BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP01_F_A19 (880 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 71 2e-13 SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 58 2e-09 SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 54 2e-08 SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 43 5e-05 SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 43 7e-05 SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 41 3e-04 SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 35 0.018 SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 32 0.094 SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 31 0.29 SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 3.5 SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 6.1 SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 8.1 >SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 492 Score = 71.3 bits (167), Expect = 2e-13 Identities = 31/66 (46%), Positives = 50/66 (75%), Gaps = 1/66 (1%) Frame = +1 Query: 172 TEENVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 348 ++E+++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K A + + ++S + +A Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVA 411 Query: 349 KVDATQ 366 K+DAT+ Sbjct: 412 KIDATE 417 Score = 70.1 bits (164), Expect = 4e-13 Identities = 32/78 (41%), Positives = 47/78 (60%) Frame = +1 Query: 193 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 372 ++K +I+ + ++V+FYAPWCGHCK+LAPEY AA +L E+ I L +VD T+E Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEG 84 Query: 373 DLXRELRCTRIPDSQILQ 426 DL E P + + Sbjct: 85 DLCSEYSIRGYPTLNVFK 102 >SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 359 Score = 58.0 bits (134), Expect = 2e-09 Identities = 32/98 (32%), Positives = 49/98 (50%) Frame = +1 Query: 115 VLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 294 +L F AL L V +++ L T+ ++ + L+EFYA WCGHCKSLAP Sbjct: 5 LLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKSLAPV 60 Query: 295 YAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIP 408 Y + L E+ + + + K+DA D+ + T P Sbjct: 61 YEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFP 97 Score = 56.0 bits (129), Expect = 7e-09 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%) Frame = +1 Query: 181 NVLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 357 NV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y + K+ + E +++ K++ Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKIN 199 Query: 358 ATQEQDLXR 384 A D+ R Sbjct: 200 ADVFADIGR 208 >SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 363 Score = 54.4 bits (125), Expect = 2e-08 Identities = 29/102 (28%), Positives = 44/102 (43%) Frame = +1 Query: 118 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 297 L +L+ G N + L+ NF + LV FYAPWCG+CK L P Y Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70 Query: 298 AKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPDSQIL 423 K A+ L P+ DA Q + + + + P +++ Sbjct: 71 QKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLV 111 >SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 103 Score = 43.2 bits (97), Expect = 5e-05 Identities = 19/73 (26%), Positives = 38/73 (52%) Frame = +1 Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369 V + F++++ + ++V+F+A WCG CK++AP++ + + S KVD Q Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQL 60 Query: 370 QDLXRELRCTRIP 408 ++ E +P Sbjct: 61 SEIAAEAGVHAMP 73 >SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosaccharomyces pombe|chr 2|||Manual Length = 290 Score = 42.7 bits (96), Expect = 7e-05 Identities = 20/73 (27%), Positives = 41/73 (56%) Frame = +1 Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369 + S ++ + I + Y+ V+ YA WCG CK+++P +++ A+K A + AKV+ ++ Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQ 63 Query: 370 QDLXRELRCTRIP 408 + + L +P Sbjct: 64 RQIASGLGVKAMP 76 >SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccharomyces pombe|chr 2|||Manual Length = 121 Score = 40.7 bits (91), Expect = 3e-04 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%) Frame = +1 Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369 V S ++ T IS + +V+FYA WCG CK L P KL+E+ V+A + Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKF 77 Query: 370 QDLXRELRCTRIPDSQIL-QGMAVLSTIQVVVKLMTS 477 D+ ++ +P + +G + + VK ++S Sbjct: 78 SDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSS 114 >SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr 2|||Manual Length = 244 Score = 34.7 bits (76), Expect = 0.018 Identities = 18/73 (24%), Positives = 33/73 (45%) Frame = +1 Query: 232 EYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPD 411 + IL+ FYAPW CK + + + A++ K++A + D+ +P Sbjct: 21 QIILLNFYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPL 76 Query: 412 SQILQGMAVLSTI 450 ++ G VL+ I Sbjct: 77 FVLIHGAKVLARI 89 >SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces pombe|chr 2|||Manual Length = 726 Score = 32.3 bits (70), Expect = 0.094 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Frame = +1 Query: 193 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQ 366 L+ + E+ +S + +++Y P CG CK L P + K E E S +VD ++ Sbjct: 31 LTDNDLESEVSKGTWF-IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89 Query: 367 EQDLXRELRCTRIPDSQILQGMAVLSTI 450 E +R +P + Q ++ + Sbjct: 90 ELSSCANIRA--VPTLYLYQNGEIVEEV 115 >SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr 1|||Manual Length = 1778 Score = 30.7 bits (66), Expect = 0.29 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -1 Query: 631 EPVERKVLALAELWSEKKPNTITVLASISSLACSADVTSTA 509 +P +K +L + W + + LASISS A SA + ST+ Sbjct: 669 KPTPKKAASLPQFWLSPRSHNTARLASISSFAKSAVMNSTS 709 >SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces pombe|chr 1|||Manual Length = 2244 Score = 27.1 bits (57), Expect = 3.5 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +3 Query: 438 PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGF-FSDQSSARA 608 P DY ++ D + ++ G P++ ++ K ++++ TV VFG F Q ARA Sbjct: 291 PWDYDFTKETYDGL-FISNGPGDPSLMDLVVDRVKRVLESKTVPVFGICFGHQIMARA 347 >SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 3699 Score = 26.2 bits (55), Expect = 6.1 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 362 VASTFASLIGDSSSASFVAALAYSGARDLQW 270 V++ F SL+G S FVA + R L+W Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069 >SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 747 Score = 25.8 bits (54), Expect = 8.1 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -2 Query: 117 NTHCDIIGTFLL 82 NTHCDI+ +FLL Sbjct: 275 NTHCDIVTSFLL 286 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,811,366 Number of Sequences: 5004 Number of extensions: 50955 Number of successful extensions: 148 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 146 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 440481800 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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