Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A19
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 71 2e-13
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 58 2e-09
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 54 2e-08
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 43 5e-05
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 43 7e-05
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 41 3e-04
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 35 0.018
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 32 0.094
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 31 0.29
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 3.5
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 26 6.1
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 8.1
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 71.3 bits (167), Expect = 2e-13
Identities = 31/66 (46%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Frame = +1
Query: 172 TEENVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 348
++E+++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K A + + ++S + +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVA 411
Query: 349 KVDATQ 366
K+DAT+
Sbjct: 412 KIDATE 417
Score = 70.1 bits (164), Expect = 4e-13
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +1
Query: 193 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 372
++K +I+ + ++V+FYAPWCGHCK+LAPEY AA +L E+ I L +VD T+E
Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEG 84
Query: 373 DLXRELRCTRIPDSQILQ 426
DL E P + +
Sbjct: 85 DLCSEYSIRGYPTLNVFK 102
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 58.0 bits (134), Expect = 2e-09
Identities = 32/98 (32%), Positives = 49/98 (50%)
Frame = +1
Query: 115 VLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 294
+L F AL L V +++ L T+ ++ + L+EFYA WCGHCKSLAP
Sbjct: 5 LLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKSLAPV 60
Query: 295 YAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIP 408
Y + L E+ + + + K+DA D+ + T P
Sbjct: 61 YEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFP 97
Score = 56.0 bits (129), Expect = 7e-09
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 181 NVLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 357
NV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y + K+ + E +++ K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKIN 199
Query: 358 ATQEQDLXR 384
A D+ R
Sbjct: 200 ADVFADIGR 208
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 54.4 bits (125), Expect = 2e-08
Identities = 29/102 (28%), Positives = 44/102 (43%)
Frame = +1
Query: 118 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 297
L +L+ G N + L+ NF + LV FYAPWCG+CK L P Y
Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70
Query: 298 AKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPDSQIL 423
K A+ L P+ DA Q + + + + P +++
Sbjct: 71 QKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLV 111
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 43.2 bits (97), Expect = 5e-05
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +1
Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369
V + F++++ + ++V+F+A WCG CK++AP++ + + S KVD Q
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQL 60
Query: 370 QDLXRELRCTRIP 408
++ E +P
Sbjct: 61 SEIAAEAGVHAMP 73
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 42.7 bits (96), Expect = 7e-05
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +1
Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369
+ S ++ + I + Y+ V+ YA WCG CK+++P +++ A+K A + AKV+ ++
Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQ 63
Query: 370 QDLXRELRCTRIP 408
+ + L +P
Sbjct: 64 RQIASGLGVKAMP 76
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 40.7 bits (91), Expect = 3e-04
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +1
Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369
V S ++ T IS + +V+FYA WCG CK L P KL+E+ V+A +
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKF 77
Query: 370 QDLXRELRCTRIPDSQIL-QGMAVLSTIQVVVKLMTS 477
D+ ++ +P + +G + + VK ++S
Sbjct: 78 SDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSS 114
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 34.7 bits (76), Expect = 0.018
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 232 EYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPD 411
+ IL+ FYAPW CK + + + A++ K++A + D+ +P
Sbjct: 21 QIILLNFYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPL 76
Query: 412 SQILQGMAVLSTI 450
++ G VL+ I
Sbjct: 77 FVLIHGAKVLARI 89
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 32.3 bits (70), Expect = 0.094
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 193 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQ 366
L+ + E+ +S + +++Y P CG CK L P + K E E S +VD ++
Sbjct: 31 LTDNDLESEVSKGTWF-IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 367 EQDLXRELRCTRIPDSQILQGMAVLSTI 450
E +R +P + Q ++ +
Sbjct: 90 ELSSCANIRA--VPTLYLYQNGEIVEEV 115
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 631 EPVERKVLALAELWSEKKPNTITVLASISSLACSADVTSTA 509
+P +K +L + W + + LASISS A SA + ST+
Sbjct: 669 KPTPKKAASLPQFWLSPRSHNTARLASISSFAKSAVMNSTS 709
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 438 PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGF-FSDQSSARA 608
P DY ++ D + ++ G P++ ++ K ++++ TV VFG F Q ARA
Sbjct: 291 PWDYDFTKETYDGL-FISNGPGDPSLMDLVVDRVKRVLESKTVPVFGICFGHQIMARA 347
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 362 VASTFASLIGDSSSASFVAALAYSGARDLQW 270
V++ F SL+G S FVA + R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 117 NTHCDIIGTFLL 82
NTHCDI+ +FLL
Sbjct: 275 NTHCDIVTSFLL 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,811,366
Number of Sequences: 5004
Number of extensions: 50955
Number of successful extensions: 148
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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