Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A21
(963 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 83 3e-16
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 83 3e-16
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 80 2e-15
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 80 2e-15
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 80 2e-15
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 72 5e-13
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 72 5e-13
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 36 0.043
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 33 0.40
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 33 0.40
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 32 0.70
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 32 0.70
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 31 0.92
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 30 2.1
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 30 2.1
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 30 2.1
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 8.6
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 83.0 bits (196), Expect = 3e-16
Identities = 50/145 (34%), Positives = 69/145 (47%)
Frame = +2
Query: 182 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 362 XXXCGKPKNIDDANEDTIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVNDX 541
++D NED ++ V + ER+ LE E +D+ YIV++KD EI+ L VND
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 542 XGQFVKPTLKKVSPYENXFAXSRRR 616
G+FVKPTLKKVS E F +++
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKK 158
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 83.0 bits (196), Expect = 3e-16
Identities = 50/145 (34%), Positives = 69/145 (47%)
Frame = +2
Query: 182 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 362 XXXCGKPKNIDDANEDTIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVNDX 541
++D NED ++ V + ER+ LE E +D+ YIV++KD EI+ L VND
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 542 XGQFVKPTLKKVSPYENXFAXSRRR 616
G+FVKPTLKKVS E F +++
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKK 158
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Frame = +2
Query: 188 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 368 XCGKPKNIDDANED-TIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVNDXX 544
++D N+ + + D R+ LE+EKFD+ + V + + EI+ L QVND
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 545 GQFVKPTLKKVSPYENXFAXSRRRPXNSTXVTN*RSXKR 661
G+FVKPTLKKVS Y+N F S S N + K+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKK 189
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = +2
Query: 182 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 362 XXXCGKPKNIDDANED-TIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVND 538
N+D ++ ++ + D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 539 XXGQFVKPTLKKVSPYENXFAXS 607
G+FVKP+LKKVS Y+N F S
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKS 159
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/159 (32%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Frame = +2
Query: 188 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 368 XCGKPKNIDDANED-TIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVNDXX 544
++D N+ + + D R+ LE+EKFD+ + V + + EI+ L QVND
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 545 GQFVKPTLKKVSPYENXFAXSRRRPXNSTXVTN*RSXKR 661
G+FVKPTLKKVS Y+N F S S N + K+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVVKK 189
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = +2
Query: 182 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 362 XXXCGKPKNIDDANED-TIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVND 538
N+D ++ ++ + D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 539 XXGQFVKPTLKKVSPYENXFAXS 607
G+FVKP+LKKVS Y+N F S
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKS 159
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 72.1 bits (169), Expect = 5e-13
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 182 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 362 XXXCGKPKNIDDANEDT-IKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVND 538
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 539 XXGQFVKPTLKKVSPYENXF 598
G+FVKP+LKKVS Y+N F
Sbjct: 149 LRGKFVKPSLKKVSKYDNKF 168
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 72.1 bits (169), Expect = 5e-13
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 182 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 361
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 362 XXXCGKPKNIDDANEDT-IKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQVND 538
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 539 XXGQFVKPTLKKVSPYENXF 598
G+FVKP+LKKVS Y+N F
Sbjct: 149 LRGKFVKPSLKKVSKYDNKF 168
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 35.9 bits (79), Expect = 0.043
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 386 NIDDANEDTIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQ 529
N + + +K + H+RI +LE EK+DLE +R++ ++ LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 377 KPKNIDDANEDTIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQ 529
K +++ + +K H RI +LE EK+DLE +R++ ++ LN +
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 175
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.40
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 377 KPKNIDDANEDTIKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQ 529
K +++ + +K H RI +LE EK+DLE +R++ ++ LN +
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNER 279
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 413 IKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQ 529
+K + H+RI +LE +K+DLE +R++ ++ LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 413 IKXVCXDYHERIARLEDEKFDLEYIVKRKDMEISXLNSQ 529
+K + H+RI +LE +K+DLE +R++ ++ LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 386 NIDDANEDTIKXVCXDYHERIARLEDEKFDLEYIVKRKDME 508
N + + +K + H+RI +LE EK+DLE +R++ +
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYD 249
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 440 ERIARLEDEKFDLEYIVKRKDMEISXLNSQVND 538
E I L K + E ++K+KD+E+S + S++ D
Sbjct: 1074 ELIEELNRHKHEQEQVIKKKDIELSSIQSRLED 1106
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 437 HERIARLEDEKFDLEYIVKRKDMEISXLNSQ 529
H RI +LE EK+DLE +R+D ++ L+ +
Sbjct: 240 HARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 437 HERIARLEDEKFDLEYIVKRKDMEISXLNSQ 529
H RI +LE EK+DLE +R+D ++ L+ +
Sbjct: 240 HARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 883 PPPSSPXCYXPXISXLXLSPXPAPPXP 963
PPP SP C P + P P PP P
Sbjct: 243 PPPPSPVCMPPPPPPCPM-PIPCPPPP 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,820,763
Number of Sequences: 27780
Number of extensions: 215326
Number of successful extensions: 557
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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