Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B05
(958 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 32 0.53
Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical pr... 31 0.92
X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein. 31 0.92
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.92
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 31 1.2
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 2.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 30 2.1
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.1
AC084160-2|AAK39373.1| 376|Caenorhabditis elegans Hypothetical ... 29 3.7
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.9
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 29 4.9
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 29 4.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 4.9
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 29 6.5
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 6.5
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.5
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 28 8.6
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 28 8.6
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 8.6
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 28 8.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.6
AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical ... 28 8.6
AF039650-1|AAC14022.3| 607|Caenorhabditis elegans acetylcholine... 28 8.6
AC024743-1|AAK68402.2| 177|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Frame = +1
Query: 109 FLCL----FVASLYANETSVSDSKLEDDLYNSILVADYDHSVE---KSKQIYEDKKSEV 264
FLCL + L N++ + S E D Y ADYD +E + ++ Y DKKSE+
Sbjct: 241 FLCLQRESLIRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299
>Z68221-5|CAJ30235.1| 416|Caenorhabditis elegans Hypothetical
protein W09C2.1b protein.
Length = 416
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +2
Query: 158 PTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPTSYG 337
P P ++ I +T S++ +++P+ + T T A S S ++S ++ + STP +
Sbjct: 137 PQPITQNIISTVSNVQ-SSVPINNSQPLTPTGLAGCSTSSGSSSASSSSANSTSTPKNTI 195
Query: 338 SKAPKISSGSASLFEF 385
SKA + SSG A+ +F
Sbjct: 196 SKANR-SSGGANNSQF 210
>Z68221-4|CAJ30234.1| 488|Caenorhabditis elegans Hypothetical
protein W09C2.1a protein.
Length = 488
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +2
Query: 158 PTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPTSYG 337
P P ++ I +T S++ +++P+ + T T A S S ++S ++ + STP +
Sbjct: 209 PQPITQNIISTVSNVQ-SSVPINNSQPLTPTGLAGCSTSSGSSSASSSSANSTSTPKNTI 267
Query: 338 SKAPKISSGSASLFEF 385
SKA + SSG A+ +F
Sbjct: 268 SKANR-SSGGANNSQF 282
>X57834-1|CAA40967.1| 416|Caenorhabditis elegans elt-1 protein.
Length = 416
Score = 31.5 bits (68), Expect = 0.92
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +2
Query: 158 PTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPTSYG 337
P P ++ I +T S++ +++P+ + T T A S S ++S ++ + STP +
Sbjct: 137 PQPITQNIISTVSNVQ-SSVPINNSQPLTPTGLAGCSTSSGSSSASSSSANSTSTPKNTI 195
Query: 338 SKAPKISSGSASLFEF 385
SKA + SSG A+ +F
Sbjct: 196 SKANR-SSGGANNSQF 210
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.5 bits (68), Expect = 0.92
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 874 PPFXPXPKXPXPPPXXSXPXPXXPLXXP 957
PP P P P PPP P P P P
Sbjct: 59 PPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +2
Query: 89 DENRSSYSCVFSWRLC--MP--TKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRTRR 256
D N + + W+ C +P TKP + TP + T T S+ TT + T T
Sbjct: 236 DPNTLNIGAKYEWKKCGLVPETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTV 295
Query: 257 AKSSQMS*TNSYETTR*TAWSTPTSYGSKAPKISS 361
+++ + + S TT T T T + P +S
Sbjct: 296 TSTTEPTTSTSTPTTT-TTMQTTTPSTTSTPTTTS 329
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 133 LYANETSVSDSKLEDDLYNSILVADYDHSVEK--SKQIYE-DKKSEVITNVVNKLIRNNK 303
+YA S D LE DL+N + +Y+H + K +++++ KK E NV+N+ I
Sbjct: 318 MYAQSDSSLDHLLEWDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIHRRD 377
Query: 304 MN 309
++
Sbjct: 378 VS 379
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 143 TKPQSPTPNSKTIF--TTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAW 316
T +PT ++T TT ++ P TT P +T T AK+++ + T + +TT+ T+
Sbjct: 254 TTTTTPTTTTQTTTKPTTTTTTPTTT-PTTTTTPTTTTTTAKTTKST-TTTTKTTKTTST 311
Query: 317 STPTSYGSKAP 349
T T+ K P
Sbjct: 312 PTTTTTTPKTP 322
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +1
Query: 817 PXGXXSPTXXPGGXXXFXTPPFXPXPKXPXPPPXXSXPXP 936
P G P PGG PP P + P PPP P P
Sbjct: 804 PGGPRPPYPYPGGP----VPPGPPQNRMPPPPPAQGAPSP 839
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/83 (24%), Positives = 35/83 (42%)
Frame = +2
Query: 83 AKDENRSSYSCVFSWRLCMPTKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAK 262
AK E++ + S + T + P +T + +PITT+PL +T T +
Sbjct: 346 AKSEDKMTLSKTAATETTQQTTEVTDGPEKETTKNVSIEIPITTVPLVETTSTTSTASKE 405
Query: 263 SSQMS*TNSYETTR*TAWSTPTS 331
S T + T + ST ++
Sbjct: 406 SDGFHTTLKLKVTTADSDSTESA 428
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 816 PPWSXXPNPXPWGXKXXXNXXXPPXPXXPXPXPXXFGPXXPXAP 947
PP P P P G K PP P P P GP P P
Sbjct: 144 PPGPAGP-PGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGP 186
>AC084160-2|AAK39373.1| 376|Caenorhabditis elegans Hypothetical
protein Y73B3B.1 protein.
