Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A20
(944 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 1.00
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.0
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 5.3
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 5.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 9.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.3
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.0 bits (52), Expect = 1.00
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 150 SRERLGFRTXRRGQPKRK*LTSAFRSYLSSYSN 52
S+ER +T R +RK ++S +Y+S+ SN
Sbjct: 301 SKERSRDKTERERSKERKIISSLSNNYISNISN 333
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 16 THYREFLRFDHSVTVTRKIR 75
T EF+R HS ++TR IR
Sbjct: 112 TTSNEFIRIHHSGSITRSIR 131
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 16 THYREFLRFDHSVTVTRKIR 75
T EF+R HS ++TR IR
Sbjct: 112 TTSNEFIRIHHSGSITRSIR 131
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 16 THYREFLRFDHSVTVTRKIR 75
T EF+R HS ++TR IR
Sbjct: 51 TTSNEFIRIHHSGSITRSIR 70
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 770 PXPPPPPP 793
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 22.6 bits (46), Expect = 5.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 724 PPXPXPPPXP 753
PP P PPP P
Sbjct: 338 PPKPAPPPPP 347
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 770 PXPPPPPP 793
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 770 PXPPPPPP 793
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 5.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 150 SRERLGFRTXRRGQPKRK*LTSAFRSYLSSYSN 52
S+ER + R +RK ++S +Y+S+ SN
Sbjct: 63 SKERSRDKRERERSKERKIISSLSNNYISNISN 95
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 5.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 150 SRERLGFRTXRRGQPKRK*LTSAFRSYLSSYSN 52
S+ER + R +RK ++S +Y+S+ SN
Sbjct: 63 SKERSRDKRERERSKERKIISSLSNNYISNISN 95
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 9.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 804 GXXXGGGGGGXG 769
G GGGGGG G
Sbjct: 42 GANNGGGGGGLG 53
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.3
Identities = 12/41 (29%), Positives = 12/41 (29%)
Frame = +1
Query: 745 PXPXXXPXXXPXXPXXXXXPPXXXXXPPXXXPXPXPXXXXP 867
P P P P P PP PP P P P
Sbjct: 21 PGPQPSPHQSPQAP-QRGSPPNPSQGPPPGGPPGAPPSQNP 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.147 0.530
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,854
Number of Sequences: 438
Number of extensions: 10364
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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