Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A17
         (944 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g13710.1 68414.m01611 cytochrome P450 family protein similar ...    32   0.64 
At4g29100.1 68417.m04165 ethylene-responsive family protein cont...    29   4.5  
At5g06900.1 68418.m00779 cytochrome P450 family protein                29   5.9  

>At1g13710.1 68414.m01611 cytochrome P450 family protein similar to
           cytochrome P450 78A1 (SP:P48420) GI:349717 from [Zea
           mays]
          Length = 517

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
 Frame = +3

Query: 234 DLLSNRFGEDEEAPIEVRGDGNLINRLNSLPIE-------NQPFWYLNWKAYEALRKRPQ 392
           ++++  FGE  +   EV G G  + RL S   E       +  FW+L W  ++ +RKR +
Sbjct: 200 NVMTTVFGESYDFD-EVNGKGCFLERLVSEGYELLGIFNWSDHFWFLRWFDFQGVRKRCR 258

Query: 393 TFQQRPNNFI 422
                 N F+
Sbjct: 259 ALVSEVNTFV 268


>At4g29100.1 68417.m04165 ethylene-responsive family protein
           contains similarity to ethylene-inducible ER33 protein
           [Lycopersicon esculentum] gi|5669656|gb|AAD46413
          Length = 407

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -2

Query: 298 LPSPRTSMGASSSSPNLFDSKSVST 224
           LPSP TS  +SSSSP+L ++ ++S+
Sbjct: 67  LPSPATSSSSSSSSPSLPNNPNLSS 91


>At5g06900.1 68418.m00779 cytochrome P450 family protein 
          Length = 507

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 21/85 (24%), Positives = 42/85 (49%)
 Frame = +3

Query: 303 INRLNSLPIENQPFWYLNWKAYEALRKRPQTFQQRPNNFIDRN**RQKKNTSIENHETVA 482
           +N L      ++ FW+L     + L+KR +  + + +  I+R    ++  +S +N    A
Sbjct: 213 LNELAGFFNVSETFWFLKRLDLQGLKKRLKNARDKYDVIIERI--MEEHESSKKN----A 266

Query: 483 TNSSTVLDVRISIFFFRNGKLDLIR 557
           T    +LDV + I+  +N ++ L R
Sbjct: 267 TGERNMLDVLLDIYEDKNAEMKLTR 291


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,625,015
Number of Sequences: 28952
Number of extensions: 326709
Number of successful extensions: 797
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2266029384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)