Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A18
(961 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 186 2e-47
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 186 2e-47
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.1
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 28 8.6
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 28 8.6
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 28 8.6
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 28 8.6
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 186 bits (453), Expect = 2e-47
Identities = 83/145 (57%), Positives = 110/145 (75%), Gaps = 1/145 (0%)
Frame = +1
Query: 139 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 318
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 319 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 495
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 496 ICGPGTKKVHVIFSYKGKNXLXSKK 570
ICGP T++VHVI +YKG+N L K+
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKE 155
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/78 (37%), Positives = 31/78 (39%)
Frame = +2
Query: 710 LPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXWDXXNXXXX 889
LP KI DP D+ PEDW+KPE P P A PE WD
Sbjct: 198 LPAKKIKDP-DAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWD-DEMDGE 255
Query: 890 GTPPXIXPPXXKGLXGPK 943
PP I P KG PK
Sbjct: 256 WEPPMIDNPEYKGEWKPK 273
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 186 bits (453), Expect = 2e-47
Identities = 83/145 (57%), Positives = 110/145 (75%), Gaps = 1/145 (0%)
Frame = +1
Query: 139 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 318
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 319 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 495
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 496 ICGPGTKKVHVIFSYKGKNXLXSKK 570
ICGP T++VHVI +YKG+N L K+
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKE 155
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/78 (37%), Positives = 31/78 (39%)
Frame = +2
Query: 710 LPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXWDXXNXXXX 889
LP KI DP D+ PEDW+KPE P P A PE WD
Sbjct: 198 LPAKKIKDP-DAKKPEDWDEREYIDDAEDAKPEDWEKPEHIPDPDAKKPEDWD-DEMDGE 255
Query: 890 GTPPXIXPPXXKGLXGPK 943
PP I P KG PK
Sbjct: 256 WEPPMIDNPEYKGEWKPK 273
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 76.2 bits (179), Expect = 3e-14
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +1
Query: 271 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 441
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ +
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 442 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYK 543
+ + +T Y IMFGPD CG T KVH+IF YK
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYK 199
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/85 (25%), Positives = 25/85 (29%)
Frame = +2
Query: 686 PKRXTGTSLPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXW 865
P G P K P +P T T P+ T P P+ P P P
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 165
Query: 866 DXXNXXXXGTPPXIXPPXXKGLXGP 940
D G P P G GP
Sbjct: 166 DPGEAGTPGRPGTDAAPGSPGPRGP 190
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/85 (25%), Positives = 25/85 (29%)
Frame = +2
Query: 686 PKRXTGTSLPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXW 865
P G P K P +P T T P+ T P P+ P P P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 866 DXXNXXXXGTPPXIXPPXXKGLXGP 940
D G P P G GP
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGP 185
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/85 (25%), Positives = 25/85 (29%)
Frame = +2
Query: 686 PKRXTGTSLPPXKIXDP*SPXTXXTXDDXPLFXTPXTXXPEDWDKPEXXPXPXAPXPEXW 865
P G P K P +P T T P+ T P P+ P P P
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPG 160
Query: 866 DXXNXXXXGTPPXIXPPXXKGLXGP 940
D G P P G GP
Sbjct: 161 DPGEAGTPGRPGTDAAPGSPGPRGP 185
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/75 (26%), Positives = 28/75 (37%)
Frame = -3
Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 254 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 313
Query: 95 FIFDSQYHLLQQKTG 51
+ DS + Q G
Sbjct: 314 YSSDSNSNSNQSPPG 328
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/75 (26%), Positives = 28/75 (37%)
Frame = -3
Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 95 FIFDSQYHLLQQKTG 51
+ DS + Q G
Sbjct: 381 YSSDSNSNSNQSPPG 395
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/75 (26%), Positives = 28/75 (37%)
Frame = -3
Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 95 FIFDSQYHLLQQKTG 51
+ DS + Q G
Sbjct: 381 YSSDSNSNSNQSPPG 395
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/75 (26%), Positives = 28/75 (37%)
Frame = -3
Query: 275 SSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTA 96
+ GS K PAV N NS+ Q+ HE ++ T +N T T
Sbjct: 321 NQGSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQH 380
Query: 95 FIFDSQYHLLQQKTG 51
+ DS + Q G
Sbjct: 381 YSSDSNSNSNQSPPG 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,980,305
Number of Sequences: 27780
Number of extensions: 388600
Number of successful extensions: 1110
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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