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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A19
         (880 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po...    71   2e-13
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ...    58   2e-09
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po...    54   2e-08
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc...    43   5e-05
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac...    43   7e-05
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha...    41   3e-04
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c...    35   0.018
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ...    32   0.094
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb...    31   0.29 
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo...    27   3.5  
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces...    26   6.1  
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce...    26   8.1  

>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 492

 Score = 71.3 bits (167), Expect = 2e-13
 Identities = 31/66 (46%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
 Frame = +1

Query: 172 TEENVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 348
           ++E+++VL   NF+ ++   T+ +LVEFYAPWCGHCK+LAP Y K A + + ++S + +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYS-DDSNVVVA 411

Query: 349 KVDATQ 366
           K+DAT+
Sbjct: 412 KIDATE 417



 Score = 70.1 bits (164), Expect = 4e-13
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = +1

Query: 193 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 372
           ++K     +I+  + ++V+FYAPWCGHCK+LAPEY  AA +L  E+  I L +VD T+E 
Sbjct: 27  VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADEL--EKDGISLVEVDCTEEG 84

Query: 373 DLXRELRCTRIPDSQILQ 426
           DL  E      P   + +
Sbjct: 85  DLCSEYSIRGYPTLNVFK 102


>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 359

 Score = 58.0 bits (134), Expect = 2e-09
 Identities = 32/98 (32%), Positives = 49/98 (50%)
 Frame = +1

Query: 115 VLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 294
           +L F   AL  L     V   +++  L      T+ ++ +  L+EFYA WCGHCKSLAP 
Sbjct: 5   LLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKSLAPV 60

Query: 295 YAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIP 408
           Y +    L E+ + + + K+DA    D+  +   T  P
Sbjct: 61  YEELGA-LFEDHNDVLIGKIDADTHSDVADKYHITGFP 97



 Score = 56.0 bits (129), Expect = 7e-09
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 181 NVLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 357
           NV+ L   NF+ V+   +  +LVEFYA WCG+CK LAP Y +   K+ + E  +++ K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY-ETLGKVFKNEPNVEIVKIN 199

Query: 358 ATQEQDLXR 384
           A    D+ R
Sbjct: 200 ADVFADIGR 208


>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 363

 Score = 54.4 bits (125), Expect = 2e-08
 Identities = 29/102 (28%), Positives = 44/102 (43%)
 Frame = +1

Query: 118 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 297
           L     +L+    G       N + L+  NF   +      LV FYAPWCG+CK L P Y
Sbjct: 11  LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70

Query: 298 AKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPDSQIL 423
            K A+ L     P+     DA Q + +  + +    P  +++
Sbjct: 71  QKLASNL-HSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLV 111


>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 103

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +1

Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369
           V   + F++++   + ++V+F+A WCG CK++AP++     + +   S     KVD  Q 
Sbjct: 5   VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF----EQFSNTYSDATFIKVDVDQL 60

Query: 370 QDLXRELRCTRIP 408
            ++  E     +P
Sbjct: 61  SEIAAEAGVHAMP 73


>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
           Txl1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 290

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 20/73 (27%), Positives = 41/73 (56%)
 Frame = +1

Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369
           + S  ++ + I  + Y+ V+ YA WCG CK+++P +++ A+K A  +     AKV+  ++
Sbjct: 6   IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQLASKYASPK--FVFAKVNVDEQ 63

Query: 370 QDLXRELRCTRIP 408
           + +   L    +P
Sbjct: 64  RQIASGLGVKAMP 76


>SPBC12D12.07c |trx2||mitochondrial thioredoxin
           Trx2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 121

 Score = 40.7 bits (91), Expect = 3e-04
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = +1

Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369
           V S  ++ T IS  +  +V+FYA WCG CK L P       KL+E+        V+A + 
Sbjct: 22  VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVNADKF 77

Query: 370 QDLXRELRCTRIPDSQIL-QGMAVLSTIQVVVKLMTS 477
            D+ ++     +P   +  +G  +   +   VK ++S
Sbjct: 78  SDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSS 114


>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 34.7 bits (76), Expect = 0.018
 Identities = 18/73 (24%), Positives = 33/73 (45%)
 Frame = +1

Query: 232 EYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPD 411
           + IL+ FYAPW   CK +   +     + A++       K++A +  D+        +P 
Sbjct: 21  QIILLNFYAPWAAPCKQMNQVF----DQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPL 76

Query: 412 SQILQGMAVLSTI 450
             ++ G  VL+ I
Sbjct: 77  FVLIHGAKVLARI 89


>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 726

 Score = 32.3 bits (70), Expect = 0.094
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = +1

Query: 193 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE--EESPIKLAKVDATQ 366
           L+  + E+ +S   +  +++Y P CG CK L P +     K  E  E S     +VD ++
Sbjct: 31  LTDNDLESEVSKGTWF-IKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89

Query: 367 EQDLXRELRCTRIPDSQILQGMAVLSTI 450
           E      +R   +P   + Q   ++  +
Sbjct: 90  ELSSCANIRA--VPTLYLYQNGEIVEEV 115


>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1778

 Score = 30.7 bits (66), Expect = 0.29
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 631 EPVERKVLALAELWSEKKPNTITVLASISSLACSADVTSTA 509
           +P  +K  +L + W   + +    LASISS A SA + ST+
Sbjct: 669 KPTPKKAASLPQFWLSPRSHNTARLASISSFAKSAVMNSTS 709


>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2244

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 438 PIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGF-FSDQSSARA 608
           P DY   ++  D + ++    G P++     ++ K ++++ TV VFG  F  Q  ARA
Sbjct: 291 PWDYDFTKETYDGL-FISNGPGDPSLMDLVVDRVKRVLESKTVPVFGICFGHQIMARA 347


>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 3699

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 362  VASTFASLIGDSSSASFVAALAYSGARDLQW 270
            V++ F SL+G  S   FVA    +  R L+W
Sbjct: 1039 VSNIFKSLVGSMSCVEFVAEARETINRSLEW 1069


>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 747

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 117 NTHCDIIGTFLL 82
           NTHCDI+ +FLL
Sbjct: 275 NTHCDIVTSFLL 286


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,811,366
Number of Sequences: 5004
Number of extensions: 50955
Number of successful extensions: 148
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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