Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A18
(961 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 167 2e-41
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 160 2e-39
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 155 5e-38
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 154 1e-37
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 87 3e-17
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 9.6
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 28 9.6
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 9.6
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 9.6
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 167 bits (405), Expect = 2e-41
Identities = 82/146 (56%), Positives = 105/146 (71%), Gaps = 2/146 (1%)
Frame = +1
Query: 148 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 321
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 322 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 501
S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 502 GPGTKKVHVIFSYKGKNXLXSKKYIP 579
G TKKVH IF+ KN L KK +P
Sbjct: 148 GYSTKKVHTIFTKNDKNHLI-KKDVP 172
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +2
Query: 710 LPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDK-PEXXPXPXAPXPEXWDXXNXXX 886
LPP +I DP DD P PE +D P+ P P A PE WD
Sbjct: 213 LPPKQIKDP-EAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIPDPDAKKPEDWDDEEDGE 271
Query: 887 XGTPPXIXPPXXKG 928
T P I P KG
Sbjct: 272 W-TAPTIPNPEYKG 284
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 160 bits (388), Expect = 2e-39
Identities = 73/137 (53%), Positives = 100/137 (72%), Gaps = 2/137 (1%)
Frame = +1
Query: 148 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 321
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 322 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 501
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 502 GPGTKKVHVIFSYKGKN 552
G TKK+H+I SY+G+N
Sbjct: 146 GTQTKKLHLILSYQGQN 162
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 155 bits (376), Expect = 5e-38
Identities = 79/156 (50%), Positives = 102/156 (65%), Gaps = 12/156 (7%)
Frame = +1
Query: 148 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 291
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 292 TSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETP 471
TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETP
Sbjct: 85 TSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETP 144
Query: 472 YEIMFGPDICGPGTKKVHVIFSYKGKNXLXSKKYIP 579
Y IMFGPDICG TKKVH I + GKN L KK +P
Sbjct: 145 YSIMFGPDICGYATKKVHAILTKNGKNHLI-KKDVP 179
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 788 PXTXXPEDWDKPEXXPXPXAPXPEXWD 868
P PEDWD E P P PE +D
Sbjct: 228 PEAKKPEDWDDNEYIPDPEDKKPEGYD 254
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 154 bits (373), Expect = 1e-37
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 2/140 (1%)
Frame = +1
Query: 139 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 312
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 313 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 492
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 493 DICGPGTKKVHVIFSYKGKN 552
DICG TKK+H+I SY+G+N
Sbjct: 143 DICGDQTKKLHLILSYQGQN 162
Score = 33.5 bits (73), Expect = 0.26
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Frame = +2
Query: 710 LPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDK-PEXXPXPXAPXPEXWDXXNXXX 886
LPP KI + + DD P PE +D P+ P P PE WD +
Sbjct: 211 LPPRKIKES-NAKKPKDWDDREYIEDPDEVKPEGYDSIPKEIPDPKDKKPESWDDDDDGV 269
Query: 887 XGTPPXIXPPXXKG 928
P I P KG
Sbjct: 270 W-KPRMIPNPEYKG 282
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 86.6 bits (205), Expect = 3e-17
Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Frame = +1
Query: 148 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 327
D F E F D+S+E WV S GK+ K K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIK 77
Query: 328 KF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPD 495
+ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPD 137
Query: 496 ICGPGTKKVHVIFSYKGKNXLXSKKYIPXXKNDVYPTFVPSD 621
CG T KVH I +K + KY+ +P VP D
Sbjct: 138 KCG-STNKVHFILKHKNPK---TGKYVEHHLK--FPPSVPYD 173
Score = 33.1 bits (72), Expect = 0.34
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 788 PXTXXPEDWDKPEXXPXPXAPXPEXWD 868
P PEDWD+ P P A P+ WD
Sbjct: 222 PDDKKPEDWDERAKIPDPDAVKPDDWD 248
Score = 31.1 bits (67), Expect = 1.4
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +2
Query: 722 KIXDP*SPXTXXTXDDXPL-FXTPXTXXPEDW--DKPEXXPXPXAPXPEXWD 868
KI DP + +D P+ PE W D+PE P A PE WD
Sbjct: 235 KIPDPDAVKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIDDPEANKPEDWD 286
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -3
Query: 497 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 354
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -3
Query: 404 QSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPN 225
+S+ L+ N + G+P L GLN +++++ + P+ SSG L FP + N
Sbjct: 738 KSIGALDLSNNQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNN 796
Query: 224 SFPGCSL 204
G L
Sbjct: 797 GLCGIPL 803
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 28.3 bits (60), Expect = 9.6
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 713 PPXKIXDP*SPXTXXTXD-DXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXWDXXNXXXX 889
PP DP P T T P P T P + P P P P P
Sbjct: 6 PPPDGLDP-PPATPPTAAAGTPPLAVPATNTPPN---PATTPTPLTPNPNPSPTLPPPPM 61
Query: 890 GTPPXIXPP 916
TPP + PP
Sbjct: 62 STPPVVAPP 70
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 184 TNHQETSPQRIHHNLSKIMPA-S*QRPVQQLSFSIHS 77
TNH E P+ H LSKI+ A S RP+ +S+ +H+
Sbjct: 41 TNHVERPPKERH--LSKIIAAASGARPLADVSYCVHA 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,846,828
Number of Sequences: 37544
Number of extensions: 452137
Number of successful extensions: 1075
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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