Length = 376
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 145 ETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKS 258
+ ++SD K+ DL +SI DHS+ KS + EDK S
Sbjct: 276 DPAISDGKVVLDLIDSIKPNVIDHSLVKSGKSNEDKMS 313
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 131 LCMPTKPQ-SPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR* 307
+C P+KP+ S T + T TT ++ P TT +T T ++ + T + TT
Sbjct: 77 VCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPT--TTTTTPTTTTTTPTTTT 134
Query: 308 TAWSTP 325
T STP
Sbjct: 135 TTRSTP 140
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 95 NRSSYSCVFSWRLCMPTKPQSPTPNSK--TIFTTASSLPITTIPLKRANRSTR 247
N++ Y CV P P PTP + ++F LP+ + +++ N +
Sbjct: 86 NQTEYECVCMRPYSSPHSPVRPTPAAPDCSVFIKTDDLPVVDMRMRQVNTEAK 138
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 95 NRSSYSCVFSWRLCMPTKPQSPTPNSK--TIFTTASSLPITTIPLKRANRSTR 247
N++ Y CV P P PTP + ++F LP+ + +++ N +
Sbjct: 86 NQTEYECVCMRPYSSPHSPVRPTPAAPDCSVFIKTDDLPVVDMRMRQVNTEAK 138
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 816 PPWSXXPNPXPWGXKXXXNXXXPPXPXXPXPXPXXFGPXXPXAP 947
P P P P G + PP P P P + P P P
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 823 GXXSPTXXPGGXXXFXTPPFXPXPKXPXPPPXXSXPXPXXP 945
G P PGG PP P P PPP P P P
Sbjct: 740 GGPPPPPPPGGL-----PPISGGPPPPPPPPGGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 823 GXXSPTXXPGGXXXFXTPPFXPXPKXPXPPPXXSXPXPXXP 945
G P PGG PP P P PPP P P P
Sbjct: 740 GGPPPPPPPGGL-----PPISGGPPPPPPPPGGCPPPPPPP 775
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 816 PPWSXXPNPXPWGXKXXXNXXXPPXPXXPXPXPXXFGPXXPXAP 947
P P P P G + PP P P P + P P P
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 95 NRSSYSCVFSWRLCMPTKPQSPTPNSK--TIFTTASSLPITTIPLKRANRSTR 247
N++ Y CV P P PTP + ++F LP+ + +++ N +
Sbjct: 86 NQTEYECVCMRPYSSPHSPVRPTPAAPDCSVFIKTDDLPVVDMRMRQVNTEAK 138
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 95 NRSSYSCVFSWRLCMPTKPQSPTPNSK--TIFTTASSLPITTIPLKRANRSTR 247
N++ Y CV P P PTP + ++F LP+ + +++ N +
Sbjct: 86 NQTEYECVCMRPYSSPHSPVRPTPAAPDCSVFIKTDDLPVVDMRMRQVNTEAK 138
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 823 GXXSPTXXPGGXXXFXTPPFXPXPKXPXPPPXXSXPXPXXP 945
G P PGG PP P P PPP P P P
Sbjct: 323 GGPPPPPPPGGL-----PPISGGPPPPPPPPGGCPPPPPPP 358
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -3
Query: 956 GXXRGXXGXGXEXXG-GGXGXXGXGXXGGVXXXFXPPGXXVGXXXPXG 816
G G G G G GG G G G GG + P G G P G
Sbjct: 190 GGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGG 237
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 847 PGGXXXFXTPPFXPXPKXPXPPPXXSXPXPXXPLXXP 957
PG PP P P P P S P P P+ P
Sbjct: 126 PGPAVPAVIPPVVTQPIVPPPVPEVSEPVPEPPIPAP 162
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
Frame = +3
Query: 816 PPWSXXPNPX---PWGXKXXXNXXXPPXPXXPXP 908
PPW P P PW + PP P P P
Sbjct: 57 PPWDRPPPPWRRPPWHRRPPWGLPPPPPPPEPEP 90
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 874 PPFXPXPKXPXPPPXXSXPXP 936
PP P P P PPP S P P
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 874 PPFXPXPKXPXPPPXXSXPXP 936
PP P P P PPP S P P
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 155 SPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPTSY 334
