Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A22
(1121 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 34 0.18
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 34 0.24
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 33 0.55
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 33 0.55
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.55
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 31 2.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.6
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 3.9
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 3.9
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 3.9
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 3.9
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 5.2
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 29 5.2
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 6.8
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P PPPP PP P PP P P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P PPPP PP P PP P P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 31.9 bits (69), Expect = 0.97
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 403 PPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPP P PPPP+PP P PP P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPP P PPPP PP P PP P P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PP P P PPPP PP P PP P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRP 531
PPPP P PPPP PP P PP P
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPP-PPPPPPPPAPPPPPPPPPPPPP 432
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.9 bits (74), Expect = 0.24
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +1
Query: 394 AXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
A PPP P A PPPP PP GGPP P P
Sbjct: 123 APSPPPPPTSPATRAPPPPPPIAPATGGPPPP-PPIAPATGGPPPPPP 169
Score = 31.9 bits (69), Expect = 0.97
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP PPP PP GGPP P P
Sbjct: 111 PPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPP 156
Score = 30.3 bits (65), Expect = 2.9
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
P A PPPP P A PP PP P PP P P
Sbjct: 154 PPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPP 209
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.1 bits (72), Expect = 0.42
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P PPPP PP P P P P
Sbjct: 162 PPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPP 207
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
P A P PP P PPPP PP P P P P
Sbjct: 168 PPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYP 223
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 95 PPPPYPPYPPPPPYPPPPNP 114
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/50 (30%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAF----RXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P + PPPP PP P P P P
Sbjct: 95 PPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSP 144
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 32.7 bits (71), Expect = 0.55
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP P PPPP PP G PP P P
Sbjct: 714 PPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPP 759
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 32.7 bits (71), Expect = 0.55
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP PGG P P P
Sbjct: 196 PPPPPPPPPGFPGGAPPPPP 215
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP G PP P P
Sbjct: 197 PPPPPPPPGFPGGAPPPPPP 216
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 32.7 bits (71), Expect = 0.55
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 394 AXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
A PPP P PPPP PP G PP P P
Sbjct: 289 APVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 400 PPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPPP PPPP PP PP P P
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 403 PPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
PPP P A PPPP P P PP P P
Sbjct: 50 PPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAP 94
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P GPP+P P
Sbjct: 664 PPPPPPPGGGVP-GPPKPPP 682
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.1 bits (57), Expect(2) = 2.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRP 531
PPPP PP P PP P
Sbjct: 868 PPPPPPPPPPPPPPPPPP 885
Score = 21.8 bits (44), Expect(2) = 2.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 370 PXARARXXAXPPPPXP 417
P R R PPPP P
Sbjct: 860 PRPRPRRPPPPPPPPP 875
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 692 PPPPPPPPPPQPSTPPPPPP 711
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 684 PPPPPPPPPPPPPPPPPPQP 703
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +1
Query: 478 PPPPR--PPXRXXPGGPPRPXP 537
PPPPR PP P GPP P P
Sbjct: 1270 PPPPRMQPPGPPGPPGPPGPQP 1291
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 1160 PPPPPPPPPSSPSPPPPPPP 1179
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 1162 PPPPPPPSSPSPPPPPPPPP 1181
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 466 RXXXPPPPRPPXRXXPGGPPRPXP 537
R PPPP PP P P P P
Sbjct: 1153 RDQIPPPPPPPPPPPPSSPSPPPP 1176
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 3.9
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +1
Query: 394 AXPPPPX--PXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGG---PPRPXP 537
A PPPP P A + PPP PP R P G PP P P
Sbjct: 340 APPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPPP 392
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP G PP P P
Sbjct: 662 PPPPPPPGGQAGGAPPPPPP 681
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP GG P P P
Sbjct: 661 PPPPPPPPGGQAGGAPPPPP 680
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 3.9
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +1
Query: 394 AXPPPPX--PXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGG---PPRPXP 537
A PPPP P A + PPP PP R P G PP P P
Sbjct: 252 APPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSGKINPPPPPP 304
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.9 bits (64), Expect = 3.9
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 215 PPPPPPPPSPSPPRPPPPPP 234
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 216 PPPPPPPSPSPPRPPPPPPP 235
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPPRPP P PP P P
Sbjct: 206 PPPPRPPPSPPP-PPPPPSP 224
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 464 PPPPPPPPPPPPPPPPPPPP 483
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPP 484
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 466 PPPPPPPPPPPPPPPPPPPP 485
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 467 PPPPPPPPPPPPPPPPPPPP 486
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 468 PPPPPPPPPPPPPPPPPPPP 487
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 470 PPPPPPPPPPPPPPPPPPFP 489
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 472 PPPPPPPPPPPPPPPPFPPP 491
Score = 29.1 bits (62), Expect = 6.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 475 PPPPPPPPPPPPPFPPPPPP 494
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 478 PPPPRPPXRXXPGGPPRPXP 537
PPPP PP P PP P P
Sbjct: 424 PPPPPPPAPLPPPPPPPPQP 443
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/56 (30%), Positives = 19/56 (33%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRPXP 537
P + + PPPP P R PPPP PP PP P P
Sbjct: 15 PGSVSNNLLRPPPPPPTRPFERNIHPRTEPRDRERPPPPP-PPRFYDNDIPPPPPP 69
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.1 bits (62), Expect = 6.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 370 PXARARXXAXPPPPXPXXXXXXXXXXXXXXAFRXXXPPPPRPPXRXXPGGPPRP 531
P A A PPPP P A PPPP P P PP P
Sbjct: 270 PIPSASQNATPPPPPPPPSNTPGMF-----ASSGFQPPPPPPTDFAPPPPPPEP 318
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.150 0.567
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,411,772
Number of Sequences: 59808
Number of extensions: 94685
Number of successful extensions: 1113
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3438643970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -