Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B04
         (960 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.1  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    22   7.2  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    22   7.2  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    22   7.2  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    22   7.2  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    22   7.2  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    22   7.2  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    22   7.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   7.2  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   7.2  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   7.2  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   7.2  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   7.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   7.2  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   7.2  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    22   7.2  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   7.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   9.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/34 (32%), Positives = 11/34 (32%)
 Frame = +1

Query: 850 PXLPPXGRXXXPPXXXPPPPRXXPPXXXXGGPPP 951
           P   P      P    PP P   PP     G PP
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 126 TPFPPRFIPPDMYRLRPPPNPR 147


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 126 TPFPPRFIPPDMYRLRPPPNPR 147


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 126 TPFPPRFIPPDMYRLRPPPNPR 147


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 126 TPFPPRFIPPDMYRLRPPPNPR 147


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 126 TPFPPRFIPPDMYRLRPPPNPR 147


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 126 TPFPPRFIPPDMYRLRPPPNPR 147


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 127 PFPPRFIPPDMYRLRPPP 144



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 126 TPFPPRFIPPDMYRLRPPPNPR 147


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 375 TPFPPRFIPPDMYRLRPPPNPR 396


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 375 TPFPPRFIPPDMYRLRPPPNPR 396


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 375 TPFPPRFIPPDMYRLRPPPNPR 396


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 375 TPFPPRFIPPDMYRLRPPPNPR 396


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 375 TPFPPRFIPPDMYRLRPPPNPR 396


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 375 TPFPPRFIPPDMYRLRPPPNPR 396


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 375 PFPPRFIPPDMYRLRPPP 392



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 374 TPFPPRFIPPDMYRLRPPPNPR 395


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 360 PFPPRFIPPDMYRLRPPP 377



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 359 TPFPPRFIPPDMYRLRPPPNPR 380


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 898 PPPPRXXPPXXXXGGPPP 951
           P PPR  PP      PPP
Sbjct: 376 PFPPRFIPPDMYRLRPPP 393



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 607 SPXPPKRXPXXXFSPXAPPPPR 672
           +P PP+  P   +    PP PR
Sbjct: 375 TPFPPRFIPPDMYRLRPPPNPR 396


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 9/26 (34%), Positives = 10/26 (38%)
 Frame = -2

Query: 725 GGAXPXXGGGGXIFXXXXRGGGGAXG 648
           GG      GG  +      GGGG  G
Sbjct: 28  GGVVTGASGGSIVVGANNGGGGGGLG 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,554
Number of Sequences: 438
Number of extensions: 3640
Number of successful extensions: 38
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31565079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)