Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A23
(951 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 2.8
Z78539-1|CAB01727.1| 350|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical ... 29 4.9
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 29 4.9
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.5
AC006680-5|AAK72301.2| 300|Caenorhabditis elegans Serpentine re... 29 6.5
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 950 GGGXGXGXXGXKGGGRWGCX*XGG 879
GGG G G G GGG GC GG
Sbjct: 160 GGGCGGGGGGCGGGGGGGCGGGGG 183
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 950 GGGXGXGXXGXKGGGRWGCX*XGG 879
GGG G G G GGG GC GG
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGG 97
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 950 GGGXGXGXXGXKGGGRWGCX*XGG 879
GGG G G G GGG GC GG
Sbjct: 138 GGGCGGGGGGGCGGGGGGCGGGGG 161
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 950 GGGXGXGXXGXKGGGRWG 897
GGG G G G GGG WG
Sbjct: 41 GGGGGPGGWGNNGGGGWG 58
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 947 GGXGXGXXGXKGGGRWGCX*XGG 879
GG G G G +GGG WG GG
Sbjct: 53 GGGGWGRGGGRGGGDWGGNNGGG 75
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 947 GGXGXGXXGXKGGGRWGCX*XGG 879
GG G G G GGG WG GG
Sbjct: 142 GGDGRGPPGSNGGGDWGGNGGGG 164
>Z78539-1|CAB01727.1| 350|Caenorhabditis elegans Hypothetical
protein C31E10.1 protein.
Length = 350
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 359 HKRWKTASIFSAVKLA*FFHLYQVAL*-FVCANCYLQANKSQMLTAM*LLSLTNDVPSI 186
H WKT + +++ F ++ V F C NC LQA + + SL + V SI
Sbjct: 208 HPHWKTFLVMTSIYTITFVSIFSVIFCGFKCYNCILQAMSITTVQSKISKSLQHHVKSI 266
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 950 GGGXGXGXXGXKGGGRWGCX*XGG 879
GGG G G G GGG GC GG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGG 115
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 950 GGGXGXGXXGXKGGGRWGCX*XGG 879
GGG G G G GGG GC GG
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGG 115
>AF039047-9|AAB94228.1| 303|Caenorhabditis elegans Hypothetical
protein K11D12.8 protein.
Length = 303
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +1
Query: 370 LKIHLRAKNKFVKIFFALDLEQNVTQINFV*PDYNRVFFFKLITI*KSGSVLCIXLYVCX 549
+KIH N + I+F FV Y F F ++ K I + +
Sbjct: 207 VKIHRFPYNFEISIYFFSQTNFKANYSFFVVFFYLLFFIFPVLKKPKLLQDRIISILLLQ 266
Query: 550 KISIYVFDYXLKLFVNCRXYLNT 618
+SI++ +Y L L + C Y NT
Sbjct: 267 GVSIFLNNYCLSLIITCILYNNT 289
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 91 VASSXDINFRSVLCEFQCR*APVDSFQGGSTIIDGT 198
V S ++FRS+L E C P F GGS GT
Sbjct: 14 VGSVEQLSFRSILIERACEKRPELDFCGGSASASGT 49
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 950 GGGXGXGXXGXKGGGRWGCX*XGG 879
GGG G G GGG WG GG
Sbjct: 65 GGGRGGGWGNNGGGGNWGGNGGGG 88
>AC006680-5|AAK72301.2| 300|Caenorhabditis elegans Serpentine
receptor, class x protein60 protein.
Length = 300
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Frame = -1
Query: 492 FKKKNT----IVIWLYEINLCNVLFQIQCE-KYFDKFVF 391
F +KNT I++W++E+ L V +QI C Y ++ F
Sbjct: 115 FSRKNTSSIIILLWIFEVALAIVFYQILCHVAYLEEIHF 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,463,666
Number of Sequences: 27780
Number of extensions: 277368
Number of successful extensions: 828
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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