S + +S + +TAS+ ++ ++ S+ + + SS S T+S +TT + ST +S
Sbjct: 40 SDSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSSTTSSD 99
Query: 335 GSKAPKISSGSAS 373
S SS S S
Sbjct: 100 SSTTSSNSSSSTS 112
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 143 TKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAWST 322
T + TP T T +S TT+ ++ T T S+ S T T+ T+ T
Sbjct: 514 TATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQT 573
Query: 323 PTSY-GSKAPKISS 361
T++ G+ A ++S
Sbjct: 574 TTTHVGAPASSVAS 587
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 143 TKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAWST 322
T + TP T T +S TT+ ++ T T S+ S T T+ T+ T
Sbjct: 355 TATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQT 414
Query: 323 PTSY-GSKAPKISS 361
T++ G+ A ++S
Sbjct: 415 TTTHVGAPASSVAS 428
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 113 CVFSWRLCMPTKPQSPTPN-SKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNS 289
C + R T +PT + TI T+ +++ TT+ +A +T+T + ++ T +
Sbjct: 198 CKYCPRETTSTTTVTPTTTKAATIKTSTTTVTPTTVTTTKAPTTTKTSTSTTTPKFTTTT 257
Query: 290 YETTR*TAWSTPTSYGSKAP 349
+TT+ ++PTS + P
Sbjct: 258 IQTTK-KITTSPTSTTASIP 276
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 143 TKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSYETTR*TAWST 322
T + TP T T +S TT+ ++ T T S+ S T T+ T+ T
Sbjct: 395 TATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSPQT 454
Query: 323 PTSY-GSKAPKISS 361
T++ G+ A ++S
Sbjct: 455 TTTHVGAPASSVAS 468
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = -1
Query: 580 VHNLEVGHXGXLTXRNELPADFWTRLVLAIAVGKSAIVAVLIVQRQSETVAL---VHQLN 410
VHNL V T L D W LAI GK + +++ + QSE+ + H L
Sbjct: 308 VHNLRVSEMRIQTVAWNLTGD-W----LAIGCGKGSTAQLVVWEWQSESYVMKQQAHSLR 362
Query: 409 VVFCEYKSE 383
+ EY +
Sbjct: 363 ITTAEYSPD 371
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 871 TPPFXPXPKXPXPPPXXSXPXPXXPLXXP 957
+PP P P+ P PP S P P+ P
Sbjct: 137 SPPPPPPPRVPRTPPPRSPPPRRPPMTPP 165
>AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical
protein Y48B6A.8 protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -1
Query: 670 NPWTLWTP*AXXYGSGLLEXANVKY*LXXXVHNLEVGHXGXLTXRNELPADFWT 509
NPW WT G++ ++Y +HN G+ +E DFWT
Sbjct: 463 NPWPKWT--------GVMHGYEIEYVFGVPLHNTTAGYTKEEMDVSEKVIDFWT 508
>AF039650-1|AAC14022.3| 607|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -1
Query: 670 NPWTLWTP*AXXYGSGLLEXANVKY*LXXXVHNLEVGHXGXLTXRNELPADFWT 509
NPW WT G++ ++Y +HN G+ +E DFWT
Sbjct: 463 NPWPKWT--------GVMHGYEIEYVFGVPLHNTTAGYTKEEMDVSEKVIDFWT 508
>AC024743-1|AAK68402.2| 177|Caenorhabditis elegans Hypothetical
protein Y104H12BR.1 protein.
Length = 177
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 145 ETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKS 258
+ ++SD K+ DL ++I DHS+ KS + EDK S
Sbjct: 108 DPAISDGKVVLDLIDAIKPNVIDHSLVKSGKSNEDKMS 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,977,917
Number of Sequences: 27780
Number of extensions: 302865
Number of successful extensions: 1683
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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