: 323 RGRRQVSDIYSPAWLRTERHQRESEKWSA---DGAG*QCF*SLLENTEPXLGCEFR 481
              R ++   SPAWL    H R  E W++   +G   Q F  L+E  E   G  FR
Sbjct: 61  PVLRCLASRLSPAWLELLPHGRLEELWASFFLEGPADQAFLVLMETIEGAAGPSFR 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,728,625
Number of Sequences: 237096
Number of extensions: 2569867
Number of successful extensions: 12945
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12579
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13378564892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)