Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B06
(1001 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 33 0.32
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.98
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.98
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.98
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 29 3.9
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 5.2
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 29 5.2
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 6.9
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 6.9
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 6.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 9.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 9.1
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.32
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 99 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 188
L LC LLA SA YY S + PY++Y P
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.5 bits (68), Expect = 0.98
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 477 SEGSWVYEKDVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSREEM-EFXTESNVRDVDV 653
+E S + DV KI PL+ Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 654 RLETAQXTNEI 686
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 498 EKDVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSREEM-EFXTESNVRDVDVRLETAQX 674
+ DV K+ PL+ Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 675 TNEI 686
E+
Sbjct: 3508 QQEV 3511
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.5 bits (68), Expect = 0.98
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 477 SEGSWVYEKDVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSREEM-EFXTESNVRDVDV 653
+E S + DV KI PL+ Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 654 RLETAQXTNEI 686
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 498 EKDVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSREEM-EFXTESNVRDVDVRLETAQX 674
+ DV K+ PL+ Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 675 TNEI 686
E+
Sbjct: 3508 QQEV 3511
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.5 bits (68), Expect = 0.98
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 477 SEGSWVYEKDVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSREEM-EFXTESNVRDVDV 653
+E S + DV KI PL+ Q + VA P+E T +V +E ++++V V
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAA 3426
Query: 654 RLETAQXTNEI 686
LE Q E+
Sbjct: 3427 PLEQTQIQQEV 3437
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 498 EKDVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSREEM-EFXTESNVRDVDVRLETAQX 674
+ DV K+ PL+ Q + VA P+E T +V +E ++++V V LE Q
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKEAAPSEPSQADVPKVAAPLEQTQI 3507
Query: 675 TNEI 686
E+
Sbjct: 3508 QQEV 3511
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = -1
Query: 686 DLIGXLGCLQADVNVPHVALGGELHLFTTYIRRGRLSGLCNWPLAILWLLXLQREGDFQH 507
D+IG + + DV P+ L LF + + L L W + +REG F+
Sbjct: 926 DVIGIMDNI--DVEKPNAITNAGLRLFAFREKFEKQEALLKTMLMFKWCITEEREGSFRA 983
Query: 506 VFLVNPAAFGI 474
++ FG+
Sbjct: 984 TYIAKLLRFGM 994
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 525 PLKXKQPEDSKRPVAEPTETTPTNVSREEMEFXTES 632
P+ P + AEPT TTP S + ++F ES
Sbjct: 64 PMTTLPPSTTTSTTAEPTTTTPLKSSTDSVDFDEES 99
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 6 protein.
Length = 1254
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 549 DSKRPVAEPTETTPTNVSREEMEFXTESNVRDVDVRLETAQXTNE 683
D +P E PTN +EMEF E +R+ +++E A+ E
Sbjct: 1073 DEAQPTDEIRRAQPTNEMDKEMEF--EKRIREQRIQMEQAKRLRE 1115
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 540 AXASAGR*FSTRLSRKPSCLRNSHPRXGSVFSSND 436
A + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 504 DVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSR 605
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 504 DVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSR 605
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 504 DVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSR 605
D +K++ P+ P+ + PVAEP +PT ++
Sbjct: 503 DYVKVSEPIYDYPPKGHEAPVAEPKRISPTEAAQ 536
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 297 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 145
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 297 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 145
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 297 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 145
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 28.3 bits (60), Expect = 9.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 297 TSTTAPSSCRPSVAFRWQGW-TKANVCPTCFPERKD*RGRNGDTANVTSHGS 145
TST A S C S WQ W T C +C +++ R N T GS
Sbjct: 2804 TSTAAASDCSTSTWNAWQEWSTCTETCGSCGTQQRF-RSCNKPVDTCTCSGS 2854
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,047,557
Number of Sequences: 27780
Number of extensions: 369527
Number of successful extensions: 1268
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2626021738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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